MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-220B10
Chromosome	2 (Build37)
Map Location	108,861,466 - 108,970,599
singlet/doublet	doublet
Overlap gene	Mett5d1
Upstream gene	LOC100043078, LOC668790, LOC623003, LOC100043423, LOC623031
Downstream gene	Kif18a, Bdnf, LOC100043427, Lin7c, Lgr4, Ccdc34
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100043078 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043078
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC668790 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668790
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC623003 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623003
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	LOC100043423 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043423
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 513 ESTs, 7 Proteins

name	LOC623031 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623031
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 300 ESTs, 8 Proteins

name	Mett5d1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76894 MGI:1924144
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kif18a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228421 MGI:2446977
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bdnf (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12064 MGI:88145
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 4 mRNAs

name	LOC100043427 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043427
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 10 Proteins pseudo : _no_value

name	Lin7c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22343 MGI:1330839
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lgr4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107515 MGI:1891468
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccdc34 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68201 MGI:1915451
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043423 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250001 GeneID:100043423
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 513 ESTs, 7 Proteins product : similar to ribosomal protein L35a transcript_id : XM_001479943.1

name	LOC623031 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94367130 GeneID:623031
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 300 ESTs, 8 Proteins product : similar to Hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit transcript_id : XM_925749.2

name	Mett5d1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386229 GeneID:76894 MGI:1924144
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : methyltransferase 5 domain containing 1 transcript_id : NM_029790.2

name	Kif18a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21314851 GeneID:228421 MGI:2446977
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kinesin family member 18A transcript_id : NM_139303.1

name	Bdnf (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326462 GeneID:12064 MGI:88145
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : brain derived neurotrophic factor transcript_id : NM_007540.4

name	Bdnf (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326456 GeneID:12064 MGI:88145
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : brain derived neurotrophic factor transcript_id : NM_001048139.1

name	Bdnf (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326460 GeneID:12064 MGI:88145
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : brain derived neurotrophic factor transcript_id : NM_001048141.1

name	Bdnf (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326458 GeneID:12064 MGI:88145
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : brain derived neurotrophic factor transcript_id : NM_001048142.1

name	Lin7c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130071 GeneID:22343 MGI:1330839
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lin-7 homolog C (C. elegans) transcript_id : NM_011699.3

name	Lgr4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124430558 GeneID:107515 MGI:1891468
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine-rich repeat-containing G protein-coupled receptor 4 transcript_id : NM_172671.2

name	Ccdc34 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365417 GeneID:68201 MGI:1915451
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 34 transcript_id : NM_026613.3

name	LOC100043423 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250002 GeneID:100043423
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479993.1

name	LOC623031 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:82886628 GeneID:623031
definition	codon_start : 1 product : similar to Hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit protein_id : XP_930842.1

name	Mett5d1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229243 CCDS:CCDS16506.1 GeneID:76894 MGI:1924144
definition	GO_function : GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : methyltransferase 5 domain containing 1 protein_id : NP_084066.2

name	Kif18a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21314852 CCDS:CCDS16507.1 GeneID:228421 MGI:2446977
definition	GO_component : GO:0005874 - microtubule [Evidence IEA]; GO:0005875 - microtubule associated complex [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003777 - microtubule motor activity [Evidence IEA]; GO:0003774 - motor activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007018 - microtubule-based movement [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : kinesin superfamily protein 18A; N-8 kinesin product : kinesin family member 18A protein_id : NP_647464.1

name	Bdnf (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114326463 GeneID:12064 MGI:88145
definition	GO_component : GO:0016023 - cytoplasmic membrane-bound vesicle [Evidence IDA] GO_function : GO:0008083 - growth factor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006916 - anti-apoptosis [Evidence IDA]; GO:0007411 - axon guidance [Evidence IMP]; GO:0007412 - axon target recognition [Evidence IMP]; GO:0016358 - dendrite development [Evidence IMP]; GO:0007631 - feeding behavior [Evidence IMP]; GO:0048839 - inner ear development [Evidence IMP]; GO:0042490 - mechanoreceptor differentiation [Evidence IGI]; GO:0007406 - negative regulation of neuroblast proliferation [Evidence IDA]; GO:0021675 - nerve development [Evidence IMP]; GO:0008038 - neuron recognition [Evidence IMP]; GO:0045666 - positive regulation of neuron differentiation [Evidence IDA]; GO:0019222 - regulation of metabolism [Evidence IMP]; GO:0043523 - regulation of neuron apoptosis [Evidence IDA]; GO:0046668 - regulation of retinal programmed cell death [Evidence IDA]; GO:0001657 - ureteric bud development [Evidence IDA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; brain-derived neurotrophic factor; anorexia BDNF product : brain derived neurotrophic factor isoform 1 protein_id : NP_031566.4

