BAC Information

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BAC

Clone NameB6Ng01-219N10
Chromosome2 (Build37)
Map Location 123,930,746 - 123,931,841
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream gene4930517E11Rik, LOC100043360, Sema6d, LOC100043367, LOC100043369, Slc24a5, Myef2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219N10.bB6Ng01-219N10.g
ACCGA035560GA035561
length1,1991,087
definitionB6Ng01-219N10.b B6Ng01-219N10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggccaatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaacagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagccacaaataatataaaatatctcggcg
tgactctaacgaaggaagtgaaagatctgtatgataaaaatttcaagtcc
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggaccaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccattaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
gaggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtgataaaaactgca
tggtactggtatagagacagacaagtggaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ccaaaaccatccagtggaagaaagacagcattttcaacaattggtgctgg
cacactgggttgttatcatgtagaagaatgcgaatcgatccatacttatc
tccttgtactaaggtcaaatctaagtgatcagacttcacataaaccagag
acactgaaacataatagagagaaagtggggaaaggccttggaggatatgg
cacagggaaaatctgaacgacagcaatgccttgtgctgtaagatcgaatg
acatgactatgactccaagtttcttcacaggctaagacacgtgtcctct
gaattcctcagcactgactaccatacctgaaaagaaacatgtcctcctta
attatcagttaattaagtatcaacattaatgatgttaaaaaaataaaaat
taatattaaaatacagtccccataaaagagttagaaataaattttcttct
ttgtcttcacccatattcagctctgcctgagaaaacactcaaatatgcct
cttcagtcaaagtgcactgaactaagatctaccctcgaatgtctttttag
aagcagcatgtaaggcttgctacagggaatttttttatatggacacagag
atatctaaccggaatatctaataatgaaagtgggtagcacactgaattct
tactgcaggtcctgtatgtggccaactagtttatggtctgattggttctc
atgttaagttactatcatcaatagcattagacaggtggttttctgagaag
gcatgtgcagaaagaggaagctgtaggagagggatgtgagcagtatgcaa
ggtgtgctgtgtcttcacagggctaaggggagacatgcttgccttgtctt
gtgtgtctacttaagagaatacttgagtggtttgcattttgaaatattcg
gtctttttaatttacttccaaataatttgtctcgacattatgctgctttg
tctgtggagaacaatacttacacaagtgtttcctaaaagaaagtgaatga
acattgtattctacaaacagacttttcaaataaaaaccattaaggatgaa
tggcatgaattactgaactctctaccatatgtcagagtaggactgttaga
ccaagctcatttacacaattcatagactttaatttacctaagaaatagag
ggataatgcttttaaaacaataaaaataggaccatagtaaatataaaaga
cattaatgatctgtctgttgaccctgggttttctgttttctattgaattg
tctactaagagtcgttgcaaaaaggattgtattataatgcaacattattc
aaattacaggagtttggtgctatcattactgagtaggatggtattgagat
ggaaaaccttgtacatcattacttctacgggaaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_123930746_123931841
seq2: B6Ng01-219N10.g_67_1153

seq1  GAATTCCTCAGCACTGACTACCATACCTGAAAAGAAACATGTCCTCCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCAGCACTGACTACCATACCTGAAAAGAAACATGTCCTCCTTA  50

seq1  ATTATCAGTTAATTAAGTATCAACATTAATGATGTTAAAAAAATAAAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCAGTTAATTAAGTATCAACATTAATGATGTTAAAAAAATAAAAAT  100

seq1  TAATATTAAAATACAGTCCCCATAAAAGAGTTAGAAATAAATTTTCTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTAAAATACAGTCCCCATAAAAGAGTTAGAAATAAATTTTCTTCT  150

seq1  TTGTCTTCACCCATATTCAGCTCTGCCTGAGAAAACACTCAAATATGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTCACCCATATTCAGCTCTGCCTGAGAAAACACTCAAATATGCCT  200

seq1  CTTCAGTCAAAGTGCACTGAACTAAGATCTACCCTCGAATGTCTTTTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTCAAAGTGCACTGAACTAAGATCTACCCTCGAATGTCTTTTTAG  250

