BAC Information

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BAC

Clone NameB6Ng01-217L14
Chromosome2 (Build37)
Map Location 136,629,153 - 136,729,782
singlet/doubletdoublet
Overlap geneMkks, 2210009G21Rik
Upstream genePlcb4, 6330527O06Rik, Pak7, LOC668910, LOC100043492, BC034902, Ankrd5, Snap25, LOC668911
Downstream geneJag1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-217L14.bB6Ng01-217L14.g
ACCGA034048GA034049
length2321,087
definitionB6Ng01-217L14.b B6Ng01-217L14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(136,729,551 - 136,729,782)(136,629,153 - 136,630,247)
sequence
gaattctctctcttccttttctctctctcacctacctccttctgtgctct
gctttcctctcttccacacacacagaagcagtcacagttcataaacaacc
ttgaggaggctgctgctgtaattagaactttctttcacatttcacagcca
tctatttagtcatttcccttttaattttgactttttactgttgatttgtg
tgtgcagtgtgtgtgtgtgtgtgggggggggg

gaattcctccttaaaataaaaaaaggaaaaacatgtttgacatatacctc
tccgtgtgatcatctccataaccctttcttaatttcttcagtgttctctt
tatgggaagtatgacatgaaccaccaacagctaggagcaaaggttccatt
tggtctagctgatttattctcaattttcttatgaattgagaaaaattctc
taaaaaacagtttccatatacaaaataccgtctcacacatcagaggaaaa
tatactgaacagattcgtaagtagacagatagaaggggaacaccttacag
tcatatagtcagaaagcatgaattcatcaggatgctctgaaatgcttgta
tttccacgctagaaagacctggaattaattttctttcctacaaactactt
tggctctgagaacattctaagtataataataacagcaattagaggcacga
cttgaaatcagagtgacttgcctttgaagcattgagagtaagagggaaca
agaatactcctggagagcacgaacatgcctctctccaagtacaattacag
atttgagatctctcgttatcttaccatggcaactttcttacttaatttct
caagtgttgaacctttgtcattttgttcctttaggggagtctttcaactg
cttcccctggattcagctcacatcattgtctttggtacattcctcaaagc
acataccacaagctcacatccctagaccaagaattacagcaaaagcttag
aaaaattggccccaccctcagcgtcttacttagctatattatttatagtt
aatgaaaaccaagaatccaaagggtcagtgccaaatcaaaagcaacactt
aggtcctctgcactattcaattttaataatagttgctaaatatatagtct
gctgaaacttcaggcatacaaagactaaagaaacttctttcattctaatg
tgagaagttcacatggagaagagaataaaatccaagttactaaaagtagt
tttaactatgctccaccaagagcacagcattagcatcgctgggacttagc
atctgaaacagcagcagctctcaggaacgactctgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_136729551_136729782
seq2: B6Ng01-217L14.b_45_276 (reverse)

seq1  CCCCCCCCCCACACACACACACACACTGCACACACAAATCAACAGTAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCACACACACACACACACTGCACACACAAATCAACAGTAAAA  50

seq1  AGTCAAAATTAAAAGGGAAATGACTAAATAGATGGCTGTGAAATGTGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAAATTAAAAGGGAAATGACTAAATAGATGGCTGTGAAATGTGAAA  100

seq1  GAAAGTTCTAATTACAGCAGCAGCCTCCTCAAGGTTGTTTATGAACTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTTCTAATTACAGCAGCAGCCTCCTCAAGGTTGTTTATGAACTGTG  150

seq1  ACTGCTTCTGTGTGTGTGGAAGAGAGGAAAGCAGAGCACAGAAGGAGGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTTCTGTGTGTGTGGAAGAGAGGAAAGCAGAGCACAGAAGGAGGTA  200

seq1  GGTGAGAGAGAGAAAAGGAAGAGAGAGAATTC  232
      ||||||||||||||||||||||||||||||||
seq2  GGTGAGAGAGAGAAAAGGAAGAGAGAGAATTC  232


seq1: chr2_136629153_136630247
seq2: B6Ng01-217L14.g_69_1155

seq1  GAATTCCTCCTTAAAATAAAAAAAGGAAAAACATGTTTGACATATACCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCTTAAAATAAAAAAAGGAAAAACATGTTTGACATATACCTC  50

seq1  TCCGTGTGATCATCTCCATAACCCTTTCTTAATTTCTTCAGTGTTCTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTGTGATCATCTCCATAACCCTTTCTTAATTTCTTCAGTGTTCTCTT  100

seq1  TATGGGAAGTATGACATGAACCACCAACAGCTAGGAGCAAAGGTTCCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGAAGTATGACATGAACCACCAACAGCTAGGAGCAAAGGTTCCATT  150