name	Bdnf (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114326457 GeneID:12064 MGI:88145
definition	GO_component : GO:0016023 - cytoplasmic membrane-bound vesicle [Evidence IDA] GO_function : GO:0008083 - growth factor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006916 - anti-apoptosis [Evidence IDA]; GO:0007411 - axon guidance [Evidence IMP]; GO:0007412 - axon target recognition [Evidence IMP]; GO:0016358 - dendrite development [Evidence IMP]; GO:0007631 - feeding behavior [Evidence IMP]; GO:0048839 - inner ear development [Evidence IMP]; GO:0042490 - mechanoreceptor differentiation [Evidence IGI]; GO:0007406 - negative regulation of neuroblast proliferation [Evidence IDA]; GO:0021675 - nerve development [Evidence IMP]; GO:0008038 - neuron recognition [Evidence IMP]; GO:0045666 - positive regulation of neuron differentiation [Evidence IDA]; GO:0019222 - regulation of metabolism [Evidence IMP]; GO:0043523 - regulation of neuron apoptosis [Evidence IDA]; GO:0046668 - regulation of retinal programmed cell death [Evidence IDA]; GO:0001657 - ureteric bud development [Evidence IDA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; brain-derived neurotrophic factor; anorexia BDNF product : brain derived neurotrophic factor isoform 2 protein_id : NP_001041604.1

name	Bdnf (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114326461 GeneID:12064 MGI:88145
definition	GO_component : GO:0016023 - cytoplasmic membrane-bound vesicle [Evidence IDA] GO_function : GO:0008083 - growth factor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006916 - anti-apoptosis [Evidence IDA]; GO:0007411 - axon guidance [Evidence IMP]; GO:0007412 - axon target recognition [Evidence IMP]; GO:0016358 - dendrite development [Evidence IMP]; GO:0007631 - feeding behavior [Evidence IMP]; GO:0048839 - inner ear development [Evidence IMP]; GO:0042490 - mechanoreceptor differentiation [Evidence IGI]; GO:0007406 - negative regulation of neuroblast proliferation [Evidence IDA]; GO:0021675 - nerve development [Evidence IMP]; GO:0008038 - neuron recognition [Evidence IMP]; GO:0045666 - positive regulation of neuron differentiation [Evidence IDA]; GO:0019222 - regulation of metabolism [Evidence IMP]; GO:0043523 - regulation of neuron apoptosis [Evidence IDA]; GO:0046668 - regulation of retinal programmed cell death [Evidence IDA]; GO:0001657 - ureteric bud development [Evidence IDA] codon_start : 1 note : isoform 2 is encoded by transcript variant 3; brain-derived neurotrophic factor; anorexia BDNF product : brain derived neurotrophic factor isoform 2 protein_id : NP_001041606.1

name	Bdnf (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114326459 GeneID:12064 MGI:88145
definition	GO_component : GO:0016023 - cytoplasmic membrane-bound vesicle [Evidence IDA] GO_function : GO:0008083 - growth factor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006916 - anti-apoptosis [Evidence IDA]; GO:0007411 - axon guidance [Evidence IMP]; GO:0007412 - axon target recognition [Evidence IMP]; GO:0016358 - dendrite development [Evidence IMP]; GO:0007631 - feeding behavior [Evidence IMP]; GO:0048839 - inner ear development [Evidence IMP]; GO:0042490 - mechanoreceptor differentiation [Evidence IGI]; GO:0007406 - negative regulation of neuroblast proliferation [Evidence IDA]; GO:0021675 - nerve development [Evidence IMP]; GO:0008038 - neuron recognition [Evidence IMP]; GO:0045666 - positive regulation of neuron differentiation [Evidence IDA]; GO:0019222 - regulation of metabolism [Evidence IMP]; GO:0043523 - regulation of neuron apoptosis [Evidence IDA]; GO:0046668 - regulation of retinal programmed cell death [Evidence IDA]; GO:0001657 - ureteric bud development [Evidence IDA] codon_start : 1 note : isoform 2 is encoded by transcript variant 4; brain-derived neurotrophic factor; anorexia BDNF product : brain derived neurotrophic factor isoform 2 protein_id : NP_001041607.1

