BAC Information

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BAC

Clone NameB6Ng01-216N14
Chromosome2 (Build37)
Map Location 139,975,587 - 139,976,484
singlet/doubletsinglet
Overlap geneEsf1
Upstream geneLOC628103, C130053K05Rik, LOC100043792, 5430433G21Rik, Tasp1, LOC672103, LOC269365
Downstream gene2310003L22Rik, Sel1l2, 2900006F19Rik, Flrt3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-216N14.bB6Ng01-216N14.g
ACCGA033431GA033432
length1,219898
definitionB6Ng01-216N14.b B6Ng01-216N14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacgcagttgaatccttctaaacagtctgttttacgggaacactt
cattaccattacccgcagttctggttccggaatgagggatcttccttgcg
ccggtgatggtaaccatcccgggttttctcatcccaggatttctcgtcct
gggttttctcgtctcgggtttcagcaccaactcttacacgcgttctcgcg
accggccaggaagaacgcaacaaaccggaatcttctgcgacaaaacttta
ttgcttacatcttcaggagccagagagcaagagagcaagagctctattgc
ttacatctttaggagccaaagcgcaagagagcaagagagagggcaagagc
gcaagagcgcaagagctttattgcttacatctttaggagccagaagcaag
agccagagcaagagctcaagagcgcaaaagagcaagagtgcaagagagag
aatggcgaaaccccgtcccctttaaggagaattattctccgcctaggacg
tattactccctgattggctgcagcccatcggccgagttgtcgtcacgggg
aaggcagagcacatggggtggaaaactacccttggcacatgcgcagatta
tttgtttaccacttagaacacaggatgtcagcgccatcttgcaacagcga
atgtgagggcggctccccacacccaatcacaaaagaagtcacttgatatg
cattcactatcagtggatattagcccagaaacttagaatacccaagatac
aatttgcaaaacacaagaaaatcaagaagaaggaagaccaacgtgtggat
acttcattcctccttagaatagggaacaaaatacccatggaaggagttac
agagacaaagtgtggagctaagacgaaaggatggaccatccagagactac
accacctgggaatccatccataatcagccaccaaacccagacacttattt
gcatatgccagcaagattttgctgaaaggacaactggatatagctgtctc
gtgtgaggcttatgccaggtgcatggcaaataacagagtggatgcctcca
cagtaattcttattgattggaacacagggttccgatgggaggagcttaga
gaaggtacctaaggagctgtgaaagctgcaatccctataggtgaacacat
ataacttatcagtaactcgagagatcgtgttctagacctgcattatgtgt
agcgcagaaggaagtgtgc
gaattctgtcatgtatcccataattcaatggataaaacatgaggaacaca
ttaacaaaatggcaatgtatttcattctattaaaagcttacttctgaaaa
cataattagaagcaagatgcttccacgttgaaactttagtggtaagtctc
tgatggcttactttaaattgattttttccagtactaaattgtactttctg
aagctctaaaatgtgggataactcatgtaggtctgcttttctaattcaag
gacattttatgaatgcttttatagtaaataagatttttttaaaaaataaa
ttcaaacaataagctattcttataaacaataatcaggaatgtttaatact
caaatatactattgtaactatcacaagcactaaattgcagatcaaggtaa
gtttgtgatctattaaaatactgaagaaaaaggcatgcttttgaaaaaat
tacatatttcaaactgagagaagcgaatctttagttttaagacaaagtac
ataatacaaagtactatcctaactacttatatacatcatttagtctttct
atgagccagttaatattataattcttacttcacagctatacaaagaaagg
accatggtgctaagaaaacttgacctttgttatttcaccatgtggtaaag
tcaagttttgaaactagtagagcttaagggtttttccttccctattttag
aatacgaaaggttaaacataggattttatgaaccttggcaaacactctac
cattgagctgtatccccagtgagtccaagatattaaatacactgaaaaat
taatgattattttatgataatgttaatgcttatttatcatactactaggt
gtcctattgtaaacactgttttaaaatttaaatggggatgggggtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_139975587_139976484
seq2: B6Ng01-216N14.g_65_962

