BAC Information

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BAC

Clone NameB6Ng01-217O23
Chromosome2 (Build37)
Map Location 61,926,712 - 61,927,791
singlet/doubletsinglet
Overlap geneSlc4a10
Upstream geneTank, Psmd14, Tbr1, LOC100039274
Downstream geneDpp4, Gcg, Fap, Ifih1, Gca, Kcnh7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-217O23.bB6Ng01-217O23.g
ACCGA034197GA034198
length1,2161,091
definitionB6Ng01-217O23.b B6Ng01-217O23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcttttaaatattgagtagtgatataattttctgccttctcact
gtctttgacaagaaagtatagaagataattttatttaggatttatggatt
gactttaggtacagtaaagtaaaagctgacagtatacacagagaataact
tgttggcagtcactgttaggatgcattaacatctacagagctcccagggt
ctcgggggacacagatgaagatacagcagctctgtccctgaaactgtcat
agcttattagtgggacagcaaggctgaaacagatcaataatggactatat
ttttgatagtagtgtcctggaaacaacactttatcattagaataagttag
gtcaatgtatgactgaaactaaactccaacttctcaccatatacagatga
cagaatgaagtagattaaagacctaaatattttaggacctaaacccatga
aagttctagtagaaaccagagaagtgtttcaggacacaggaatgagtgaa
aggttagggagcgtggctctaaagcatagggaataacagcaaaatgagga
aaccacaaacctcaggaaacagtagagggaagaaacagccaacagaacag
gacaagtcatttgaaaatcatattcctgacaaggtattgataaccaaaat
atagaaagagctcaatccaggagcataggtgatgattaaaaataatcata
atccaatttagaagtagacaacagctctaaagtgtttttttccaccctgc
ttgaggaagatatacaaatgtcttccaaccagtgtttgaacaaaatgctc
tgcagagctgtcaggcacacacaaacctgactatagataatatgaatatc
atcaaaaaaataaaatctacaatgagaaatcacctgactatagataatat
atcatcaaaaatcataaaaaagatatatgaatatcatcaaaaagatcatg
tgtagaaaatgaaccctcatatgatgggagtgttaaattattaccattat
tatagaaaacaatgtgacttatcaccaaagacttaaaattcaataactac
catatgattccatcattaatggccaaaattttcaaagaaaatgaaattgg
tttggttaagagagcacaatctgttactcctcatggtttattggcattac
cttagtctatgggagccattgaaaaaaacatggatgggtgaatgggtctc
actggtggtgctatga
gaattcatatggaataaaagaatatttcaatatggattttaccatttggg
tccattggaacttcagttaagaactgaagatataggtaggatatgacttt
cccaaaaggtgaactattaagatatttgatgtaaagaaaaaggcatttac
ttatgttttcaagaacagctgcctttggcatgaggaagctttcatattaa
gccgagctacagcaattcacttgtgactgtgagacgctacatgcactagg
gagtttctaaaggccggctcctcagtgccatctgcccccgcatctccccc
gcctcaacccccgtgtgtgtagatcccggaacacagtctttcaaaagccg
ttctttagtaggaaaatagtttattgaaataaactgcttttaaaaatttt
tttacctcatgtgagcacaaaagttttcaggttttaaagattttaatgtt
aactcttttccaaaataataaaacaggaaaaggtatcatatattagtgat
actgaacaatgtgaattgagattacgaagctgagttagtcgaacattgct
aacaataaaatcatttttagaatatcaaaactaactcgtagatttctcgt
gacataaaaccctgtcacggaagacctaagaagctgcgcagtggtctctt
tgttcgagcgctggtttctttgcttgccgttccttttgtcacctggggca
ttttttcctccttttgtcacctggggcaatttttccaatacgtaacacat
attttttttctgcatttggaataatcagcttttccttgtgctcattaggg
gggaaaaccacaaccaaggtatttagcacaaagcaaggtattaacagtgc
ccagtcttctaccacataccaagttcctttgtctattacctaattaacat
acttttaatgagttcaccaagtttaatgaatacttcatataaactcagcg
tttttctacctcctcatttaatctgaacaccttgatgtaacagatctggc
cttgatatttatgaattaatttattgagcccagtaattttctgagataca
ataaggaattatgaaacattactatggaaggagttaagatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_61926712_61927791
seq2: B6Ng01-217O23.g_67_1157

seq1  GAATTCATATGGAATAAAAGAATATTTCAATATGGATTTTACCATTTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATGGAATAAAAGAATATTTCAATATGGATTTTACCATTTGGG  50

seq1  TCCATTGGAACTTCAGTTAAGAACTGAAGATATAGGTAGGATATGACTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTGGAACTTCAGTTAAGAACTGAAGATATAGGTAGGATATGACTTT  100