name	Lin7c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755973 CCDS:CCDS16509.1 GeneID:22343 MGI:1330839
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0045202 - synapse [Evidence IEA]; GO:0019717 - synaptosome [Evidence IDA]; GO:0005923 - tight junction [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006887 - exocytosis [Evidence IEA]; GO:0007269 - neurotransmitter secretion [Evidence IGI]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : vertebrate homolog of C. elegans Lin-7 type 3 product : lin 7 homolog c protein_id : NP_035829.1

name	Lgr4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124430559 GeneID:107515 MGI:1891468
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0016500 - protein-hormone receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0050673 - epithelial cell proliferation [Evidence IMP]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0030539 - male genitalia development [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA]; GO:0035239 - tube morphogenesis [Evidence IMP] codon_start : 1 note : G protein-coupled receptor GPR48 product : G protein-coupled receptor 48 protein_id : NP_766259.2

name	Ccdc34 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980878 GeneID:68201 MGI:1915451
definition	codon_start : 1 product : coiled-coil domain containing 34 protein_id : NP_080889.2

name	LOC100043078 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043078
definition	number : 3 pseudo : _no_value

name	LOC100043078 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043078
definition	number : 2 pseudo : _no_value

name	LOC100043078 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043078
definition	number : 1 pseudo : _no_value

name	LOC668790 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668790
definition	number : 1 pseudo : _no_value

name	LOC623003 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623003
definition	number : 5 pseudo : _no_value

name	LOC623003 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623003
definition	number : 4 pseudo : _no_value

name	LOC623003 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623003
definition	number : 3 pseudo : _no_value

name	LOC623003 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623003
definition	number : 2 pseudo : _no_value

name	LOC623003 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623003
definition	number : 1 pseudo : _no_value

name	LOC100043427 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250005 GeneID:100043427
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 10 Proteins product : similar to high-mobility group box 1 pseudo : _no_value transcript_id : XR_034482.1

