BAC Information

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BAC

Clone NameB6Ng01-218K03
Chromosome2 (Build37)
Map Location 96,786,173 - 96,931,561
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC100043267, Lrrc4c, LOC621146, LOC664974
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218K03.bB6Ng01-218K03.g
ACCGA034707GA034708
length1,011972
definitionB6Ng01-218K03.b B6Ng01-218K03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(96,930,552 - 96,931,561)(96,786,173 - 96,787,085)
sequence
gaattcaaatatatttaaaccatactacactttcctataagaaatcactc
ttcaatctcctactaagtaaatctaggaaccaaaaccaaatagatctgta
taagcagagatagaagtctgctatcttttaatcctaaaagtcacctggtg
aagtgggtattcttccatatttttagatgagaaaaatgagccttaaagaa
agtaatgtttagaaaaaaagacatgccactttatggtagaaggagataac
tctgtctcatagcacagtatctgaatttacagatggcaaccgagctcagc
aagaaacagtggttctcgatattctgcttgcgaatttgtttcctctatct
atttaactgggaccagtaacaaaggagaataaatcacacttgtgtcgtct
gtcagtgtcattgagaaagcagagagtataaagttgcaaagagccgccca
tacattctctctgtagccttatttccctaaatagttttatacaatctcct
agtctgatgatttatgtgtgactacattttttcttctacctcaatattat
gtgttaaatattctcatattcaagcaatgacatgcagatatttaaatatt
ttaaaaagaatgtgactatcatgattcagagtgaaagaaaatatatgaag
tggacatgagtgtgatgtagagaatctgagaagagtgagaaataatgtgt
gggaacatgatcaagacacattggattcatatatgaaatatacatttaga
gaaaggactgaaggagctgaaggggtttgcaaccacatagaaagtacaat
atcaaccaaccagacaacccaggggtcccaggaaccaaaacaccaaccaa
agagtacacatggaggaagctatgactccagccacatatgtagcagagga
tgtccttgttgggcatcaatggagagtcccttagtcctgtgaaagctcga
tgccccagtgtaagggggatatgagggcatggggacagggaggcaggagt
taattggtggg

gaattcaggaagagtttcctagtcaacattccacatgacttacttcaaaa
aaagcgcataacttatataagtcggtaatagaaatagtgtgtttattttg
agacatatcatattaaagaatgcagggcatacataagccaaagaccatgg
cataattttacataattcatataccatagagatatactttaaaaatatta
gaactaacaaagagaaattttaatatgttataaaatgtgtcttattgttt
tcagtggtatggatgcaatattcaaagactgccaattttttttttctgaa
aaacctctgacacagagctagagaataatttattgttgaaataattcttt
ttctgattttcagtagaatagcacatgagataatattgtagacacaaaag
aatactttcatgttagaaagtacaagcaagaaaattaagggtcatttgag
aagaagttagaaaacctagcacggtagaaacttactacacacacacacac
acacacacacacacacacacacacacacacaaagataatttaaaagtgat
agtcaaataagaggagagacagagccctgtatggacatcccttgtcacca
aatgaagcttccattcttggaaatgggctatatcttattgagtttttcac
caaaggggtcccatggaactgtactctaaacccaggctgttgcaaaaaat
acgaattttttttctacaaactgatagcaagacttcattgcagtagttaa
cacctatccaattctttggaaatggagaagctgagcttgtggctacatag
ggccttcatccctacattcttgtatctttaggggaagaaaggtattctgc
atgctgctaaaagagaaatgtagacaggagcatactcttaaatctttcaa
tctacaatggtgttcttactgcagatgtgttagtgcatgatgacacaaag
tttctgacataccatcattatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_96930552_96931561
seq2: B6Ng01-218K03.b_44_1054 (reverse)

seq1  CCCACCAATTAACTCCTGCCTCCCTGTCCCCATGCCCTCATATCCCCC-T  49
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CCCACCAATTAACTCCTGCCTCCCTGTCCCCATGCCCTCATATCCCCCTT  50

seq1  ACACTGGGGCATCGAGCTTTCACAGGACTAAGGGACTCTCCATTGATGCC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGGGGCATCGAGCTTTCACAGGACTAAGGGACTCTCCATTGATGCC  100