seq1  AAGCAGCATGTAAGGCTTGCTACAGGGAATTTTTTTATATGGACACAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGCATGTAAGGCTTGCTACAGGGAATTTTTTTATATGGACACAGAG  300

seq1  ATATCTAACCGGAATATCTAATAATGAAAGTGGGTAGCACACTGAATTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTAACCGGAATATCTAATAATGAAAGTGGGTAGCACACTGAATTCT  350

seq1  TACTGCAGGTCCTGTATGTGGCCAACTAGTTTATGGTCTGATTGGTTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCAGGTCCTGTATGTGGCCAACTAGTTTATGGTCTGATTGGTTCTC  400

seq1  ATGTTAAGTTACTATCATCAATAGCATTAGACAGGTGGTTTTCTGAGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAAGTTACTATCATCAATAGCATTAGACAGGTGGTTTTCTGAGAAG  450

seq1  GCATGTGCAGAAAGAGGAAGCTGTAGGAGAGGGATGTGAGCAGTATGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTGCAGAAAGAGGAAGCTGTAGGAGAGGGATGTGAGCAGTATGCAA  500

seq1  GGTGTGCTGTGTCTTCACAGGGCTAAGGGGAGACATGCTTGCCTTGTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGCTGTGTCTTCACAGGGCTAAGGGGAGACATGCTTGCCTTGTCTT  550

seq1  GTGTGTCTACTTAAGAGAATACTTGAGTGGTTTGCATTTTGAAATATTCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTCTACTTAAGAGAATACTTGAGTGGTTTGCATTTTGAAATATTCG  600

seq1  GTCTTTTTAATTTACTTCCAAATAATTTGTCTCGACATTATGCTGCTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTTAATTTACTTCCAAATAATTTGTCTCGACATTATGCTGCTTTG  650

seq1  TCTGTGGAGAACAATACTTACACAAGTGTTTCCTAAAAGAAAGTGAATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGGAGAACAATACTTACACAAGTGTTTCCTAAAAGAAAGTGAATGA  700

seq1  ACATTGTATTCTACAAACAGACTTTTCAAATAAAAACCATTAAGGATGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGTATTCTACAAACAGACTTTTCAAATAAAAACCATTAAGGATGAA  750

seq1  TGGCATGAATTACTGAACTCTCTACCATATGTCAGAGTAGGACTGTTAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATGAATTACTGAACTCTCTACCATATGTCAGAGTAGGACTGTTAGA  800

seq1  CCAAGCTCATTTACACAATTCATAGACTTTAATTTACCTAAGAAATAGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCTCATTTACACAATTCATAGACTTTAATTTACCTAAGAAATAGAG  850

seq1  GGATAATGCTTTTAAAACAATAAAAATAGGACCATAGTAAATATAAAAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAATGCTTTTAAAACAATAAAAATAGGACCATAGTAAATATAAAAGA  900

seq1  CATTAATGATCTGTCTGTTGACCCTGGGTTTTCTGTTTTCTATTGAATTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAATGATCTGTCTGTTGACCCTGGGTTTTCTGTTTTCTATTGAATTG  950

seq1  TCTACTAAGAGTCGTTGCAAAAAGGATTGTATTAATAATGCAAACATTAT  1000
      ||||||||||||||||||||||||||||||||| ||||||| ||||||||
seq2  TCTACTAAGAGTCGTTGCAAAAAGGATTGTATT-ATAATGC-AACATTAT  998

seq1  TCAAAATTAACAGAAGTTTGGTGCTATCAATTACTGAGGTAGATGGTATT  1050
      |||||  | |||| |||||||||||||| |||||||||   |||||||||
seq2  TCAAA--TTACAGGAGTTTGGTGCTATC-ATTACTGAGTAGGATGGTATT  1045

seq1  GAGAATGGGAAAACTTGTACCATCATTTTACTTCTACCGGAAAAAA  1096
      ||| |||| ||| |||||| |||||  |||||||||| ||||||||
seq2  GAG-ATGGAAAACCTTGTA-CATCA--TTACTTCTACGGGAAAAAA  1087