BAC Information

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BAC

Clone NameB6Ng01-218P02
Chromosome2 (Build37)
Map Location 99,045,202 - 99,168,276
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042886
Downstream geneLOC621386, LOC668702
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218P02.bB6Ng01-218P02.g
ACCGA034933GA034934
length760731
definitionB6Ng01-218P02.b B6Ng01-218P02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,045,202 - 99,045,953)(99,167,698 - 99,168,276)
sequence
gtaattcatttgaatcaatattgttagttttgttcttttactttgtttct
gtttcaaatttttccaatgatgttctaaaagacacatatattctttggtc
cagtttgatttatttggtcacccatgttttctacattttgatgatttttt
taaatattcattcaaatatttaatatttactgatcattattctaataaat
tgttatcatcaataatttagtcatgtaataaactgtatattcttgcattt
gcttcttacattgtcaggtttgttcccatactctgtctccaaattatgac
tattctctctgtgtgaaatagggtaggtgttatgacattattacctgcat
ttattttaaaagaggtaagtatcaattactgataatatgaattgaacata
tttcatgctattaaaagtattgtatgggcaattattgtttggttatgaaa
ttattattttttctcttggaaggcacaagttgtcatcaagtggttcagca
tgtctactattacactataaataggattatcattatccttattttctatc
cacttctaatttgttgatagttcctgttaaggactaaaataaaataaaga
gtaaataagctctgtaaataagaatacatccactgcctgcaggcatctat
taacttctacatgatcaagactatttaaagagactgctctttcctttaga
aaaaaatttatttaataaaaaaatataatgtgtactgtgctccccttctc
taagctttca
gaattcaatctctattgaccatctggtcatttggtctctccttaagatta
gtttgtttctccagtaagacacccttgaaagaaacaactttttttcattt
ggaaattgttattaactagagattgcttttgttttagtgtatgtccattt
ctctgttcatctttgggttccgtttggtatagaccagtgcaggctaagca
catgctggctgccagagtctctgagaaatcatatttgtatttgtcctgct
cattcagtaggctttacttttttggtgtcccccatctcttcttgctctta
ccctctttctactgtttctcccccgccccccatggtttttcttgaggcat
gaatggagggttttgatggagacatttggtttaagcctaagtgttccaag
gtctctcactttccttgcattgtgtggctgtaggtttctgtgtttttccc
atctgctgcaagaggatgcatctgtgaggatggctgaggaagccattggt
ctatgggcatagcagagtgacattaggagtcagttcattgatacattatt
ttagttaaactccagtatttggttttccccttgctcattggtctatctat
gatagactaactttcaaaaagagagaaagttagagtttctagaataacaa
aagaggtgccaagatcactacaaaatgtgtagattcagtatgtctgtgta
gaagcaagtaatggagttcttctgtatctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_99045202_99045953
seq2: B6Ng01-218P02.b_51_808

seq1  AATTCA-TTGAATCAATATTGTTAGTTTTGTTC-TTTACTTTG-TTCTGT  47
      |||||| |||||||||||||||||||||||||| ||||||||| ||||||
seq2  AATTCATTTGAATCAATATTGTTAGTTTTGTTCTTTTACTTTGTTTCTGT  50

seq1  TTCAAATTTTTCCAATGATGTTCTAAAAGACACATATATTCTTTGGTCCA  97
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATTTTTCCAATGATGTTCTAAAAGACACATATATTCTTTGGTCCA  100

seq1  GTTTGATTTATTTGGTCACCCATGTTTTCTACATTTTGATGATTTTTTTA  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGATTTATTTGGTCACCCATGTTTTCTACATTTTGATGATTTTTTTA  150

seq1  AATATTCATTCAAATATTTAATATTTACTGATCATTATTCTAATAAATTG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCATTCAAATATTTAATATTTACTGATCATTATTCTAATAAATTG  200

seq1  TTATCATCAATAATTTAGTCATGTAATAAACTGTATATTCTTGCATTTGC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCATCAATAATTTAGTCATGTAATAAACTGTATATTCTTGCATTTGC  250

seq1  TTCTTACATTGTCAGGTTTGTTCCCATACTCTGTCTCCAAATTATGACTA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTACATTGTCAGGTTTGTTCCCATACTCTGTCTCCAAATTATGACTA  300

seq1  TTCTCTCTGTGTGAAATAGGGTAGGTGTTATGACATTATTACCTGCATTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTGTGTGAAATAGGGTAGGTGTTATGACATTATTACCTGCATTT  350

seq1  ATTTTAAAAGAGGTAAGTATCAATTACTGATAATATGAATTGAACATATT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAAGAGGTAAGTATCAATTACTGATAATATGAATTGAACATATT  400

