BAC Information

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BAC

Clone NameB6Ng01-216G15
Chromosome2 (Build37)
Map Location 58,470,842 - 58,646,747
singlet/doubletdoublet
Overlap geneLOC674940, Upp2
Upstream geneGalnt5, A330104H05Rik, LOC667026, Pscdbp, LOC100042926, Acvr1c, LOC667062, Acvr1
Downstream geneBC062650, Pkp4, LOC625354, 2310032F03Rik, LOC100038999, LOC100039016, Tanc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-216G15.bB6Ng01-216G15.g
ACCGA033111GA033112
length390951
definitionB6Ng01-216G15.b B6Ng01-216G15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,646,352 - 58,646,747)(58,470,842 - 58,471,793)
sequence
ccatgtgggacagtcactggatggcctttcttttagtttctcctccaaac
tttgcctctatatctcctcccgtgggtattttgatccccttctaagtagg
accttttacccaaagggaggccctgcctgacaggcttcctgctctttttt
taaaaaaagatttatttattttatttatatgagtacaccgtagctgtctt
cagacacaccagaacagggcattagatctcattacagatggttatgagcc
accatgtggttcctgggaattgaactcaggaccttcagaagtcagtgctc
ttaaactgccgagtcatctctttacctcatcttctcgctcttaatctatc
gttgttttgtggtttgtaatgtgggtggaggggagtgagg
gaattcaactggaagagcagccagtgcttttaaccactgagccatctctc
cagcctctgaagaattataccttgcagaaacaaaacaaagagaagatcct
ttgactttgggcatggggagttgaagtactaacaatggttaagattgaac
taaccatcactgcaaagctttatgttaatgagcagggctggtcaagggga
agcatgaagaaactctgtgcaggggtgatagcagaagtgagggaactaga
agaatagagtgttcccaggaagaacctgctggagaagatgtggtctaaag
atgaagctgtacagatcatctgtcttagagatgagaggccatgctgagta
ccaaaggagcggtcgagaccctggtgaaatgataactccctaaagataac
tcattcttgacccttaacctttcatgaggaacagctaattactgagtttt
tattttgatttgaggaacctattggttctctgtgcacactgggttccttt
ttattacaaatcttgctaattaatggtgtgaaattggttatttttccatt
aaatcaggcatttcttccccctttttattaagaattatttacttaattta
tgtatatgagtagctgtcttcaggcgtgtcagaagagggcatcagatcac
attacatatgtctgtgagccaccatgtagttgttgggaattgaactcaga
acatctggaagagcagtcagtgcccttaaccactgagccatctctccagt
ttctgaaattcttccttttaccggcgtaaagatctatcaaaactaaacca
gcaaaaactgaaaattgtttttttatttttttaaaggtttaaatttaaaa
aaaaaaagtgctgggaggtagcatatagcatgtggcctgtcactgagtat
accttccaggccagaccacagaagttgttgttgttgttgttgttgtgttg
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_58646352_58646747
seq2: B6Ng01-216G15.b_47_442 (reverse)

seq1  CCTCACTCCCCTCCACCCACATTACAAACCACAAAACAACGATAGATTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACTCCCCTCCACCCACATTACAAACCACAAAACAACGATAGATTAA  50

seq1  GAGCGAGAAGATGAGGTAAAGAGATGACTCGGCAGTTTAAGAGCACTGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCGAGAAGATGAGGTAAAGAGATGACTCGGCAGTTTAAGAGCACTGAC  100

seq1  TTCTGAAGGTCCTGAGTTCAATTCCCAGGAACCACATGGTGGCTCATAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAGGTCCTGAGTTCAATTCCCAGGAACCACATGGTGGCTCATAAC  150

seq1  CATCTGTAATGAGATCTAATGCCCTGTTCTGGTGTGTCTGAAGACAGCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGTAATGAGATCTAATGCCCTGTTCTGGTGTGTCTGAAGACAGCTA  200

seq1  CGGTGTACTCATATAAATAAAATAAATAAATCTTTTTTTAAAAAAAGAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGTACTCATATAAATAAAATAAATAAATCTTTTTTTAAAAAAAGAGC  250

seq1  AGGAAGCCTGTCAGGCAGGGCCTCCCTTTGGGTAAAAGGTCCTACTTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGCCTGTCAGGCAGGGCCTCCCTTTGGGTAAAAGGTCCTACTTAGA  300

seq1  AGGGGATCAAAATACCCACGGGAGGAGATATAGAGGCAAAGTTTGGAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGATCAAAATACCCACGGGAGGAGATATAGAGGCAAAGTTTGGAGGA  350

seq1  GAAACTAAAAGAAAGGCCATCCAGTGACTGTCCCACATGGGAATTC  396
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTAAAAGAAAGGCCATCCAGTGACTGTCCCACATGGGAATTC  396

