BAC Information

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BAC

Clone NameB6Ng01-219K15
Chromosome2 (Build37)
Map Location 167,472,130 - 167,680,631
singlet/doubletdoublet
Overlap geneAI840826, Cebpb
Upstream geneBC067047, Trp53rk, Arfgef2, LOC670802, Cse1l, Stau1, LOC383774, Ddx27, AI481105, 1500012F01Rik, LOC668950, Kcnb1, Ptgis, LOC668951, B4galt5, Slc9a8, Spata2, Zfp313, Snai1, Ube2v1
Downstream geneLOC100043728, Ptpn1, 2310033K02Rik, Pard6b, Adnp, Dpm1, Mocs3, LOC100043908, Kcng1, LOC668952, Nfatc2, Atp9a, Sall4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219K15.bB6Ng01-219K15.g
ACCGA035434GA035435
length1,1041,046
definitionB6Ng01-219K15.b B6Ng01-219K15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(167,679,514 - 167,680,631)(167,472,130 - 167,473,185)
sequence
gaattcattacagctacctgcacaccccacatgggtaactgtcatggtaa
agacagatcttcacagtgtaacagcaaaacacaggactcaggtcaccact
cagtcagaaaatccccaataaatagatgaaatgaaccctgctcctctctt
ccataaagtggaggagcggtacctgggctggcagaatggcttcatgagtt
cattaggtactggccacccttttctctattgctcctctttggcccaagat
agtcacacagattctagccatcacatctgctttccaaacaaccagaagga
agttggtaggaagagacacccttctctatagacatgtcttagcagttact
cagatgctattgcccagaatttagtcacatggccacacatagctgcaagg
gagtcaggaaagtgtagtgttccccaccccatcccaccccctgcctccga
ctgacccataatctagcaaaagtttgggattcctattgtgaaagaagaga
gagagagagacagacagacagacagacagagacagagacagaaacagaga
cagagacagagacagagagagagcaaagcagcagggagggacagcaggga
ccttaataaaattagtaacaatgaaaacaacaatctaagaagagtcttca
gtcacagggtaccactgtacaatgtggggaacagaagaagggcttggaga
tccatataaacatgattgtaactttctaataaaatttcaaaatagggtct
ggacagagggtggctcagtggtaagaacactggctgctgttatagaggct
ccgagttgactttccagcacccaggtgtcagctcacagccttctgaaact
ccctctagtcccaggggacctgctgctctctctggcctctggagacatca
gcacacatgcagcacacagacacacaagcagcaaacaccccaaacacata
agaaaatttttaagttttaaattcaaactggagaagtgactcaaggtaaa
ctggcctttaaggacacaatatgatttggtttggttttgtttgttttccc
tgctttttatttacaagtgtcttttgaagatgtgtgtactcaagtatttg
cgga
gaattctctaggcagacaggagtggaggcctgaactcagcagggaaggca
gagactagagatggaatgcccattctgaaaaggtggctgccctggcttta
acttagcactgactgactcggaatccttgcctgatggaactggtttgaat
tcaatcttctgcctaagcccgaaagcctcaccgacagcttacatgcgagc
acgggattggccctgacttgagggaagactccaggaggctctccgaccca
ccctcctgtgctgttaccaacctcggggatcctcagtccagtcttagggg
actgaccccgggacagtcacacagcccggcatacgcaccttcccgacaat
gggcaggtccacagaaccccatgtatcagcaccccaatgtaccaggccgg
acaggaagtcagcgacgagagcccctgcaactgtgggcaacaagaatgta
agccagggcaggggcactcagagacgtcctcgcccctcctgttggggacc
attccccgctccacaatcttgactgtttattcattatgagatcggagcat
ccgggcccctgcccagtgcacagagtctcacgcaacatccctggttctgg
tctgcacagagcagactcactccctgaggtgggggcatcactgccttcct
aggcctcagctgagctgcctagaatcccagcacctgggaggctgaggtgg
gaggatccagagttagaggctagcctgggctacagcaaacataagcaatt
ccttacttgcaattttgtctccatcccacctatcccacctggcttgtatc
atggactcagttttgagctttccctttgtttagtttttttgtttgttttg
ttttgttttgttttcagacagggttttctctgtatagcctgctgtcctgg
aacttactttgtagaccaggctggcctcgaacccagaaatcgcctgctct
gctctcccaagctgggattaaggtgtgcgccaccacagcggctcttgttt
acttccactgctcagactaagcttgggggtagcccctcccctcccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_167679514_167680631
seq2: B6Ng01-219K15.b_45_1148 (reverse)

