BAC Information

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BAC

Clone NameB6Ng01-220O12
Chromosome2 (Build37)
Map Location 112,133,911 - 112,284,224
singlet/doubletdoublet
Overlap geneSlc12a6, Tmem85, EG668839, 2410042D21Rik
Upstream geneOlfr1279, Olfr1280, Olfr1281, Olfr1282, Olfr1283, Olfr1284, LOC100043465, Olfr1285, Olfr1286, Olfr1287, Olfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3
Downstream gene2900064A13Rik, Chrm5, Aven, Ryr3, 4930563P21Rik, Fmn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-220O12.bB6Ng01-220O12.g
ACCGA036347GA036348
length1,1081,124
definitionB6Ng01-220O12.b B6Ng01-220O12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(112,283,110 - 112,284,224)(112,133,911 - 112,134,812)
sequence
gaattcaagtagtgtatgtctgaacattctgactttaatcttgggacttt
gtggttatttatttggagtattaacagctgttgtttcacctgctccagat
ttattaatagtggttacagaaaaaaacctccatattttcacatgccaaat
gaaaaggaccaaaaacaaatgtgagctattattatacacaatcttccaac
ataaaaaagaaaattagatgacaaccaggaccattacagtaagtcatgcc
accacagagtggcgtgctgacagttgtgatgcatacagaaggatgattca
gtattatgagttagaatgaagctatttccaaacttcctgtggagccccaa
gtaaatatgcagccctgagaattatcattcctaaaggaaaccttcccatt
cacagagagctagaagtggctgtcagacttatgtgcggaccagagccacc
ctgggagattagtcagcatcagctgcctcctccacacccacaagacactg
actcagtttggctggaacctgccctatgcacatccctttctataagatcc
tcccaccagggagtctactatgcttcaagttggagagctggtcatctact
cctggagaataattttgtttgcattacacaataagtaatctagtaaaagt
attcattgaaaactatatatgtggagctctattttatatcatttagaaca
ttcactttgtggtataggtgctttagctgcttacgtgactgtgcaccagc
ttttgctgagtgcatggagagaacaaaatggtgtgggatcctctggaaat
gcagttacagatggttgtgagtctccataggggttctgggaatgaatgca
ggcccttgtgaagagcagccagggctcttaaccactaagacatcactcca
agccccaagctttattttttaaacacaatgcttccagtgtggttatcagt
cagtagcaaagttctaaaaggagaaatggtgttaattctgaagtatacaa
tttatgtccagctgtgactcagtaaaacaatgtacaggtttacagcacac
gcttggggtcaaacgtatttgaaactgtagcttgtgttcaggttactaac
aaagaatc
gaattccctcctgtgtcacaggccaccatatcagtcagagagcacttggt
taacccctcacagtaatgtcactcttgtacaagtgagcatatcttgcttt
acaggttggccttgtagttcacagtttacaggtggtgagactgccttagg
gtttccactgctgtgaagggacaccatgaccaaggcaactcttataaaga
acggcgtttaattggggttggctaacaggttctgaggttcagttcaatga
tcatcagacagaagaagcatggcaagaggagctgagagttctacatcttg
ttccaaaggcaaacagaagactagcttccaggcagccaggagaagggtct
caaagcccaccccaaagtgacacacttcctccaacaaggtcacagctcct
aacactgccactgtctgggccaagcatattaaaatcactgcagagactgt
tggtgttctttctctgaatggcctgcatagtgccttctgggattatggaa
gctagccagcagagagaaaggtcccaggtcagttccacctggatttctcc
attcatgcaaccaaggtgtattatcttcagcaatagtgtctttttgtata
gttctgctgggcagccaaaaggaatggcaggagctgatcttgtttgggag
tactcttggggctcctataattgacaactcagtagggacactagggtttt
tatttgatcatttacagttcctaggaaaaatatgttctaaaatctggtta
aaagataagtttcttaaatatatttgtccaaattttagtgtgtgtaggat
tagtctataaactgaaccacttttactgaatgttatatttctgagcatgt
tctagaaagatgacagttttctaggttttaaaagttgttggagggttgga
gagatggctcagcagttacgagccctgactgtcttccagagatcctgagt
taatttcccagcacgacatggtggcttaaaaccatctgtaatgggaatcg
atgccatcttctgatgtgtctgagacagcgacgtgtatacacataagtga
aattaaataatctctttttaagttgttgtttgtagccaagctgcctgacc
tggaagatcattcttaccccagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_112283110_112284224
seq2: B6Ng01-220O12.b_53_1160 (reverse)

seq1  GATTCTATTGTTAGTAA-CTG-ACAC-AGCTACAGTTTCAAATACGTTTT  47
      |||||| |||||||||| ||| |||| ||||||||||||||||||| |||
seq2  GATTCT-TTGTTAGTAACCTGAACACAAGCTACAGTTTCAAATACG-TTT  48