seq1  GAATTCTGTCATGTATCCCATAATTCAATGGATAAAACATGAGGAACACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCATGTATCCCATAATTCAATGGATAAAACATGAGGAACACA  50

seq1  TTAACAAAATGGCAATGTATTTCATTCTATTAAAAGCTTACTTCTGAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAAAATGGCAATGTATTTCATTCTATTAAAAGCTTACTTCTGAAAA  100

seq1  CATAATTAGAAGCAAGATGCTTCCACGTTGAAACTTTAGTGGTAAGTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTAGAAGCAAGATGCTTCCACGTTGAAACTTTAGTGGTAAGTCTC  150

seq1  TGATGGCTTACTTTAAATTGATTTTTTCCAGTACTAAATTGTACTTTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGCTTACTTTAAATTGATTTTTTCCAGTACTAAATTGTACTTTCTG  200

seq1  AAGCTCTAAAATGTGGGATAACTCATGTAGGTCTGCTTTTCTAATTCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTAAAATGTGGGATAACTCATGTAGGTCTGCTTTTCTAATTCAAG  250

seq1  GACATTTTATGAATGCTTTTATAGTAAATAAGATTTTTTTAAAAAATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTTATGAATGCTTTTATAGTAAATAAGATTTTTTTAAAAAATAAA  300

seq1  TTCAAACAATAAGCTATTCTTATAAACAATAATCAGGAATGTTTAATACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACAATAAGCTATTCTTATAAACAATAATCAGGAATGTTTAATACT  350

seq1  CAAATATACTATTGTAACTATCACAAGCACTAAATTGCAGATCAAGGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATACTATTGTAACTATCACAAGCACTAAATTGCAGATCAAGGTAA  400

seq1  GTTTGTGATCTATTAAAATACTGAAGAAAAAGGCATGCTTTTGAAAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTGATCTATTAAAATACTGAAGAAAAAGGCATGCTTTTGAAAAAAT  450

seq1  TACATATTTCAAACTGAGAGAAGCGAATCTTTAGTTTTAAGACAAAGTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATTTCAAACTGAGAGAAGCGAATCTTTAGTTTTAAGACAAAGTAC  500

seq1  ATAATACAAAGTACTATCCTAACTACTTATATACATCATTTAGTCTTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATACAAAGTACTATCCTAACTACTTATATACATCATTTAGTCTTTCT  550

seq1  ATGAGCCAGTTAATATTATAATTCTTACTTCACAGCTATACAAAGAAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCCAGTTAATATTATAATTCTTACTTCACAGCTATACAAAGAAAGG  600

seq1  ACCATGGTGCTAAGAAAACTTGACCTTTGTTATTTCACCATGTGGTAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGGTGCTAAGAAAACTTGACCTTTGTTATTTCACCATGTGGTAAAG  650

seq1  TCAAGTTTTGAAACTAGTAGAGCTTAAGGGTTTTTCCTTCCCTATTTTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTTTTGAAACTAGTAGAGCTTAAGGGTTTTTCCTTCCCTATTTTAG  700

seq1  AATACGAAAGGTTAAACATAGGATTTTATGAACCTTGGCAAACACTCTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACGAAAGGTTAAACATAGGATTTTATGAACCTTGGCAAACACTCTAC  750

seq1  CATTGAGCTGTATCCCCAGTGAGTCCAAGATATTAAATACACTGAAAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAGCTGTATCCCCAGTGAGTCCAAGATATTAAATACACTGAAAAAT  800

seq1  TAATGATTATTTTATGATAATGTTAATGCTTATTTATCAATACTACTAGG  850
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TAATGATTATTTTATGATAATGTTAATGCTTATTTATC-ATACTACTAGG  849

seq1  TGTCCTATTGTAAACACTGTTTTAAAATTTAAATGGGGAT-GGGGTGGG  898
      |||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGTCCTATTGTAAACACTGTTTTAAAATTTAAATGGGGATGGGGGTGGG  898