BAC Information

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BAC

Clone NameB6Ng01-218N14
Chromosome2 (Build37)
Map Location 116,911,182 - 117,042,656
singlet/doubletdoublet
Overlap geneSpred1
Upstream geneLOC433464, Tmco5, LOC100043557, LOC241621
Downstream geneLOC624574, 2610510H03Rik, Rasgrp1, Thbs1, Fsip1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218N14.bB6Ng01-218N14.g
ACCGA034865GA034866
length1,101803
definitionB6Ng01-218N14.b B6Ng01-218N14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(117,041,558 - 117,042,656)(116,911,182 - 116,911,975)
sequence
gaattctgacatgtgccataaaatgaatggccttgaaaatataaggcaga
gtgagagaagctattcacaccaggataaatactgtgtggttgctttcata
taacatatctagtcacatcagtttcataaagacagaaagcagactgatag
ttgccaaggtatggggcagggagtcaggagttactgtgcaatgggtgtga
tttcataataaaaactgctctggagaaggtgggtggtgatgcttgtccag
agatatggatgtagttaatgaacactttaaaattagaaataattaaagta
catagaaaaatcaaggaagataagttgcattttactgtctactacaattt
taaagaagaaataaaaggaatgcatcaggctcaaatgggtgaaaagcagg
taggactaagttactttgaaaattagtatctaggctagagagacagctag
gctagagtaacagcagtggttgttctttcagaggacacagttcctaaggg
gttcctaacacccatgtggtggctcacaaccaaagtgactctagtttcag
gggattggacgccctcttctggcctttccaggcactgcatgaatgtggtg
cacagatatgcaggtaggtaaaaacactcatatacataaaatgaaatgga
ggaaaataattttaaaaagagaaaattagtgccttgcttgggggttttaa
ttcatttcaccttagatctgaaaaggttttgggtggataagaactctaag
ttgtccgtggaccttgctgcatcttcccttagctaccatgttactgcaga
attggtaaggccttcttgaaaaacatgtaagaggtcatcaattatcgggt
aagaaaaaaaatctcttgactcagagaattgagggtgcatttcactttat
ttatgtcgtgatgggatagtaaccaaccccttgaacccctgagcttgagt
ttcaacctttcatccaggaccctttgatgaggcaaaggtatgatagctct
tgccaaaatggggaagtcgttgcacatggtgttagaggcatcagtcattc
cagaaccagagtaataggaaagaagagccaccggttcaaggcagctgaag
t

gaattcagttgatcaagtccaaagcagtcatcttcacagagcccagagtg
gagaagggtaggaaataagtcatcggggacacacagagtacacagtgaag
ctgaccaaggataaacaatatgtactatcacccagaataaggaggaggtc
ttagaggatctgattttagaattgaacctgagtctttttgtggggaggag
ggggagtcaagccaagtacacactcattaagaaaagagcaagctaagaat
tcttttgtgttttcaggatcttgaaggtcccccccccttgcttctttatc
caaaacacatcatgtcttctggttctactcctcatgtgcatgcttgctgg
ggtggcttctctttccaccttcatttgtgtgggttattaagttatttttc
tagaactcttctttccatgtgagcttcaatgaacatactcaactatacct
agggaaaggtttcgttaaaatgttttaatacctatgtattgtgtttacat
acataaacataatccagagagaagaaaacacaacccggaaatactcagtt
ttatctttaccctgagtattgaatgctccagtgtgttttctgctatagtc
gtttgaagagtaatgagactttgatcgttttcatcttggaattgtattgc
aaagatgttgacttttggggatctagtcctcttgcctccaccccacccgg
atatggtctcatgaatttttgttgacattaacgaattagtttttgtgtgc
acagcacaggataagagaaacaatctgacgggttcagagtggttatttct
tcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_117041558_117042656
seq2: B6Ng01-218N14.b_45_1145 (reverse)

seq1  ACTTCAGCTGCCTTGAA-CGGTGGCTCTTCTTTCCCTATACTCT-GTTCT  48
      ||||||||||||||||| |||||||||||||||||   |||||| |||||
seq2  ACTTCAGCTGCCTTGAACCGGTGGCTCTTCTTTCCTATTACTCTGGTTCT  50

seq1  GGAATGACTGGATG-CTCTAACAACCATGTGC-ACGACTTCCCCATTTTG  96
      ||||||||| |||| ||||||| ||||||||| |||||||||||||||||
seq2  GGAATGACT-GATGCCTCTAAC-ACCATGTGCAACGACTTCCCCATTTTG  98