seq1  GACCCCAAAGCCCTGTGCTGTAAACCTGTACATTGTTTTAACCTGAGTCA  97
      ||||||||   | |||||||||||||||||||||||||||  ||||||||
seq2  GACCCCAA--GCGTGTGCTGTAAACCTGTACATTGTTTTA--CTGAGTCA  94

seq1  CAGCTGGACATAAATTTGTTATTACCTTCAGAATTAACACCATTTCTCCT  147
      ||||||||||||||||   ||    |||||||||||||||||||||||||
seq2  CAGCTGGACATAAATTGTATA----CTTCAGAATTAACACCATTTCTCCT  140

seq1  TTTAGAACTTTGCTACTGACTGATAACCACACTGGAAGCATTGTGTTTAA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAACTTTGCTACTGACTGATAACCACACTGGAAGCATTGTGTTTAA  190

seq1  AAAATAAAGCTTGGGGCTTGGAGTGATGTCTTAGTGGTTAAGAGCCCTGG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAGCTTGGGGCTTGGAGTGATGTCTTAGTGGTTAAGAGCCCTGG  240

seq1  CTGCTCTTCACAAGGGCCTGCATTCATTCCCAGAACCCCTATGGAGACTC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTTCACAAGGGCCTGCATTCATTCCCAGAACCCCTATGGAGACTC  290

seq1  ACAACCATCTGTAACTGCATTTCCAGAGGATCCCACACCATTTTGTTCTC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCATCTGTAACTGCATTTCCAGAGGATCCCACACCATTTTGTTCTC  340

seq1  TCCATGCACTCAGCAAAAGCTGGTGCACAGTCACGTAAGCAGCTAAAGCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGCACTCAGCAAAAGCTGGTGCACAGTCACGTAAGCAGCTAAAGCA  390

seq1  CCTATACCACAAAGTGAATGTTCTAAATGATATAAAATAGAGCTCCACAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATACCACAAAGTGAATGTTCTAAATGATATAAAATAGAGCTCCACAT  440

seq1  ATATAGTTTTCAATGAATACTTTTACTAGATTACTTATTGTGTAATGCAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGTTTTCAATGAATACTTTTACTAGATTACTTATTGTGTAATGCAA  490

seq1  ACAAAATTATTCTCCAGGAGTAGATGACCAGCTCTCCAACTTGAAGCATA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATTATTCTCCAGGAGTAGATGACCAGCTCTCCAACTTGAAGCATA  540

seq1  GTAGACTCCCTGGTGGGAGGATCTTATAGAAAGGGATGTGCATAGGGCAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACTCCCTGGTGGGAGGATCTTATAGAAAGGGATGTGCATAGGGCAG  590

seq1  GTTCCAGCCAAACTGAGTCAGTGTCTTGTGGGTGTGGAGGAGGCAGCTGA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCAGCCAAACTGAGTCAGTGTCTTGTGGGTGTGGAGGAGGCAGCTGA  640

seq1  TGCTGACTAATCTCCCAGGGTGGCTCTGGTCCGCACATAAGTCTGACAGC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGACTAATCTCCCAGGGTGGCTCTGGTCCGCACATAAGTCTGACAGC  690

seq1  CACTTCTAGCTCTCTGTGAATGGGAAGGTTTCCTTTAGGAATGATAATTC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTAGCTCTCTGTGAATGGGAAGGTTTCCTTTAGGAATGATAATTC  740

seq1  TCAGGGCTGCATATTTACTTGGGGCTCCACAGGAAGTTTGGAAATAGCTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGCTGCATATTTACTTGGGGCTCCACAGGAAGTTTGGAAATAGCTT  790

seq1  CATTCTAACTCATAATACTGAATCATCCTTCTGTATGCATCACAACTGTC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTAACTCATAATACTGAATCATCCTTCTGTATGCATCACAACTGTC  840

seq1  AGCACGCCACTCTGTGGTGGCATGACTTACTGTAATGGTCCTGGTTGTCA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACGCCACTCTGTGGTGGCATGACTTACTGTAATGGTCCTGGTTGTCA  890

seq1  TCTAATTTTCTTTTTTATGTTGGAAGATTGTGTATAATAATAGCTCACAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTTTCTTTTTTATGTTGGAAGATTGTGTATAATAATAGCTCACAT  940

seq1  TTGTTTTTGGTCCTTTTCATTTGGCATGTGAAAATATGGAGGTTTTTTTC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTTGGTCCTTTTCATTTGGCATGTGAAAATATGGAGGTTTTTTTC  990

seq1  TGTAACCACTATTAATAAATCTGGAGCAGGTGAAACAACAGCTGTTAATA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACCACTATTAATAAATCTGGAGCAGGTGAAACAACAGCTGTTAATA  1040

seq1  CTCCAAATAAATAACCACAAAGTCCCAAGATTAAAGTCAGAATGTTCAGA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAATAAATAACCACAAAGTCCCAAGATTAAAGTCAGAATGTTCAGA  1090