seq1  TCCGCAAAATACATGAGTAACAAACACATCTTCAAAAGACACTTTGTAAA  50
      ||||| |||||| |||||   | ||||||||||||||||||| |||||||
seq2  TCCGC-AAATACTTGAGT---ACACACATCTTCAAAAGACAC-TTGTAAA  45

seq1  ATAAAAGCAGGGAAAACAAAACAAAACAAAACAAATCATATTGTGTCCCT  100
        ||||||||||||||||||  ||| |||| ||||||||||||||| |||
seq2  TAAAAAGCAGGGAAAACAAACAAAACCAAACCAAATCATATTGTGT-CCT  94

seq1  TAAAGGCCAGTTTTACCTTGAGTCACCTTCTCCAGTTTGAATTTAAAAAC  150
      |||||||||| |||||||||||||| |||||||||||||||||| |||||
seq2  TAAAGGCCAG-TTTACCTTGAGTCA-CTTCTCCAGTTTGAATTT-AAAAC  141

seq1  TTTAAAAATTTTTCTTATGTGTTTGGGGTGTTTTGCCTGCTTGTGTGTCT  200
      ||  |||| ||||||||||||||||||||||||   ||||||||||||||
seq2  TT--AAAAATTTTCTTATGTGTTTGGGGTGTTT--GCTGCTTGTGTGTCT  187

seq1  GTGTGCTGCATGTGTGCCTGATGTCTCCAGAGGCCAGAGAGAGCAGCAGG  250
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GTGTGCTGCATGTGTG-CTGATGTCTCCAGAGGCCAGAGAGAGCAGCAGG  236

seq1  TCCCCTGGGACTAGAGGGAGTTTCAGAAGGCTGTGAGCTGACACCTGGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTGGGACTAGAGGGAGTTTCAGAAGGCTGTGAGCTGACACCTGGGT  286

seq1  GCTGGAAAGTCAACTCGGAGCCTCTATAACAGCAGCCAGTGTTCTTACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAAAGTCAACTCGGAGCCTCTATAACAGCAGCCAGTGTTCTTACCA  336

seq1  CTGAGCCACCCTCTGTCCAGACCCTATTTTGAAATTTTATTAGAAAGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCCACCCTCTGTCCAGACCCTATTTTGAAATTTTATTAGAAAGTTA  386

seq1  CAATCATGTTTATATGGATCTCCAAGCCCTTCTTCTGTTCCCCACATTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCATGTTTATATGGATCTCCAAGCCCTTCTTCTGTTCCCCACATTGT  436

seq1  ACAGTGGTACCCTGTGACTGAAGACTCTTCTTAGATTGTTGTTTTCATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGGTACCCTGTGACTGAAGACTCTTCTTAGATTGTTGTTTTCATTG  486

seq1  TTACTAATTTTATTAAGGTCCCTGCTGTCCCTCCCTGCTGCTTTGCTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAATTTTATTAAGGTCCCTGCTGTCCCTCCCTGCTGCTTTGCTCTC  536

seq1  TCTCTGTCTCTGTCTCTGTCTCTGTTTCTGTCTCTGTCTCTGTCTGTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTCTCTGTCTCTGTCTCTGTTTCTGTCTCTGTCTCTGTCTGTCTG  586