seq1  CAACAAGGACATCCTCTGCTACATATGTGGCTGGAGTCATAGCTTCCTCC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAGGACATCCTCTGCTACATATGTGGCTGGAGTCATAGCTTCCTCC  150

seq1  ATGTGTACTCTTTGGTTGGTGTTTTGGTTCCTGGGACCCCTGGGTTGTCT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTACTCTTTGGTTGGTGTTTTGGTTCCTGGGACCCCTGGGTTGTCT  200

seq1  GGTTGGTTGATATTGTACTTTCTATGTGGTTGCAAACCCCTTCAGCTCCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGTTGATATTGTACTTTCTATGTGGTTGCAAACCCCTTCAGCTCCT  250

seq1  TCAGTCCTTTCTCTAAATGTATATTTCATATATGAATCCAATGTGTCTTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCCTTTCTCTAAATGTATATTTCATATATGAATCCAATGTGTCTTG  300

seq1  ATCATGTTCCCACACATTATTTCTCACTCTTCTCAGATTCTCTACATCAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGTTCCCACACATTATTTCTCACTCTTCTCAGATTCTCTACATCAC  350

seq1  ACTCATGTCCACTTCATATATTTTCTTTCACTCTGAATCATGATAGTCAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATGTCCACTTCATATATTTTCTTTCACTCTGAATCATGATAGTCAC  400

seq1  ATTCTTTTTAAAATATTTAAATATCTGCATGTCATTGCTTGAATATGAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTTTAAAATATTTAAATATCTGCATGTCATTGCTTGAATATGAGA  450

seq1  ATATTTAACACATAATATTGAGGTAGAAGAAAAAATGTAGTCACACATAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTAACACATAATATTGAGGTAGAAGAAAAAATGTAGTCACACATAA  500

seq1  ATCATCAGACTAGGAGATTGTATAAAACTATTTAGGGAAATAAGGCTACA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCAGACTAGGAGATTGTATAAAACTATTTAGGGAAATAAGGCTACA  550

seq1  GAGAGAATGTATGGGCGGCTCTTTGCAACTTTATACTCTCTGCTTTCTCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAATGTATGGGCGGCTCTTTGCAACTTTATACTCTCTGCTTTCTCA  600

seq1  ATGACACTGACAGACGACACAAGTGTGATTTATTCTCCTTTGTTACTGGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACACTGACAGACGACACAAGTGTGATTTATTCTCCTTTGTTACTGGT  650

seq1  CCCAGTTAAATAGATAGAGGAAACAAATTCGCAAGCAGAATATCGAGAAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTTAAATAGATAGAGGAAACAAATTCGCAAGCAGAATATCGAGAAC  700

seq1  CACTGTTTCTTGCTGAGCTCGGTTGCCATCTGTAAATTCAGATACTGTGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTTTCTTGCTGAGCTCGGTTGCCATCTGTAAATTCAGATACTGTGC  750

seq1  TATGAGACAGAGTTATCTCCTTCTACCATAAAGTGGCATGTCTTTTTTTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGACAGAGTTATCTCCTTCTACCATAAAGTGGCATGTCTTTTTTTC  800

seq1  TAAACATTACTTTCTTTAAGGCTCATTTTTCTCATCTAAAAATATGGAAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATTACTTTCTTTAAGGCTCATTTTTCTCATCTAAAAATATGGAAG  850

seq1  AATACCCACTTCACCAGGTGACTTTTAGGATTAAAAGATAGCAGACTTCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCCACTTCACCAGGTGACTTTTAGGATTAAAAGATAGCAGACTTCT  900

seq1  ATCTCTGCTTATACAGATCTATTTGGTTTTGGTTCCTAGATTTACTTAGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGCTTATACAGATCTATTTGGTTTTGGTTCCTAGATTTACTTAGT  950

seq1  AGGAGATTGAAGAGTGATTTCTTATAGGAAAGTGTAGTATGGTTTAAATA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATTGAAGAGTGATTTCTTATAGGAAAGTGTAGTATGGTTTAAATA  1000

