BAC Information

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BAC

Clone NameB6Ng01-218P19
Chromosome2 (Build37)
Map Location 47,553,409 - 47,554,547
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC383691, LOC100041457
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218P19.bB6Ng01-218P19.g
ACCGA034959GA034960
length9961,133
definitionB6Ng01-218P19.b B6Ng01-218P19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaaatagactagaccaggaaaaaaattcctctggacaaaataat
cagaacaacaaatgcactaaataaagatagaatattaaaagcagtaaggg
aaaaaggttaagtaacatataaaggcagatctattagaattacaccagac
ttctcatcagagactatgaaagacagaaaatcctggacagatgttataca
gaccctaagagaacacaaatgccagcccaggctactatacccagaaaaac
tctcaattatcataaatggagaaagcaaagtattccataacaaaaccaaa
ttcacacaatatctttccacaatttcagcacttcagaggataataatggg
aaaacaccaacacaaagatggaaactactccctagaaaaaggaagaaagt
aatccttgaacaataaagaagacagccacaagaacagaatcccaactcta
ataacaaaaataacaggaatcaacaattacttttccttaatatcttttaa
tattaatgactcaattcccaagtaaaaagacatagaccaaaagagtggct
acataaacaggacccaatgttttgctgcttagaggaaaccaaactcagga
aaaaaagacagacaccacctcacagtaaaaggctgaaaaacaattttcca
agcaaatcgtccaaagaaacaagctggagtagccattctaatatcaaata
aaattgacttccagcccaaagttatcaaaaaagacaaggagggacacttt
atactcatgaaaggtaaaatcttccaagatgaactctcaattttgaatat
ctatgctctaaatgcaagggaatccacattcattaaagaaactatagtaa
tgctcaaagcacacgttgtacctcaaacaataatagtgggagacttcaac
accccactctcatcaatggaccaatgcaacaaaactaaacagagacacgt
tgaaactaacagaagttatgaaagaaatggatttaacagatatcta

gaattcagaaatccacctgcctctgcctcccgagtgctgggattaaaggt
gtgcaccaccacgcctggctgacatctgatttcttaaagtttcatgcaac
agagcattagtacttgcataagaaagatgttaagttttggaattcagaga
ttttaaatgcatctgtggcttacatcttcagagatatgaagttgaacttt
tacttctgaggttataagtggatagtaaaggaaattctactttgaaaatt
cttatagtgtctgaattttgcataaaagttacattatttagataaagcat
gaaaagaatatataaaaattacggagagtataaatattgtagttgtttta
ttttttcctttcttcttttcttttctttttgataaagaatcagttatctc
actcagaaatttttcagtatcttcatgtattttgtctcaatttgttatct
atactttctacgtaatgactgaatctaaatggcatttaacatcatatata
tttatgtagctctgcttataaatccatgggaaacaataacaatgttcaaa
ttataagcagaaagtagcttatggctgaacacttcaataaatatattcct
ttaacttactgaatcaagtgtattacttataacagtgtatattattgtaa
aatatcaattgggattgaggttaccataaaaatataactgaaaccatttt
tacaattattcggacaataaattttcttgagattagaaaatgctaaattt
aaatacataggcaattcatctttaagctaacaattaagattgaataaatt
tattctgttaatggaaaagtgattgaaatcaatacacacacacaaaaaaa
taaaccatattattgagttaaacagtacaaagaagattctttaaaatgtt
gacattctttacaatgtaggtcatttatcctaattccatctctggtggtc
tgtcactgccctatctagatttcttcccagatagtaaattacttttaaga
actatgttgattatctcagactgagaaaaactcagttatagtgagcataa
aatagtattatcaaatacccacatgaaactctctttatgaaggtgaggtt
atgtccaccacggggaaatggacctggaagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_47553409_47554547
seq2: B6Ng01-218P19.g_64_1196

seq1  GAATTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGT  50

seq1  GTGCACCACCACGCCTGGCTGACATCTGATTTCTTAAAGTTTCATGCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACCACCACGCCTGGCTGACATCTGATTTCTTAAAGTTTCATGCAAC  100

seq1  AGAGCATTAGTACTTGCATAAGAAAGATGTTAAGTTTTGGAATTCAGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCATTAGTACTTGCATAAGAAAGATGTTAAGTTTTGGAATTCAGAGA  150

seq1  TTTTAAATGCATCTGTGGCTTACATCTTCAGAGATATGAAGTTGAACTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAATGCATCTGTGGCTTACATCTTCAGAGATATGAAGTTGAACTTT  200