clone name	MSMg01-410H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516O20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-499M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275A18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-545J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166E20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-428M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-195P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396H16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-366H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378I04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-354B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303L06
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-220B10.b	B6Ng01-220B10.g
ACC	GA035736	GA035737
length	1,179	1,164
definition	B6Ng01-220B10.b	B6Ng01-220B10.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(108,861,466 - 108,862,472)	(108,969,419 - 108,970,599)
sequence	gaattctctgtttagctctgtttcccatttttaatagggttatttggttc tctggaatctaacttcttgagttattcgtatatattgaaaactaaccgtc tatcgagggcttggtaaagatcttttcccaatctgttgattgcccttttg ttctattgactgtgctttgccttatgaaagctttggaattttatggggtc ccatttgtcaattcttgatcttaaagcataagccattggtgttctgttca gggaattttttccctgtgcccatttgtcttaggcttttctccactttatt gtctattaaatttagtgtacctggttttatgtggaggtccttgatccact tggacttgagctttgtataaggagatgagaatggaccaatttgcattctt ctacatgttgactgccagttgaaccagcaccatttgttgaaaatgctgtc ttttttccactggatggttttagctcctttgtcaaagatcaagtgatgat aggtgtgtgggtgcacttctaggtcttcaactcaattctattgatctact tgactgccactgtaccaatgtcatgcagtttttatcactatttttctgta gtagagcttgaggttagggatggtgattccccagaagttttttttttttt ttttttttttttattgttgagactagtggtgatatcctcctaattcaaca gtcttcattttcataagatttgacttatctttgaatgctttgaggcagat aattaaaataattgaactattactactaagaagcattgaagttttgaact gggaagagtgataaaatgataaggttcattggcaacagagcaagaatgac catgtggtggcattttatgttgtcttttttcatgaacattaacaatggaa agattaaagtcttcagaaccagagaaaaatgaggtacatgatctgatggt gcaatggttagtgtttcagccacattgtccatactgggaaagaggttaag ggacaaaaggccttaagatatcagggatatggctaatgactaagaaccca cctctcttcatccaggagtagcatgggaccctgggaggaattgatcctca tgggagaaacttgccaccatacctaggaaatggacttccagttctcactg gtggactcaattgtcagtcaggtcaaggt	gaattcactcaaatcattaagctttcatataacaattgtcttatggaata attaaatataattaaaaatattatattctatttaacatataaaatataaa gaattaagttcttaagtttttaaatgacattaataaggttcttttgaact taatatctttcattcaggttggagcagaatttatatgggctctgtaaaca tacagtattttatgataccctccccctccaaatagtttacactgcaggtt agtaggtgatagatgcagcttctcctcacacactttgcccttcttattct tttctccgcaggcaacagtagttgtccttgctgtctttaaggagcactgc atgccattttctgtgagaaaacacattatttattcataagaaaacacaat tttgtctggtactgatatgcaggcttgtagctaacgagaaccctagagat cgttctgttaaaaacctttatctagtaacttgtgaaaacaattctaaaaa gggccagtggtttgctcaaggctacagcctaattaaggacagttagtact aattaaaatttaggagagcattcatttgagacataactgggactatatct ttaagaaattagattagctgttttgtttctagctatgaatctgttaactt ggggaaatcccaatctggtactagataaactgatgtgagcatagaccaga ggaacaatgtaagtattcctcggaacgctgtgatgttagcacattaacac catagcaacaatgaaggaagtgagaatattcacatatgggcaaggaaaaa aatgtgaaaggcattaaaacactgagttctctgagtctgtttttatgtct tcaatatcagtcaatagaaatacaactttattgatggcaaaatgagagtt tgagaaagagaaaggctatgacataccagaattgaactaagagattacaa agtttgatagatctatgcaaagcggtgagattgaagttttccagctaaac cagctcaagccggtggagttcctctgctgaactgtaggaacttttgcaga ctcacaactctcccaaacacttctaaatggaaatgagggatgacaccgag ctcttcttatgaacagtgttatccgatcctagcctgactgagacatgaca gatcatgagacacc