seq1  TATTTGAATTC  1010
      |||||||||||
seq2  TATTTGAATTC  1011


seq1: chr2_96786173_96787085
seq2: B6Ng01-218K03.g_64_977

seq1  GAATTCAGGAAGAGTTTCCTAGTCAACATTCCACATGACTTACTTCAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAAGAGTTTCCTAGTCAACATTCCACATGACTTACTTCAAAA  50

seq1  AAAGCGCATAACTTATATAAGTCGGTAATAGAAATAGTGTGTTTATTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCGCATAACTTATATAAGTCGGTAATAGAAATAGTGTGTTTATTTTG  100

seq1  AGACATATCATATTAAAGAATGCAGGGCATACATAAGCCAAAGACCATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATATCATATTAAAGAATGCAGGGCATACATAAGCCAAAGACCATGG  150

seq1  CATAATTTTACATAATTCATATACCATAGAGATATACTTTAAAAATATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTTTACATAATTCATATACCATAGAGATATACTTTAAAAATATTA  200

seq1  GAACTAACAAAGAGAAATTTTAATATGTTATAAAATGTGTCTTATTGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAACAAAGAGAAATTTTAATATGTTATAAAATGTGTCTTATTGTTT  250

seq1  TCAGTGGTATGGATGCAATATTCAAAGACTGCCAATTTTTTTTTTCTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGGTATGGATGCAATATTCAAAGACTGCCAATTTTTTTTTTCTGAA  300

seq1  AAACCTCTGACACAGAGCTAGAGAATAATTTATTGTTGAAATAATTCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTCTGACACAGAGCTAGAGAATAATTTATTGTTGAAATAATTCTTT  350

seq1  TTCTGATTTTCAGTAGAATAGCACATGAGATAATATTGTAGACACAAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATTTTCAGTAGAATAGCACATGAGATAATATTGTAGACACAAAAG  400

seq1  AATACTTTCATGTTAGAAAGTACAAGCAAGAAAATTAAGGGTCATTTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTTCATGTTAGAAAGTACAAGCAAGAAAATTAAGGGTCATTTGAG  450

seq1  AAGAAGTTAGAAAACCTAGCACGGTAGAAACTTACTACACACACACACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGTTAGAAAACCTAGCACGGTAGAAACTTACTACACACACACACAC  500

seq1  ACACACACACACACACACACACACACACACAAAGATAATTTAAAAGTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACAAAGATAATTTAAAAGTGAT  550

seq1  AGTCAAATAAGAGGAGAGACAGAGCCCTGTATGGACATCCCTTGTCACCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAATAAGAGGAGAGACAGAGCCCTGTATGGACATCCCTTGTCACCA  600

seq1  AATGAAGCTTCCATTCTTGGAAATGGGCTATATCTTATTGAGTTTTTCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGCTTCCATTCTTGGAAATGGGCTATATCTTATTGAGTTTTTCAC  650

seq1  CAAAGGGGTCCCATGGAACTGTACTCTAAACCCAGGCTGTTGCAAAAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGGGTCCCATGGAACTGTACTCTAAACCCAGGCTGTTGCAAAAAAT  700

seq1  ACGAATTTTTTTTCTACAAACTGATAGCAAGACTTCATTGCAGTAGTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAATTTTTTTTCTACAAACTGATAGCAAGACTTCATTGCAGTAGTTAA  750

seq1  CACCTATCCAATTCTTTGGAAATGGAGAAGCTGAGCTTGTGGCTACATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTATCCAATTCTTTGGAAATGGAGAAGCTGAGCTTGTGGCTACATAG  800

seq1  GGCCTTCATCCCTACATTCTTGTATCTTTAGGGGAAG-AAGGTATTCTGC  849
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GGCCTTCATCCCTACATTCTTGTATCTTTAGGGGAAGAAAGGTATTCTGC  850

seq1  ATGCTGCTAAAAGAGAAATGTAGACAGGAGCATACTCTTAAATCTTTCAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGCTAAAAGAGAAATGTAGACAGGAGCATACTCTTAAATCTTTCAA  900

seq1  TCTACAATGGTGTT  913
      ||||||||||||||
seq2  TCTACAATGGTGTT  914


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