seq1  GCAAGAGCTATTCATACCTTTGCCTCATTCAAAGGGTCCTGGATG-AAGG  145
      |||||||||| |||||||||||||||| ||||||||||||||||| ||||
seq2  GCAAGAGCTA-TCATACCTTTGCCTCA-TCAAAGGGTCCTGGATGAAAGG  146

seq1  TTGAAACTCAAGCTCAGGGGTTCAAGGGGTTGGTTACTAT-CCATCACGA  194
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTGAAACTCAAGCTCAGGGGTTCAAGGGGTTGGTTACTATCCCATCACGA  196

seq1  CATAAATAAAGTGAAATGCACCCTCAATTCTCTGAGTCAAGAGATTTTTT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATAAAGTGAAATGCACCCTCAATTCTCTGAGTCAAGAGATTTTTT  246

seq1  TTCTTACCCGATAATTGATGACCTCTTACATGTTTTTCAAGAAGGCCTTA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTACCCGATAATTGATGACCTCTTACATGTTTTTCAAGAAGGCCTTA  296

seq1  CCAATTCTGCAGTAACATGGTAGCTAAGGGAAGATGCAGCAAGGTCCACG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTCTGCAGTAACATGGTAGCTAAGGGAAGATGCAGCAAGGTCCACG  346

seq1  GACAACTTAGAGTTCTTATCCACCCAAAACCTTTTCAGATCTAAGGTGAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACTTAGAGTTCTTATCCACCCAAAACCTTTTCAGATCTAAGGTGAA  396

seq1  ATGAATTAAAACCCCCAAGCAAGGCACTAATTTTCTCTTTTTAAAATTAT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTAAAACCCCCAAGCAAGGCACTAATTTTCTCTTTTTAAAATTAT  446

seq1  TTTCCTCCATTTCATTTTATGTATATGAGTGTTTTTACCTACCTGCATAT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCCATTTCATTTTATGTATATGAGTGTTTTTACCTACCTGCATAT  496

seq1  CTGTGCACCACATTCATGCAGTGCCTGGAAAGGCCAGAAGAGGGCGTCCA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCACCACATTCATGCAGTGCCTGGAAAGGCCAGAAGAGGGCGTCCA  546

seq1  ATCCCCTGAAACTAGAGTCACTTTGGTTGTGAGCCACCACATGGGTGTTA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCTGAAACTAGAGTCACTTTGGTTGTGAGCCACCACATGGGTGTTA  596

seq1  GGAACCCCTTAGGAACTGTGTCCTCTGAAAGAACAACCACTGCTGTTACT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCCCTTAGGAACTGTGTCCTCTGAAAGAACAACCACTGCTGTTACT  646

seq1  CTAGCCTAGCTGTCTCTCTAGCCTAGATACTAATTTTCAAAGTAACTTAG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCCTAGCTGTCTCTCTAGCCTAGATACTAATTTTCAAAGTAACTTAG  696

seq1  TCCTACCTGCTTTTCACCCATTTGAGCCTGATGCATTCCTTTTATTTCTT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACCTGCTTTTCACCCATTTGAGCCTGATGCATTCCTTTTATTTCTT  746

seq1  CTTTAAAATTGTAGTAGACAGTAAAATGCAACTTATCTTCCTTGATTTTT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAAATTGTAGTAGACAGTAAAATGCAACTTATCTTCCTTGATTTTT  796

seq1  CTATGTACTTTAATTATTTCTAATTTTAAAGTGTTCATTAACTACATCCA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTACTTTAATTATTTCTAATTTTAAAGTGTTCATTAACTACATCCA  846

seq1  TATCTCTGGACAAGCATCACCACCCACCTTCTCCAGAGCAGTTTTTATTA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTGGACAAGCATCACCACCCACCTTCTCCAGAGCAGTTTTTATTA  896

seq1  TGAAATCACACCCATTGCACAGTAACTCCTGACTCCCTGCCCCATACCTT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATCACACCCATTGCACAGTAACTCCTGACTCCCTGCCCCATACCTT  946

seq1  GGCAACTATCAGTCTGCTTTCTGTCTTTATGAAACTGATGTGACTAGATA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAACTATCAGTCTGCTTTCTGTCTTTATGAAACTGATGTGACTAGATA  996

seq1  TGTTATATGAAAGCAACCACACAGTATTTATCCTGGTGTGAATAGCTTCT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATATGAAAGCAACCACACAGTATTTATCCTGGTGTGAATAGCTTCT  1046