seq1  TCTGTCTGTCTCTCTCTCTCTCTTCTTTCACAATAGGAATCCCAAACTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTGTCTCTCTCTCTCTCTTCTTTCACAATAGGAATCCCAAACTTT  636

seq1  TGCTAGATTATGGGTCAGTCGGAGGCAGGGGGTGGGATGGGGTGGGGAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGATTATGGGTCAGTCGGAGGCAGGGGGTGGGATGGGGTGGGGAAC  686

seq1  ACTACACTTTCCTGACTCCCTTGCAGCTATGTGTGGCCATGTGACTAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACACTTTCCTGACTCCCTTGCAGCTATGTGTGGCCATGTGACTAAAT  736

seq1  TCTGGGCAATAGCATCTGAGTAACTGCTAAGACATGTCTATAGAGAAGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGCAATAGCATCTGAGTAACTGCTAAGACATGTCTATAGAGAAGGG  786

seq1  TGTCTCTTCCTACCAACTTCCTTCTGGTTGTTTGGAAAGCAGATGTGATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTTCCTACCAACTTCCTTCTGGTTGTTTGGAAAGCAGATGTGATG  836

seq1  GCTAGAATCTGTGTGACTATCTTGGGCCAAAGAGGAGCAATAGAGAAAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAATCTGTGTGACTATCTTGGGCCAAAGAGGAGCAATAGAGAAAAG  886

seq1  GGTGGCCAGTACCTAATGAACTCATGAAGCCATTCTGCCAGCCCAGGTAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCCAGTACCTAATGAACTCATGAAGCCATTCTGCCAGCCCAGGTAC  936

seq1  CGCTCCTCCACTTTATGGAAGAGAGGAGCAGGGTTCATTTCATCTATTTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTCCTCCACTTTATGGAAGAGAGGAGCAGGGTTCATTTCATCTATTTA  986

seq1  TTGGGGATTTTCTGACTGAGTGGTGACCTGAGTCCTGTGTTTTGCTGTTA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGATTTTCTGACTGAGTGGTGACCTGAGTCCTGTGTTTTGCTGTTA  1036

seq1  CACTGTGAAGATCTGTCTTTACCATGACAGTTACCCATGTGGGGTGTGCA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTGAAGATCTGTCTTTACCATGACAGTTACCCATGTGGGGTGTGCA  1086

seq1  GGTAGCTGTAATGAATTC  1118
      ||||||||||||||||||
seq2  GGTAGCTGTAATGAATTC  1104

seq1: chr2_167472130_167473185
seq2: B6Ng01-219K15.g_69_1114

seq1  GAATTCTCTAGGCAGACAGGAGTGGAGGCCTGAACTCAGCAGGGAAGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAGGCAGACAGGAGTGGAGGCCTGAACTCAGCAGGGAAGGCA  50

seq1  GAGACTAGAGATGGAATGCCCATTCTGAAAAGGTGGCTGCCCTGGCTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTAGAGATGGAATGCCCATTCTGAAAAGGTGGCTGCCCTGGCTTTA  100

seq1  ACTTAGCACTGACTGACTCGGAATCCTTGCCTGATGGAACTGGTTTGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGCACTGACTGACTCGGAATCCTTGCCTGATGGAACTGGTTTGAAT  150

seq1  TCAATCTTCTGCCTAAGCCCGAAAGCCTCACCGACAGCTTACATGCGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCTTCTGCCTAAGCCCGAAAGCCTCACCGACAGCTTACATGCGAGC  200

seq1  ACGGGATTGGCCCTGACTTGAGGGAAGACTCCAGGAGGCTCTCCGACCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGATTGGCCCTGACTTGAGGGAAGACTCCAGGAGGCTCTCCGACCCA  250

seq1  CCCTCCTGTGCTGTTACCAACCTCGGGGATCCTCAGTCCAGTCTTAGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCTGTGCTGTTACCAACCTCGGGGATCCTCAGTCCAGTCTTAGGGG  300