seq1  TACTTCTGAGGTTATAAGTGGATAGTAAAGGAAATTCTACTTTGAAAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCTGAGGTTATAAGTGGATAGTAAAGGAAATTCTACTTTGAAAATT  250

seq1  CTTATAGTGTCTGAATTTTGCATAAAAGTTACATTATTTAGATAAAGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAGTGTCTGAATTTTGCATAAAAGTTACATTATTTAGATAAAGCAT  300

seq1  GAAAAGAATATATAAAAATTACGGAGAGTATAAATATTGTAGTTGTTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAATATATAAAAATTACGGAGAGTATAAATATTGTAGTTGTTTTA  350

seq1  TTTTTTCCTTTCTTCTTTTCTTTTCTTTTTGATAAAGAATCAGTTATCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCCTTTCTTCTTTTCTTTTCTTTTTGATAAAGAATCAGTTATCTC  400

seq1  ACTCAGAAATTTTTCAGTATCTTCATGTATTTTGTCTCAATTTGTTATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGAAATTTTTCAGTATCTTCATGTATTTTGTCTCAATTTGTTATCT  450

seq1  ATACTTTCTACGTAATGACTGAATCTAAATGGCATTTAACATCATATATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTTCTACGTAATGACTGAATCTAAATGGCATTTAACATCATATATA  500

seq1  TTTATGTAGCTCTGCTTATAAATCCATGGGAAACAATAACAATGTTCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTAGCTCTGCTTATAAATCCATGGGAAACAATAACAATGTTCAAA  550

seq1  TTATAAGCAGAAAGTAGCTTATGGCTGAACACTTCAATAAATATATTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAGCAGAAAGTAGCTTATGGCTGAACACTTCAATAAATATATTCCT  600

seq1  TTAACTTACTGAATCAAGTGTATTACTTATAACAGTGTATATTATTGTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTTACTGAATCAAGTGTATTACTTATAACAGTGTATATTATTGTAA  650

seq1  AATATCAATTGGGATTGAGGTTACCATAAAAATATAACTGAAACCATTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCAATTGGGATTGAGGTTACCATAAAAATATAACTGAAACCATTTT  700

seq1  TACAATTATTCGGACAATAAATTTTCTTGAGATTAGAAAATGCTAAATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATTATTCGGACAATAAATTTTCTTGAGATTAGAAAATGCTAAATTT  750

seq1  AAATACATAGGCAATTCATCTTTAAGCTAACAATTAAGATTGAATAAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACATAGGCAATTCATCTTTAAGCTAACAATTAAGATTGAATAAATT  800

seq1  TATTCTGTTAATGGAAAAGTGATTGAAATCAATACACACACACAAAAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGTTAATGGAAAAGTGATTGAAATCAATACACACACACAAAAAAA  850

seq1  TAAACCATATTATTGAGTTAAACAGTACAAAGAAGATTCTTTAAAATGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCATATTATTGAGTTAAACAGTACAAAGAAGATTCTTTAAAATGTT  900

seq1  GACATTCTTTACAATGTAGGTCATTTATCCTAATTCCATCTCTGGTGGTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTCTTTACAATGTAGGTCATTTATCCTAATTCCATCTCTGGTGGTC  950

seq1  TGTCACTGCCCTATCTAGATTTCTTTCCCAAGATAGTAAATTACTTTTAA  1000
      |||||||||||||||||||||||||  || ||||||||||||||||||||
seq2  TGTCACTGCCCTATCTAGATTTCTT--CCCAGATAGTAAATTACTTTTAA  998

seq1  GAACTATGTTGATTATCTCAGACTGAGAAAAACTCAGTTATAGTTGAGCA  1050
      ||||||||||||||||||||||||||||||||||||||||||| ||||| 
seq2  GAACTATGTTGATTATCTCAGACTGAGAAAAACTCAGTTATAG-TGAGC-  1046

seq1  ATAAATAAGTATTATCAAATAACCACATGAAAACTCTCTTTATAGAAGTT  1100
      |||||  |||||||||||||| ||||||| ||||||||||||| |||| |
seq2  ATAAAATAGTATTATCAAATACCCACATG-AAACTCTCTTTAT-GAAGGT  1094

seq1  GA-GTTATGTCCACCAGCGGGGAGATGGAACCTGAAGAGA  1139
      || ||||||||||||| |||||| ||||| |  |||||||
seq2  GAGGTTATGTCCACCA-CGGGGAAATGGACCTGGAAGAGA  1133


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