seq1  CTCACTCTGCCTTATATTTTCAAGGCCATTCATTTTATGGCACATGTCAG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTCTGCCTTATATTTTCAAGGCCATTCATTTTATGGCACATGTCAG  1096

seq1  AATTC  1099
      |||||
seq2  AATTC  1101


seq1: chr2_116911182_116911975
seq2: B6Ng01-218N14.g_64_866

seq1  GAATTCAGTTGATCAAGTCCAAAGCAGTCATCTTCACAGAGCCCAGAGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTGATCAAGTCCAAAGCAGTCATCTTCACAGAGCCCAGAGTG  50

seq1  GAGAAGGGTAGGAAATAAGTCATCGGGGACACACAGAGTACACAGTGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGGGTAGGAAATAAGTCATCGGGGACACACAGAGTACACAGTGAAG  100

seq1  CTGACCAAGGATAAACAATATGTACTATCACCCAGAATAAGGAGGAGGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCAAGGATAAACAATATGTACTATCACCCAGAATAAGGAGGAGGTC  150

seq1  TTAGAGGATCTGATTTTAGAATTGAACCTGAGTCTTTTTGTGGGGAGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGGATCTGATTTTAGAATTGAACCTGAGTCTTTTTGTGGGGAGGAG  200

seq1  GGGGAGTCAAGCCAAGTACACACTCATTAAGAAAAGAGCAAGCTAAGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGTCAAGCCAAGTACACACTCATTAAGAAAAGAGCAAGCTAAGAAT  250

seq1  TCTTTTGTGTTTTCAGGATCTTGAAGGTCCCCCCCCCTTGCTTCTTTATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGTGTTTTCAGGATCTTGAAGGTCCCCCCCCCTTGCTTCTTTATC  300

seq1  CAAAACACATCATGTCTTCTGGTTCTACTCCTCATGTGCATGCTTGCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACACATCATGTCTTCTGGTTCTACTCCTCATGTGCATGCTTGCTGG  350

seq1  GGTGGCTTCTCTTTCCACCTTCATTTGTGTGGGTTATTAAGTTATTTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCTTCTCTTTCCACCTTCATTTGTGTGGGTTATTAAGTTATTTTTC  400

seq1  TAGAACTCTTCTTTCCATGTGAGCTTCAATGAACATACTCAACTATACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACTCTTCTTTCCATGTGAGCTTCAATGAACATACTCAACTATACCT  450

seq1  AGGGAAAGGTTTCGTTAAAATGTTTTAATACCTATGTATTGTGTTTACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAAGGTTTCGTTAAAATGTTTTAATACCTATGTATTGTGTTTACAT  500

seq1  ACATAAACATAATCCAGAGAGAAGAAAACACAACCCGGAAATACTCAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAACATAATCCAGAGAGAAGAAAACACAACCCGGAAATACTCAGTT  550

seq1  TTATCTTTACCCTGAGTATTGAATGCTCCAGTGTGTTTTCTGCTATAGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTTACCCTGAGTATTGAATGCTCCAGTGTGTTTTCTGCTATAGTC  600

seq1  G-TTGAAGAGTAATGAGACTTTGATCGTTTTCATCTTGGAA-TGTATTGC  648
      | ||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GTTTGAAGAGTAATGAGACTTTGATCGTTTTCATCTTGGAATTGTATTGC  650

seq1  AAAGATGTTGACTTT--GGGATCTAGTCCTCTTGCCTCCACCCCA-CCGG  695
      |||||||||||||||  |||||||||||||||||||||||||||| ||||
seq2  AAAGATGTTGACTTTTGGGGATCTAGTCCTCTTGCCTCCACCCCACCCGG  700

seq1  ATATGGTCTCATG-AGTTTTGTTGACATTAACGAA-TAG-TTTTGTGTGC  742
      ||||||||||||| | ||||||||||||||||||| ||| ||||||||||
seq2  ATATGGTCTCATGAATTTTTGTTGACATTAACGAATTAGTTTTTGTGTGC  750

seq1  ACAGCACAAGGATAAGAGAGACAA-CTGA-GGGGTCAGAGTGGTTATTTC  790
      ||||||| ||||||||||| |||| |||| ||| ||||||||||||||||
seq2  ACAGCAC-AGGATAAGAGAAACAATCTGACGGGTTCAGAGTGGTTATTTC  799

seq1  TTCC  794
      ||||
seq2  TTCC  803


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