seq1: chr2_58470842_58471793
seq2: B6Ng01-216G15.g_67_1017

seq1  GAATTCAACTGGAAGAGCAGCCAGTGCTTTTAACCACTGAGCCATCTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTGGAAGAGCAGCCAGTGCTTTTAACCACTGAGCCATCTCTC  50

seq1  CAGCCTCTGAAGAATTATACCTTGCAGAAACAAAACAAAGAGAAGATCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTCTGAAGAATTATACCTTGCAGAAACAAAACAAAGAGAAGATCCT  100

seq1  TTGACTTTGGGCATGGGGAGTTGAAGTACTAACAATGGTTAAGATTGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTTTGGGCATGGGGAGTTGAAGTACTAACAATGGTTAAGATTGAAC  150

seq1  TAACCATCACTGCAAAGCTTTATGTTAATGAGCAGGGCTGGTCAAGGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCATCACTGCAAAGCTTTATGTTAATGAGCAGGGCTGGTCAAGGGGA  200

seq1  AGCATGAAGAAACTCTGTGCAGGGGTGATAGCAGAAGTGAGGGAACTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGAAGAAACTCTGTGCAGGGGTGATAGCAGAAGTGAGGGAACTAGA  250

seq1  AGAATAGAGTGTTCCCAGGAAGAACCTGCTGGAGAAGATGTGGTCTAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGAGTGTTCCCAGGAAGAACCTGCTGGAGAAGATGTGGTCTAAAG  300

seq1  ATGAAGCTGTACAGATCATCTGTCTTAGAGATGAGAGGCCATGCTGAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGCTGTACAGATCATCTGTCTTAGAGATGAGAGGCCATGCTGAGTA  350

seq1  CCAAAGGAGCGGTCGAGACCCTGGTGAAATGATAACTCCCTAAAGATAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGGAGCGGTCGAGACCCTGGTGAAATGATAACTCCCTAAAGATAAC  400

seq1  TCATTCTTGACCCTTAACCTTTCATGAGGAACAGCTAATTACTGAGTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCTTGACCCTTAACCTTTCATGAGGAACAGCTAATTACTGAGTTTT  450

seq1  TATTTTGATTTGAGGAACCTATTGGTTCTCTGTGCACACTGGGTTCCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGATTTGAGGAACCTATTGGTTCTCTGTGCACACTGGGTTCCTTT  500

seq1  TTATTACAAATCTTGCTAATTAATGGTGTGAAATTGGTTATTTTTCCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTACAAATCTTGCTAATTAATGGTGTGAAATTGGTTATTTTTCCATT  550

seq1  AAATCAGGCATTTCTTCCCCCTTTTTATTAAGAATTATTTACTTAATTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGGCATTTCTTCCCCCTTTTTATTAAGAATTATTTACTTAATTTA  600

seq1  TGTATATGAGTAGCTGTCTTCAGGCGTGTCAGAAGAGGGCATCAGATCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATGAGTAGCTGTCTTCAGGCGTGTCAGAAGAGGGCATCAGATCAC  650

seq1  ATTACATATGTCTGTGAGCCACCATGTAGTTGTTGGGAATTGAACTCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATATGTCTGTGAGCCACCATGTAGTTGTTGGGAATTGAACTCAGA  700

seq1  ACATCTGGAAGAGCAGTCAGTGCCCTTAACCACTGAGCCATCTCTCCAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTGGAAGAGCAGTCAGTGCCCTTAACCACTGAGCCATCTCTCCAGT  750

seq1  TTCTGAAATTCTTCCTTTTACCGGCGTAAAGATCTATCAAAACTAAACCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAATTCTTCCTTTTACCGGCGTAAAGATCTATCAAAACTAAACCA  800

seq1  GCAAAAACTGAAAATTGTTTTTTTATTTTTTTAAAGGTTTAAATTTAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAACTGAAAATTGTTTTTTTATTTTTTTAAAGGTTTAAATTTAAAA  850

seq1  AAAAAAAGTGCT-GGAGGTAGCATAATAGCATGTGGCCTGTCACTGAGTA  899
      |||||||||||| ||||||||||| |||||||||||||||||||||||| 
seq2  AAAAAAAGTGCTGGGAGGTAGCAT-ATAGCATGTGGCCTGTCACTGAGT-  898

seq1  ATACC-TCCAGGCCAGACCACAGAAGTTGTTGTTGTTGTTGTTGTTGTTG  948
      ||||| ||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATACCTTCCAGGCCAGACCACAGAAGTTGTTGTTGTTGTTGTTGTTG-TG  947

seq1  TTGT  952
      ||||
seq2  TTGT  951