quality values	Open. Hide. 58 33 19 26 58 58 58 58 58 49 62 62 38 39 54 62 62 62 62 62 62 62 62 62 62 42 37 62 62 62 62 47 62 62 49 44 59 62 59 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 54 49 54 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 54 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 54 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 58 58 58 54 54 58 58 58 58 58 58 58 54 58 58 58 54 58 54 58 58 58 58 58 54 58 48 54 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 54 54 54 54 58 58 52 58 58 58 58 58 58 58 58 52 58 54 54 54 54 58 52 58 58 58 58 49 34 49 46 53 53 53 58 58 45 32 58 58 52 58 42 42 51 51 47 38 58 47 41 58 58 53 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 40 53 40 39 44 27 31 46 52 35 51 28 25 17 38 46 58 54 37 52 39 27 40 50 41 39 50 49 51 40 39 43 33 44 32 32 58 37 41 49 43 50 50 53 52 25 44 51 58 44 38 40 33 29 40 26 38 17 39 37 40 41 32 40 41 27 40 52 40 44 34 35 53 35 22 54 50 42 44 49 49 49 26 49 25 31 34 53 32 19 44 34 54 41 54 54 53 40 21 49 37 52 52 32 38 40 52 30 33 41 26 52 45 33 47 37 30 46 24 53 54 31 53 22 52 53 34 31 46 33 40 53 53 46 25 31 40 32 28 18 40 17 32 31 24 53 14 32 34 25 21 32 52 53 29 23 52 32 24 13 32 13 34 26 28 23 21 9 19 32 33 32 22 13 16 25 21 27 9 22 10 17 35 51 13 21 31 18 8 10 14 31 31 27 27 6 6 26 46 35 25 31 48 46 38 20 25 43 21 24 18 13 38 29 41 46 46 46 38 31 22 31 38 31 30 30 12 24 25 20 32 30 17 27 35 29 27 42 48 34 33 36 19 33 21 46 32 32 16 18 25 32 32 21 18 39 27 28 37 18 23 30 6 6 47 48 48 21 33 32 19 14 29 23 19 34 19 31 25 10 13 31 24 31 33 18 19 6 6 15 14 22 14 21 26 30 26 10 26 9 9 14 19 48 30 21 15 13 32 9 7 20 21 37 18 20 10 15 11 39 25 14 21 27 23 39 14 33 48 39 15 15 6 9 29 14 16 34 7 33 11 21 8 4 17 17 21 10 11 31 14 11 8 9 9 17 15 11 10 17 10 22 10 29 11 16 5 10 3 5 20 10 16 22 21 7 23 24 27 13 15 21 7 38 7 7 6 5 9 8 9 5 5 5 11 13 5 6 14 25 11 14 27 6 10 28 7 12 17 20 28 8 20 27 38 21 9 6 21 14 8 13 24 7 7 4 6 21 24 5 8 15 19 21 8 4 6 15 16 16 23 25 8 12 7 22 12 3 4 5 7 16 10 1 5 2 3 5 8 5 13 16 13 6 5 5 25 23 8 8 4 5 21 7 20 17 6 15 5 7 4 21 5 6 4 6 3 2 8 22 11 4 7 9 5 8 2 3 1 6 7 10 8 17 6 1 1 2 5 24 4 1 2 7 5 15 10 3	Open. Hide. 62 47 56 44 62 47 44 59 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 62 54 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 58 58 58 58 58 58 58 58 58 58 58 58 58 40 58 58 58 58 58 54 58 58 58 58 54 58 58 54 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 52 58 54 58 54 54 58 58 54 58 58 58 54 54 54 58 58 54 54 54 54 58 58 58 53 58 51 58 49 58 58 50 58 49 58 50 58 58 53 53 58 58 58 58 58 49 54 47 48 58 51 58 49 58 58 58 49 45 37 58 53 58 53 58 54 58 58 50 58 58 42 58 58 48 33 51 58 51 39 41 58 58 52 58 58 58 33 58 58 58 46 40 58 51 52 50 50 51 58 53 53 52 51 58 43 50 51 58 51 39 41 50 50 43 58 50 58 58 58 50 58 58 44 49 53 58 50 50 58 54 51 51 58 58 39 50 45 53 51 50 51 49 51 54 51 49 52 54 39 41 49 41 54 51 42 53 42 52 39 41 39 40 53 45 53 51 26 54 39 37 52 34 52 51 54 33 40 44 52 53 42 53 39 52 49 42 45 53 32 33 31 45 37 42 53 53 37 35 41 33 53 30 47 40 45 53 40 52 33 33 51 23 51 51 31 46 51 31 53 47 32 39 30 31 47 16 37 42 52 32 41 20 26 5 5 9 36 45 45 40 53 32 40 35 53 37 34 30 53 31 41 31 32 32 51 33 32 41 43 23 46 33 47 46 46 46 46 34 31 33 22 31 32 51 21 12 33 18 31 31 45 31 51 51 43 31 31 31 31 31 42 31 42 43 43 35 32 27 28 33 17 31 32 31 31 13 46 47 46 29 29 31 31 34 38 32 36 43 32 24 31 31 31 36 29 31 31 36 29 25 31 31 27 39 47 32 29 30 31 23 27 24 31 48 31 31 31 30 37 31 32 37 37 24 26 47 47 31 26 31 31 18 31 23 32 48 32 21 33 19 42 48 31 26 31 16 30 48 19 12 24 19 35 31 38 32 31 21 18 36 28 28 31 18 13 26 22 29 31 31 19 25 31 32 18 30 18 33 17 31 21 25 23 13 15 37 12 20 33 48 32 32 32 22 20 21 19 21 32 33 33 30 33 30 14 40 24 23 23 32 33 12 23 34 22 33 17 17 25 20 25 23 26 47 48 37 13 23 26 18 21 23 11 38 21 5 5 16 26 27 28 25 10 15 27 13 11 3 5 11 19 10 28 8 38 24 21 10 14 16 10 28 21 20 28 17 21 24 24 28 20 21 15 8 24 16 14 28 47 47 21 21 20 8 27 9 15 19 6 4 11 3 8 10 9 6 12 22 26 13 7 11 10 5 6 15 8 5 8 5 3 4 18 5 11 15 11 28 9 18 6 9 7 28 16 12 10 15 23 5 4 4 11 9 8 5 16 10 6 16 8 15 18 13 5 19 13 16 10 7 6 6 3 5 9 11 12 18 13 16 6 9 4 7 8 9 13 4 6 5 13 9 16 11 5 6 4 9 6 5 2 3 5 11 5 6 4 3 2 7 13 5 7 4 6 16 5 3 5 2