seq1  ACTGACCCCGGGACAGTCACACAGCCCGGCATACGCACCTTCCCGACAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACCCCGGGACAGTCACACAGCCCGGCATACGCACCTTCCCGACAAT  350

seq1  GGGCAGGTCCACAGAACCCCATGTATCAGCACCCCAATGTACCAGGCCGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGGTCCACAGAACCCCATGTATCAGCACCCCAATGTACCAGGCCGG  400

seq1  ACAGGAAGTCAGCGACGAGAGCCCCTGCAACTGTGGGCAACAAGAATGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAAGTCAGCGACGAGAGCCCCTGCAACTGTGGGCAACAAGAATGTA  450

seq1  AGCCAGGGCAGGGGCACTCAGAGACGTCCTCGCCCCTCCTGTTGGGGACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGGCAGGGGCACTCAGAGACGTCCTCGCCCCTCCTGTTGGGGACC  500

seq1  ATTCCCCGCTCCACAATCTTGACTGTTTATTCATTATGAGATCGGAGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCCGCTCCACAATCTTGACTGTTTATTCATTATGAGATCGGAGCAT  550

seq1  CCGGGCCCCTGCCCAGTGCACAGAGTCTCACGCAACATCCCTGGTTCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGCCCCTGCCCAGTGCACAGAGTCTCACGCAACATCCCTGGTTCTGG  600

seq1  TCTGCACAGAGCAGACTCACTCCCTGAGGTGGGGGCATCACTGCCTTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCACAGAGCAGACTCACTCCCTGAGGTGGGGGCATCACTGCCTTCCT  650

seq1  AGGCCTCAGCTGAGCTGCCTAGAATCCCAGCACCTGGGAGGCTGAGGTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTCAGCTGAGCTGCCTAGAATCCCAGCACCTGGGAGGCTGAGGTGG  700

seq1  GAGGATCCAGAGTTAGAGGCTAGCCTGGGCTACAGCAAACATAAGCAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATCCAGAGTTAGAGGCTAGCCTGGGCTACAGCAAACATAAGCAATT  750

seq1  CCTTACTTGCAATTTTGTCTCCATCCCACCTATCCCACCTGGCTTGTATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACTTGCAATTTTGTCTCCATCCCACCTATCCCACCTGGCTTGTATC  800

seq1  ATGGACTCAGTTTTGAGCTTTCCCTTTGTTTAGTTTTTTTGTTTTGTTTT  850
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATGGACTCAGTTTTGAGCTTTCCCTTTGTTTAGTTTTTTTG-TTTGTTTT  849

seq1  GTTTTGTTTTGTTTTTCAAGACAGGG-TTTCTCTGTATAGCCCTGGCTGT  899
      |||||||||||||||   |||||||| |||||||||||||||   |||||
seq2  GTTTTGTTTTGTTTT--CAGACAGGGTTTTCTCTGTATAGCC--TGCTGT  895

seq1  CCTGGAACTTACTTTGTAGACCAGGCTGGCCTCGAACCCAGAAATCCGCC  949
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CCTGGAACTTACTTTGTAGACCAGGCTGGCCTCGAACCCAGAAAT-CGCC  944

seq1  TGCCTCTGC-CTCCCAAGGCTGGGATTAAAGGTGTGCGCCACCACAGCCG  998
      || |||||| ||||||| ||||||||| ||||||||||||||||||||  
seq2  TG-CTCTGCTCTCCCAA-GCTGGGATT-AAGGTGTGCGCCACCACAGC--  989

seq1  GGCTCTTTGTTTACTTTCAACCTGCTCAGAACTAGCTT-GGGGTAG-CCC  1046
      ||||| |||||||||| ||  |||||||||   ||||| ||||||| |||
seq2  GGCTC-TTGTTTACTTCCA--CTGCTCAGACTAAGCTTGGGGGTAGCCCC  1036

seq1  TCCCCTCCCC  1056
      ||||||||||
seq2  TCCCCTCCCC  1046