seq1  TCATGCTATTAAAAGTATTGTATGGGCAATTATTGTTTGGTTATGAAATT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCTATTAAAAGTATTGTATGGGCAATTATTGTTTGGTTATGAAATT  450

seq1  ATTATTTTTTCTCTTGGAAGGCACAAGTTGTCATCAAGTGGTTCAGCATG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTTTCTCTTGGAAGGCACAAGTTGTCATCAAGTGGTTCAGCATG  500

seq1  TCTACTATTACACTATAAATAGGATTATCATTATCCTTATTTTCTAGCCA  547
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TCTACTATTACACTATAAATAGGATTATCATTATCCTTATTTTCTATCCA  550

seq1  CTTCTAATTTGTTGATAGTTCCTGTTAAGGACTAAAATAAAATAAAGAGT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAATTTGTTGATAGTTCCTGTTAAGGACTAAAATAAAATAAAGAGT  600

seq1  AAATAAGCTCTGTAAATAAGAATACATCCACTGCCTGCAGGCATCTATTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGCTCTGTAAATAAGAATACATCCACTGCCTGCAGGCATCTATTA  650

seq1  ACTTCTACATGATCAAGACTATCTAAAGAGACTGCTC-TTCCTTAAGAAA  696
      |||||||||||||||||||||| |||||||||||||| |||||| |||||
seq2  ACTTCTACATGATCAAGACTATTTAAAGAGACTGCTCTTTCCTTTAGAAA  700

seq1  AAAAATAAATAAAT-AAAAAATATAATGTGTACTGTGCTCCCCTTCTC-C  744
      |||| | | | ||| |||||||||||||||||||||||||||||||||  
seq2  AAAATTTATTTAATAAAAAAATATAATGTGTACTGTGCTCCCCTTCTCTA  750

seq1  AGCTTTCA  752
      ||||||||
seq2  AGCTTTCA  758

seq1: chr2_99167698_99168276
seq2: B6Ng01-218P02.g_224_804 (reverse)

seq1  TGAGATACAG-AGAACTCCATT-CTTGCTTCTACACAGACATACTGAATC  48
      |||||||||| ||||||||||| |||||||||||||||||||||||||||
seq2  TGAGATACAGAAGAACTCCATTACTTGCTTCTACACAGACATACTGAATC  50

seq1  TACACATTTTGTAGTGATCTTGGCACCTCTTTTGTTATTCTAGAAACTCT  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATTTTGTAGTGATCTTGGCACCTCTTTTGTTATTCTAGAAACTCT  100

seq1  AACTTTCTCTCTTTTTGAAAGTTAGTCTCTCATAGATAGACCAATGAGCA  148
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AACTTTCTCTCTTTTTGAAAGTTAGTCTATCATAGATAGACCAATGAGCA  150

seq1  AGGGGAAAACCAAATACTGGAGTTTAACTAAAATAATGTATCAATGAACT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAAAACCAAATACTGGAGTTTAACTAAAATAATGTATCAATGAACT  200

seq1  GACTCCTAATGTCACTCTGCTATGCCCATAGACCAATGGCTTCCTCAGCC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCTAATGTCACTCTGCTATGCCCATAGACCAATGGCTTCCTCAGCC  250

seq1  ATCCTCACAGATGCATCCTCTTGCAGCAGATGGGAAAAACACAGAAACCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCACAGATGCATCCTCTTGCAGCAGATGGGAAAAACACAGAAACCT  300

seq1  ACAGCCACACAATGCAAGGAAAGTGAGAGACCTTGGAACACTTAGGCTTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCACACAATGCAAGGAAAGTGAGAGACCTTGGAACACTTAGGCTTA  350

seq1  AACCAAATGTCTCCATCAAAACCCTCCATTCATGCCTCAAGAAAAACCAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAATGTCTCCATCAAAACCCTCCATTCATGCCTCAAGAAAAACCAT  400

seq1  GGGGGGCGGGGGAGAAACAGTAGAAAGAGGGTAAGAGCAAGAAGAGATGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGCGGGGGAGAAACAGTAGAAAGAGGGTAAGAGCAAGAAGAGATGG  450

seq1  GGGACACCAAAAAAGTAAAGCCTACTGAATGAGCAGGACAAATACAAATA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACACCAAAAAAGTAAAGCCTACTGAATGAGCAGGACAAATACAAATA  500

seq1  TGATTTCTCAGAGACTCTGGCAGCCAGCATGTGCTTAGCCTGCACTGGTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCTCAGAGACTCTGGCAGCCAGCATGTGCTTAGCCTGCACTGGTC  550

seq1  TATACCAAACGGAACCCAAAGATGAACAGAG  579
      |||||||||||||||||||||||||||||||
seq2  TATACCAAACGGAACCCAAAGATGAACAGAG  581