Alignment Information

BAC End 1

BAC End 2

seq1: chr2_108861466_108862472
seq2: B6Ng01-220B10.b_215_1224

seq1  CCTTATGAAAGCTTTGGAATTTTATGGGGTCCCATTTGTCAATTCTTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATGAAAGCTTTGGAATTTTATGGGGTCCCATTTGTCAATTCTTGAT  50

seq1  CTTAAAGCATAAGCCATTGGTGTTCTGTTCAGGGAATTTTTTCCCTGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAGCATAAGCCATTGGTGTTCTGTTCAGGGAATTTTTTCCCTGTGC  100

seq1  CCATTTGTCTTAGGCTTTTCTCCACTTTATTGTCTATTAAATTTAGTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTGTCTTAGGCTTTTCTCCACTTTATTGTCTATTAAATTTAGTGTA  150

seq1  CCTGGTTTTATGTGGAGGTCCTTGATCCACTTGGACTTGAGCTTTGTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTTTTATGTGGAGGTCCTTGATCCACTTGGACTTGAGCTTTGTATA  200

seq1  AGGAGATGAGAATGGACCAATTTGCATTCTTCTACATGTTGACTGCCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATGAGAATGGACCAATTTGCATTCTTCTACATGTTGACTGCCAGT  250

seq1  TGAACCAGCACCATTTGTTGAAAATGCTGTCTTTTTTCCACTGGATGGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCAGCACCATTTGTTGAAAATGCTGTCTTTTTTCCACTGGATGGTT  300

seq1  TTAGCTCCTTTGTCAAAGATCAAGTGATGATAGGTGTGTGGGTGCACTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTCCTTTGTCAAAGATCAAGTGATGATAGGTGTGTGGGTGCACTTC  350

seq1  TAGGTCTTCAACTCAATTCTATTGATCTACTTGACTGCCACTGTACCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCTTCAACTCAATTCTATTGATCTACTTGACTGCCACTGTACCAAT  400

seq1  GTCATGCAGTTTTTATCACTATTTTTCTGTAGTAGAGCTTGAGGTTAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGCAGTTTTTATCACTATTTTTCTGTAGTAGAGCTTGAGGTTAGGG  450

seq1  ATGGTGATTCCCCAGAAGTTTTTTTTTTTTTTTTTTTTTTTTTATTGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGATTCCCCAGAAGTTTTTTTTTTTTTTTTTTTTTTTTTATTGTTG  500

seq1  AGACTAGTGGTGATATCCTCCTAATTCAACAGTCTTCATTTTCATAAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTAGTGGTGATATCCTCCTAATTCAACAGTCTTCATTTTCATAAGAT  550

seq1  TTGACTTATCTTTGAATGCTTTGAGGCAGATAATTAAAATAATTGAACTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTTATCTTTGAATGCTTTGAGGCAGATAATTAAAATAATTGAACTA  600

seq1  TTACTACTAAGAAGCATTGAAGTTTTGAACT-GGAAGAGTGATAAAATGA  649
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTACTACTAAGAAGCATTGAAGTTTTGAACTGGGAAGAGTGATAAAATGA  650

