BAC Information

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BAC

Clone NameB6Ng01-218C03
Chromosome2 (Build37)
Map Location 143,467,197 - 143,467,750
singlet/doubletsinglet
Overlap genePcsk2
Upstream geneKif16b, Snrpb2, Otor, LOC668915, LOC668916
Downstream geneBfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1, 4930517K23Rik, LOC627160, EG433481, Snx5, 8430406I07Rik, Ovol2, Ppia-ps2_1789.1, LOC635097, Csrp2bp, LOC100043552, 6330439K17Rik, Polr3f, Rbbp9, Sec23b, Gm561, Dtd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218C03.bB6Ng01-218C03.g
ACCGA034343GA034344
length1,253548
definitionB6Ng01-218C03.b B6Ng01-218C03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccattttttaatggggttatttgatt
ttctggaatccaccttcttgaattctttatatatattggagattagtccc
ctatctgatttaggataggtaaagattcttttccaatctgttggtggcct
ttttgtcttattgacggtgtcttttgccttacagaagctttgcaatttta
tgaggtcccatttgtcgattctcgatcttagagcacaagccattgctgtt
ttattcagaaatttttcccctgtacccatatcttcgaggcttttccctac
tttctcctctataagtttcagtgtctctggttttatgtggagttccttaa
tccacttagatttgaccttagtacaagaagataggaatggatcaattcac
attcttctacatgataaccgccagttgtgccagcaccatttgttgaaaat
gctgtcttttttccactggatggtttttgctcccttgtcaaagatcaagt
gaccacgggtgtgtgggttcatttttgggtcttcaattctattccatcgg
tctaccctgggcatatatccagaagatgttccaacagggaagaaggacac
ttgctccactatattcatagcagccttatttataattgccagaagctgga
aagaacccagatgcccctcaacagaggagtggatacagaaaatgtggcac
atttacacattggagtactactcagctattgaaaagaatgaatttatgaa
attcctaggcaaatggatggacctggagagcatcatcctgagtgaggtaa
cccaatcacaaaagaactcacacaatatgtactcactgataagtggatat
tagcccagaaacttagaatacccaatatataagatacaatttgctaaaca
catgaaactcaagaagaacgaagaacaaagtgtcgacactttgccccttc
ttagaattgggaacaaaacacccatggaagagttacagagaacaaagttt
ggagctgagatgaaagatggaccatctagagactgccatatccggggata
catcccatatcagcttcaaatgctgacaccatgcatacactagcagattt
atcgaaagaaccagaaattaggtttcttttgagaacattgtcggacctag
caacacagaaatggatgttcacagtcagcaatgaatgatacaaggcctcg
aatgaagaccttgagaaggatccacaagagagcctataggaggatctctg
tca
aaatgtaacactgccatttgtgatcttttgcaagttttttggggggcacc
gcaggttaatagccgcagtacatcagtgccttccgggttcgggtgggttt
gggtgtgaggatctggcctgtttctctctggaaagagccacttagtcttc
agtggaaacaaagcacatcattagtcattactctctcggctgaaaaatgg
agtttccagagtttgccttgtgcaagcgagctattcatttgcagtcaggt
acacatgatttgtgtctcatttatctgtgcggaagtgctcagtaagtggg
cttgggcctggagttttcaatgggctggccaaacaaacatccaccctttt
atctttcctctgtgcgcatcaacattaatgtgaggctgccattagcagta
gttgactcgctgggataaaccttagaaattatggcccattgttgcctgat
tcgcccagcagtgacccagaaagcaacttgggggggggtgtctctcttct
ccccaggatgcaaatggactggggaggatattggtgaggaggagggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_143467197_143467750
seq2: B6Ng01-218C03.g_64_617 (reverse)

seq1  TTCCCTCCTCCTCACCAATATCCTCCCCAGTCCATTTGCATCCTGGGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCCTCCTCACCAATATCCTCCCCAGTCCATTTGCATCCTGGGGAG  50

seq1  AAGAGAGACACCCCCCCCCAAGTTGCTTTCTGGGTCACTGCTGGGCGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGACACCCCCCCCCAAGTTGCTTTCTGGGTCACTGCTGGGCGAAT  100

seq1  CAGGCAACAATGGGCCATAATTTCTAAGGTTTATCCCAGCGAGTCAACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAACAATGGGCCATAATTTCTAAGGTTTATCCCAGCGAGTCAACTA  150

seq1  CTGCTAATGGCAGCCTCACATTAATGTTGATGCGCACAGAGGAAAGATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTAATGGCAGCCTCACATTAATGTTGATGCGCACAGAGGAAAGATAA  200

seq1  AAGGGTGGATGTTTGTTTGGCCAGCCCATTGAAAACTCCAGGCCCAAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTGGATGTTTGTTTGGCCAGCCCATTGAAAACTCCAGGCCCAAGCC  250

seq1  CACTTACTGAGCACTTCCGCACAGATAAATGAGACACAAATCATGTGTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTACTGAGCACTTCCGCACAGATAAATGAGACACAAATCATGTGTAC  300

seq1  CTGACTGCAAATGAATAGCTCGCTTGCACAAGGCAAACTCTGGAAACTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTGCAAATGAATAGCTCGCTTGCACAAGGCAAACTCTGGAAACTCC  350

seq1  ATTTTTCAGCCGAGAGAGTAATGACTAATGATGTGCTTTGTTTCCACTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCAGCCGAGAGAGTAATGACTAATGATGTGCTTTGTTTCCACTGA  400

seq1  AGACTAAGTGGCTCTTTCCAGAGAGAAACAGGCCAGATCCTCACACCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTAAGTGGCTCTTTCCAGAGAGAAACAGGCCAGATCCTCACACCCAA  450

seq1  ACCCACCCGAACCCGGAAGGCACTGATGTACTGCGGCTATTAACCTGCGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACCCGAACCCGGAAGGCACTGATGTACTGCGGCTATTAACCTGCGG  500

seq1  TGCCCCCCAAAAAACTTGCAAAAGATCACAAATGGCAGTGTTACATTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCCCAAAAAACTTGCAAAAGATCACAAATGGCAGTGTTACATTTGA  550

seq1  ATTC  554
      ||||
seq2  ATTC  554