seq1  TGGTCTAGCTGATTTATTCTCAATTTTCTTATGAATTGAGAAAAATTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTAGCTGATTTATTCTCAATTTTCTTATGAATTGAGAAAAATTCTC  200

seq1  TAAAAAACAGTTTCCATATACAAAATACCGTCTCACACATCAGAGGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAACAGTTTCCATATACAAAATACCGTCTCACACATCAGAGGAAAA  250

seq1  TATACTGAACAGATTCGTAAGTAGACAGATAGAAGGGGAACACCTTACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTGAACAGATTCGTAAGTAGACAGATAGAAGGGGAACACCTTACAG  300

seq1  TCATATAGTCAGAAAGCATGAATTCATCAGGATGCTCTGAAATGCTTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATAGTCAGAAAGCATGAATTCATCAGGATGCTCTGAAATGCTTGTA  350

seq1  TTTCCACGCTAGAAAGACCTGGAATTAATTTTCTTTCCTACAAACTACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCACGCTAGAAAGACCTGGAATTAATTTTCTTTCCTACAAACTACTT  400

seq1  TGGCTCTGAGAACATTCTAAGTATAATAATAACAGCAATTAGAGGCACGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCTGAGAACATTCTAAGTATAATAATAACAGCAATTAGAGGCACGA  450

seq1  CTTGAAATCAGAGTGACTTGCCTTTGAAGCATTGAGAGTAAGAGGGAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAATCAGAGTGACTTGCCTTTGAAGCATTGAGAGTAAGAGGGAACA  500

seq1  AGAATACTCCTGGAGAGCACGAACATGCCTCTCTCCAAGTACAATTACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATACTCCTGGAGAGCACGAACATGCCTCTCTCCAAGTACAATTACAG  550

seq1  ATTTGAGATCTCTCGTTATCTTACCATGGCAACTTTCTTACTTAATTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAGATCTCTCGTTATCTTACCATGGCAACTTTCTTACTTAATTTCT  600

seq1  CAAGTGTTGAACCTTTGTCATTTTGTTCCTTTAGGGGAGTCTTTCAACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGTTGAACCTTTGTCATTTTGTTCCTTTAGGGGAGTCTTTCAACTG  650

seq1  CTTCCCCTGGATTCAGCTCACATCATTGTCTTTGGTACATTCCTCAAAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCCTGGATTCAGCTCACATCATTGTCTTTGGTACATTCCTCAAAGC  700

seq1  ACATACCACAAGCTCACATCCCTAGACCAAGAATTACAGCAAAAGCTTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACCACAAGCTCACATCCCTAGACCAAGAATTACAGCAAAAGCTTAG  750

seq1  AAAAATTGGCCCCACCCTCAGCGTCTTACTTAGCTATATTATTTATAGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTGGCCCCACCCTCAGCGTCTTACTTAGCTATATTATTTATAGTT  800

seq1  AATGAAAACCAAGAATCCAAAGGGTCAGTGCCAAATCAAAAGCAACACTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAAACCAAGAATCCAAAGGGTCAGTGCCAAATCAAAAGCAACACTT  850

seq1  AGGTCCTCTGCACTATTCAATTTTAATAATAGTTGCTAAATATATAGTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCTCTGCACTATTCAATTTTAATAATAGTTGCTAAATATATAGTCT  900

seq1  GCTGAAACTTCAGGGCATACAAAGACTAAAGAAAACTTCTTTCATTCTAA  950
      |||||||||||| |||||||||||||||||| ||||||||||||||||||
seq2  GCTGAAACTTCA-GGCATACAAAGACTAAAG-AAACTTCTTTCATTCTAA  948

seq1  TGTGAGAAGTTCACAATGGAG-AGAGAATAAAATCCAAGTTACTAAAAAG  999
      |||||||||||||| |||||| |||||||||||||||||||||| |||||
seq2  TGTGAGAAGTTCAC-ATGGAGAAGAGAATAAAATCCAAGTTACT-AAAAG  996

seq1  TAGTTTTAACTATGCT-CACC-AGAGCAACAGCATTAGCATCGCCTGGGA  1047
      |||||||||||||||| |||| ||||| ||||||||||||||| ||||| 
seq2  TAGTTTTAACTATGCTCCACCAAGAGC-ACAGCATTAGCATCG-CTGGG-  1043

seq1  ACTTAGGCATCTGAAACAGCAGCAGCTCTCAGGAGCCAGAACTCTGTG  1095
      ||||| ||||||||||||||||||||||||||||   |  ||||||||
seq2  ACTTA-GCATCTGAAACAGCAGCAGCTCTCAGGA---ACGACTCTGTG  1087


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