seq1  TAAGGTTCATTGGCAACAGAGCAAGAATGACCATGT-GTGGCATTTTATG  698
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TAAGGTTCATTGGCAACAGAGCAAGAATGACCATGTGGTGGCATTTTATG  700

seq1  TTGTC-TTTTTCATGAACATTAACAATGGAAAGATTAAAGTCTTCAGAAC  747
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTTTTTCATGAACATTAACAATGGAAAGATTAAAGTCTTCAGAAC  750

seq1  CAGAG-AAAATGAGGTACATGATCTGAT-GTGCAAATGGTTAGTGTTTCA  795
      ||||| |||||||||||||||||||||| |||| ||||||||||||||||
seq2  CAGAGAAAAATGAGGTACATGATCTGATGGTGC-AATGGTTAGTGTTTCA  799

seq1  G-CACATTGTCAATACTGGAAAAGA-GTTAAAGGACAAAAAGCCTTAAAG  843
      | ||||||||| ||||||| ||||| ||||| |||||||| ||||| |||
seq2  GCCACATTGTCCATACTGGGAAAGAGGTTAAGGGACAAAAGGCCTT-AAG  848

seq1  ATATCAAGGATAATTGCTAAATGACTAAGAACACA---CTC-TCATCCAA  889
      |||||| |||| || ||| ||||||||||||| ||   ||| ||||||| 
seq2  ATATCAGGGAT-ATGGCT-AATGACTAAGAACCCACCTCTCTTCATCCAG  896

seq1  GAGTAGCATGGGACCCTGG--AGAAATGAT-CTCATGGAGAAAAACTTGC  936
      |||||||||||||||||||   ||| |||| ||||||| || ||||||||
seq2  GAGTAGCATGGGACCCTGGGAGGAATTGATCCTCATGG-GAGAAACTTGC  945

seq1  AAAACCATACCTAGAATATGACTTTCCATGTTCTACATTGGTAGACTCAA  986
         ||||||||||| | |||   ||||| ||||| || |||| |||||||
seq2  --CACCATACCTAGGAAATGGACTTCCA-GTTCT-CACTGGTGGACTCAA  991

seq1  ATATGTCAGTCAGGGCAAGGT  1007
         ||||||||||| ||||||
seq2  --TTGTCAGTCAGGTCAAGGT  1010

seq1: chr2_108969419_108970599
seq2: B6Ng01-220B10.g_64_1227 (reverse)

seq1  GGTGTCTCATGATTCCTGTCATGTCCTCAGTCAGCTTAGGTATCTGGATA  50
      |||||||||||||  ||||||||| |||||||||  |||| ||| |||||
seq2  GGTGTCTCATGAT--CTGTCATGT-CTCAGTCAGGCTAGG-ATC-GGATA  45

seq1  ACACTGGTTTCATAAGAAGAGCTCGGTGTCATCCCTTCAATTTCCATTTT  100
      ||||||  ||||||||||||||||||||||||||||   |||||||||| 
seq2  ACACTG--TTCATAAGAAGAGCTCGGTGTCATCCCT--CATTTCCATTT-  90

seq1  AAGGAGTGTTTTGGGGAGAGTTGGTGAGTCCTGCAAAAGTTTCCTACAGT  150
       || |||||||  ||||||||| |||||| ||||||||| ||||||||||
seq2  -AGAAGTGTTT--GGGAGAGTT-GTGAGT-CTGCAAAAG-TTCCTACAGT  134

seq1  TCAGCAGAGGAAACTCACCGGCTTGAGCTGGTTTAGCTGGAAAACTTCAA  200
      ||||||||||||   |||||||||||||||||||||||||||||||||||
seq2  TCAGCAGAGGAACTCCACCGGCTTGAGCTGGTTTAGCTGGAAAACTTCAA  184

seq1  TCTCACCGCTTTGCATAGATCTATCAAACTTTGTAATCTCTTAGTTCAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACCGCTTTGCATAGATCTATCAAACTTTGTAATCTCTTAGTTCAAT  234

seq1  TCTGGTATGTCATAGCCTTTCTCTTTCTCAAACTCTCATTTTGCCATCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTATGTCATAGCCTTTCTCTTTCTCAAACTCTCATTTTGCCATCAA  284