seq1  CATACACTACTTGAATTC  1115
      ||||||||||||||||||
seq2  CATACACTACTTGAATTC  1108

seq1: chr2_112133911_112134812
seq2: B6Ng01-220O12.g_305_1195

seq1  GAGGTTCAGTTCAATGATCATCAGACAGAAGAAGCATGGCAAGAGGAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTCAGTTCAATGATCATCAGACAGAAGAAGCATGGCAAGAGGAGCT  50

seq1  GAGAGTTCTACATCTTGTTCCAAAGGCAAACAGAAGACTAGCTTCCAGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTTCTACATCTTGTTCCAAAGGCAAACAGAAGACTAGCTTCCAGGC  100

seq1  AGCCAGGAGAAGGGTCTCAAAGCCCACCCCAAAGTGACACACTTCCTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGAGAAGGGTCTCAAAGCCCACCCCAAAGTGACACACTTCCTCCA  150

seq1  ACAAGGTCACAGCTCCTAACACTGCCACTGTCTGGGCCAAGCATATTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGTCACAGCTCCTAACACTGCCACTGTCTGGGCCAAGCATATTAAA  200

seq1  ATCACTGCAGAGACTGTTGGTGTTCTTTCTCTGAATGGCCTGCATAGTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTGCAGAGACTGTTGGTGTTCTTTCTCTGAATGGCCTGCATAGTGC  250

seq1  CTTCTGGGATTATGGAAGCTAGCCAGCAGAGAGAAAGGTCCCAGGTCAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGGATTATGGAAGCTAGCCAGCAGAGAGAAAGGTCCCAGGTCAGT  300

seq1  TCCACCTGGATTTCTCCATTCATGCAACCAAGGTGTATTATCTTCAGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTGGATTTCTCCATTCATGCAACCAAGGTGTATTATCTTCAGCAA  350

seq1  TAGTGTCTTTTTGTATAGTTCTGCTGGGCAGCCAAAAGGAATGGCAGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTCTTTTTGTATAGTTCTGCTGGGCAGCCAAAAGGAATGGCAGGAG  400

seq1  CTGATCTTGTTTGGGAGTACTCTTGGGGCTCCTATAATTGACAACTCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCTTGTTTGGGAGTACTCTTGGGGCTCCTATAATTGACAACTCAGT  450

seq1  AGGGACACTAGGGTTTTTATTTGATCATTTACAGTTCCTAGGAAAAATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACACTAGGGTTTTTATTTGATCATTTACAGTTCCTAGGAAAAATAT  500

seq1  GTTCTAAAATCTGGTTAAAAGATAAGTTTCTTAAATATATTTGTCCAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAAAATCTGGTTAAAAGATAAGTTTCTTAAATATATTTGTCCAAAT  550

seq1  TTTAGTGTGTGTAGGATTAGTCTATAAACTGAACCACTTTTACTGAATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTGTGTGTAGGATTAGTCTATAAACTGAACCACTTTTACTGAATGT  600

seq1  TATATTTCTGAGCATGTTCTAGAAAGATGACAGTTTTCTAGGTTTTAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTCTGAGCATGTTCTAGAAAGATGACAGTTTTCTAGGTTTTAAAA  650

seq1  GTTGTTGGAGGGTTGGAGAGATGGCTCAGCAGTTACGAGCACTGACTGTC  700
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GTTGTTGGAGGGTTGGAGAGATGGCTCAGCAGTTACGAGCCCTGACTGTC  700

seq1  TTCCAGAGATCCTGAGTTTAATTCCCAGCAACGACATGGTGGCTTAAAAC  750
      |||||||||||||||||| | |||||||| ||||||||||||||||||||
seq2  TTCCAGAGATCCTGAGTTAATTTCCCAGC-ACGACATGGTGGCTTAAAAC  749

seq1  CATCTGTAATGGGAATCCGATGCCATCTTCTGATGTGTCTGAAGACAGCG  800
      |||||||||||||||| |||||||||||||||||||||||| ||||||||
seq2  CATCTGTAATGGGAAT-CGATGCCATCTTCTGATGTGTCTG-AGACAGCG  797

seq1  ACAGTGTATACACATAAATGAAATAAATAAATCTTCCTTTTTTAAAGTTG  850
      || |||||||||||||| |||||| ||  |||||  ||||||  ||||||
seq2  AC-GTGTATACACATAAGTGAAATTAAATAATCT--CTTTTT--AAGTTG  842

seq1  TTGGTTTTGTAGCCCAAGCTGGCCTTGAACTTG-AGATCATTC-TACCCC  898
      |||  ||||||| ||||||||  | ||| || | ||||||||| ||||||
seq2  TTG--TTTGTAG-CCAAGCTG--CCTGACCTGGAAGATCATTCTTACCCC  887

seq1  AGCC  902
      ||||
seq2  AGCC  891