seq1  CCCAAAAGGTGAACTATTAAGATATTTGATGTAAAGAAAAAGGCATTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAAGGTGAACTATTAAGATATTTGATGTAAAGAAAAAGGCATTTAC  150

seq1  TTATGTTTTCAAGAACAGCTGCCTTTGGCATGAGGAAGCTTTCATATTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTTTTCAAGAACAGCTGCCTTTGGCATGAGGAAGCTTTCATATTAA  200

seq1  GCCGAGCTACAGCAATTCACTTGTGACTGTGAGACGCTACATGCACTAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGAGCTACAGCAATTCACTTGTGACTGTGAGACGCTACATGCACTAGG  250

seq1  GAGTTTCTAAAGGCCGGCTCCTCAGTGCCATCTGCCCCCGCATCTCCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTCTAAAGGCCGGCTCCTCAGTGCCATCTGCCCCCGCATCTCCCCC  300

seq1  GCCTCAACCCCCGTGTGTGTAGATCCCGGAACACAGTCTTTCAAAAGCCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAACCCCCGTGTGTGTAGATCCCGGAACACAGTCTTTCAAAAGCCG  350

seq1  TTCTTTAGTAGGAAAATAGTTTATTGAAATAAACTGCTTTTAAAAATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTAGTAGGAAAATAGTTTATTGAAATAAACTGCTTTTAAAAATTTT  400

seq1  TTTACCTCATGTGAGCACAAAAGTTTTCAGGTTTTAAAGATTTTAATGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTCATGTGAGCACAAAAGTTTTCAGGTTTTAAAGATTTTAATGTT  450

seq1  AACTCTTTTCCAAAATAATAAAACAGGAAAAGGTATCATATATTAGTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTTTCCAAAATAATAAAACAGGAAAAGGTATCATATATTAGTGAT  500

seq1  ACTGAACAATGTGAATTGAGATTACGAAGCTGAGTTAGTCGAACATTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAACAATGTGAATTGAGATTACGAAGCTGAGTTAGTCGAACATTGCT  550

seq1  AACAATAAAATCATTTTTAGAATATCAAAACTAACTCGTAGATTTCTCGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATAAAATCATTTTTAGAATATCAAAACTAACTCGTAGATTTCTCGT  600

seq1  GACATAAAACCCTGTCACGGAAGACCTAAGAAGCTGCGCAGTGGTCTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAAAACCCTGTCACGGAAGACCTAAGAAGCTGCGCAGTGGTCTCTT  650

seq1  TGTTCGAGCGCTGGTTTCTTTGCTTGCCGTTCCTTTTGTCACCTGGGGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCGAGCGCTGGTTTCTTTGCTTGCCGTTCCTTTTGTCACCTGGGGCA  700

seq1  TTTTTTCCTCCTTTTGTCACCTGGGGCAATTTTTCCAATACGTAACACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCCTCCTTTTGTCACCTGGGGCAATTTTTCCAATACGTAACACAT  750

seq1  A-TTTTTTTCTGCATTTGGAATAATCAGCTTTTCCTTGTGCTCATTAGGG  799
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTTCTGCATTTGGAATAATCAGCTTTTCCTTGTGCTCATTAGGG  800

seq1  GGGAAAACCACAACCAAGGTA-TTAGCACAAAGCAAGGTATTAACAGTGC  848
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GGGAAAACCACAACCAAGGTATTTAGCACAAAGCAAGGTATTAACAGTGC  850

seq1  CCAGTC-TCTACCACATACCAAGTTCCTTTGTCTATTACCTAATTAACAT  897
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCTTCTACCACATACCAAGTTCCTTTGTCTATTACCTAATTAACAT  900

seq1  AC-TTTAATGAGTTCACCAAGTTTAATGAATACTTCATATAAACTCAGCG  946
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTAATGAGTTCACCAAGTTTAATGAATACTTCATATAAACTCAGCG  950

seq1  -TTTTCTACCTCCTCATTTAATCTG-ACACC-TGATGTAACAGATCTGG-  992
       |||||||||||||||||||||||| ||||| ||||||||||||||||| 
seq2  TTTTTCTACCTCCTCATTTAATCTGAACACCTTGATGTAACAGATCTGGC  1000

seq1  CTTGATA-TTATGAA-TAATTTA-TGAG-CCAGTA--TTTCTGAGATAAC  1036
      ||||||| ||||||| ||||||| |||| ||||||  |||||||||||  
seq2  CTTGATATTTATGAATTAATTTATTGAGCCCAGTAATTTTCTGAGATA--  1048

seq1  AAATAAAGAA-TATGAAACATTTACTATGGAAGGAGTTAAAGATT  1080
       ||||| ||| ||||||||| ||||||||||||||||| ||||||
seq2  CAATAAGGAATTATGAAACA-TTACTATGGAAGGAGTT-AAGATT  1091