seq1  TAAAGTTGTATTTCTATTGACTGATATTGAAGACATAAAAACAGACTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTGTATTTCTATTGACTGATATTGAAGACATAAAAACAGACTCAG  334

seq1  AGAACTCAGTGTTTTAATGCCTTTCACATTTTTTTCCTTGCCCATATGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCAGTGTTTTAATGCCTTTCACATTTTTTTCCTTGCCCATATGTG  384

seq1  AATATTCTCACTTTCCTTCATTGTTGCTATGGTGTTAATGTGCTAACATC  450
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AATATTCTCAC-TTCCTTCATTGTTGCTATGGTGTTAATGTGCTAACATC  433

seq1  ACAGCGTTCCGAGGAATACTTACATTGTTCCTCTGGTCTATGCTCACATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCGTTCCGAGGAATACTTACATTGTTCCTCTGGTCTATGCTCACATC  483

seq1  AGTTTATCTAGTACCAGATTGGGATTTCCCCAAGTTAACAGATTCATAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATCTAGTACCAGATTGGGATTTCCCCAAGTTAACAGATTCATAGC  533

seq1  TAGAAACAAAACAGCTAATCTAATTTCTTAAAGATATAGTCCCAGTTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAACAAAACAGCTAATCTAATTTCTTAAAGATATAGTCCCAGTTATG  583

seq1  TCTCAAATGAATGCTCTCCTAAATTTTAATTAGTACTAACTGTCCTTAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAATGAATGCTCTCCTAAATTTTAATTAGTACTAACTGTCCTTAAT  633

seq1  TAGGCTGTAGCCTTGAGCAAACCACTGGCCCTTTTTAGAATTGTTTTCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTGTAGCCTTGAGCAAACCACTGGCCCTTTTTAGAATTGTTTTCAC  683

seq1  AAGTTACTAGATAAAGGTTTTTAACAGAACGATCTCTAGGGTTCTCGTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTACTAGATAAAGGTTTTTAACAGAACGATCTCTAGGGTTCTCGTTA  733

seq1  GCTACAAGCCTGCATATCAGTACCAGACAAAATTGTGTTTTCTTATGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAAGCCTGCATATCAGTACCAGACAAAATTGTGTTTTCTTATGAAT  783

seq1  AAATAATGTGTTTTCTCACAGAAAATGGCATGCAGTGCTCCTTAAAGACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATGTGTTTTCTCACAGAAAATGGCATGCAGTGCTCCTTAAAGACA  833

seq1  GCAAGGACAACTACTGTTGCCTGCGGAGAAAAGAATAAGAAGGGCAAAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGACAACTACTGTTGCCTGCGGAGAAAAGAATAAGAAGGGCAAAGT  883

seq1  GTGTGAGGAGAAGCTGCATCTATCACCTACTAACCTGCAGTGTAAACTAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAGGAGAAGCTGCATCTATCACCTACTAACCTGCAGTGTAAACTAT  933

seq1  TTGGAGGGGGAGGGTATCATAAAATACTGTATGTTTACAGAGCCCATATA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGGGGGAGGGTATCATAAAATACTGTATGTTTACAGAGCCCATATA  983

seq1  AATTCTGCTCCAACCTGAATGAAAGATATTAAGTTCAAAAGAACCTTATT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGCTCCAACCTGAATGAAAGATATTAAGTTCAAAAGAACCTTATT  1033

seq1  AATGTCATTTAAAAACTTAAGAACTTAATTCTTTATATTTTATATGTTAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCATTTAAAAACTTAAGAACTTAATTCTTTATATTTTATATGTTAA  1083

seq1  ATAGAATATAATATTTTTAATTATATTTAATTATTCCATAAGACAATTGT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAATATAATATTTTTAATTATATTTAATTATTCCATAAGACAATTGT  1133

seq1  TATATGAAAGCTTAATGATTTGAGTGAATTC  1181
      |||||||||||||||||||||||||||||||
seq2  TATATGAAAGCTTAATGATTTGAGTGAATTC  1164

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