BAC Information

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BAC

Clone NameB6Ng01-221C10
Chromosome2 (Build37)
Map Location 43,532,713 - 43,533,792
singlet/doubletsinglet
Overlap geneKynu
Upstream geneLOC100041228, LOC100041245
Downstream geneArhgap15, Gtdc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-221C10.bB6Ng01-221C10.g
ACCGA036518GA036519
length1,064874
definitionB6Ng01-221C10.b B6Ng01-221C10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatattaaaaaaaatcctgcttcagctacaggccccaaacatgc
acataaggtaatgtgtgaaacagagttgtccctttctgtctgtttctagg
actcttgcaagtacccaaactctcaacaaccaagttcagaaaacaaaata
gcatcgtactttcatgtgattggaaaaggttggcacattttctgatagac
tataatatataaggatcctacttaatggtacctaatacaacacaattact
gtgtagctatttgtaaacacagtatcatctgggcatagtaaacaaacaaa
caaacaaacaaacaaacaccaaaacctcctaagtctgtatgaggagagtg
ttttcccctgggtgtagactctgtgaatggagatcctatgcatgtggagg
gcaaagtgtccactcgtagtagtccatttgtatctgtaggtgatgaagat
attggagattgttaactaacatttctaacgtttaaaaagaagaggcactt
gcttttactgattctttttataaataaagtttcattgtcttcagtgccag
ccacataagaaaaggagcatttacagccgctgactgtttaagtagggttc
ttcatctagtcacactgtgtgcacattgaagaacagggcggacagagagt
agaaacacacctcaaaattccaaggcccaccctacgacccacttccttgg
gcagaactccacctgctttctaagaccatttcaccagctgggtaccagac
ctgcaaatactggggactgcattcaaaccacgtggcctgaggttttccaa
gtggcctcatagagcagaaaagtctgttccgaagtcccaaactgaactat
taagacagctagggatagtcttagtactggaatgttgccgaaagtaccag
gggattgctcatcagcatggaaaacaaacaaacaaacaacaaacaacaaa
caaacagcaaccaacctaccaacaacaaagaatggttataggagtcagac
gagaaatacacacgtgctgctcgatttccttctggttaattaaattccac
tctttcataatcag

gaattcaagaccagccgatttgcattcttctacatgcccccctccagttg
aaacatcaccattgaaaacgctgttcattttccactggatggttttaact
actttgtcaaagttatgtagtggattacattggtggatttccatatattg
aagtgaacataggtgtgtaggttcttttctgggtcttcaattatattcca
ctgatctacctgactgtcattgtaccgatatcatgcagtttttatcacaa
ttactctgtagtacaggttgaggtcaaggatggtgattcccccagaagtt
cttttattgttgacaatactttttcgttatcctggttttttgttattcca
gatgaatttgtaaattgctttatctaactctatgaagaattgatttggaa
ttttgatgggaattgcatcgatctgtagattgttttcagagatctttcat
cttctgagatcttcaatttcttttttcagagacttgaagtttttgtcata
cagacctttaacttccttagttagagttacagtaacataatttatattat
ttgtgacttttgtgaaaggtgttgtttccctaatttctttctcagcctgt
ttattctttgactagaagaaggcaactgatttgtttgacttaattttata
tccagccactttgctaaagttttttttttttttttttttttgggtcactt
aagtatatgttgtgagccgacccatggctcacatgaactgggtttcacct
ggaggcaccagggctgaaaagaaagggaactagtggtcgaaagaaaaatg
gagctaagtcaagattcctgatcaaagctcaatgtttaatggcaaatgaa
cttataaagggttggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_43532713_43533792
seq2: B6Ng01-221C10.b_48_1111 (reverse)

seq1  CTGATTATTGAAAGAGTGAAATTAAATAAAACCAAGAAGGAAATCGAGCA  50
      ||||||| |||||||||| |||| ||| ||  | ||||||||||||||||
seq2  CTGATTA-TGAAAGAGTGGAATTTAATTAA--CCAGAAGGAAATCGAGCA  47

seq1  GCACGTGTTGTATTTCTCGTCTGACTCCTATTAACCATTCTTTTGTTTGT  100
      ||||||| |||||||||||||||||||||| ||||||||| ||||||   
seq2  GCACGTG-TGTATTTCTCGTCTGACTCCTA-TAACCATTC-TTTGTT--G  92

seq1  TTGGTTGGTTTGGTTGCTTGTTTTGTTTTGTTTGTTTGTTTGTTTGTTTG  150
      ||||| || |||||||||   |||||||   ||||||| |||||||||||
seq2  TTGGTAGG-TTGGTTGCT--GTTTGTTT--GTTGTTTG-TTGTTTGTTTG  136

seq1  TTTGTTTTTCCATGCTGATGAGCAATCCCCTGGTACTTTCGGCAAACATT  200
      |||| |||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTTG-TTTTCCATGCTGATGAGCAATCCCCTGGTACTTTCGGC-AACATT  184

seq1  CCAGTACTAAGACTATCCCTAGCTGTCTTAATAGTTCAGTTTGGGACTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTACTAAGACTATCCCTAGCTGTCTTAATAGTTCAGTTTGGGACTTC  234

seq1  GGAACAGACTTTTCTGCTCTATGAGGCCACTTGGAAAACCTCAGGCCACG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAGACTTTTCTGCTCTATGAGGCCACTTGGAAAACCTCAGGCCACG  284

seq1  TGGTTTGAATGCAGTCCCCAGTATTTGCAGGTCTGGTACCCAGCTGGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTGAATGCAGTCCCCAGTATTTGCAGGTCTGGTACCCAGCTGGTGA  334

seq1  AATGGTCTTAGAAAGCAGGTGGAGTTCTGCCCAAGGAAGTGGGTCGTAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTCTTAGAAAGCAGGTGGAGTTCTGCCCAAGGAAGTGGGTCGTAGG  384

seq1  GTGGGCCTTGGAATTTTGAGGTGTGTTTCTACTCTCTGTCCGCCCTGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCCTTGGAATTTTGAGGTGTGTTTCTACTCTCTGTCCGCCCTGTTC  434

seq1  TTCAATGTGCACACAGTGTGACTAGATGAAGAACCCTACTTAAACAGTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATGTGCACACAGTGTGACTAGATGAAGAACCCTACTTAAACAGTCA  484

seq1  GCGGCTGTAAATGCTCCTTTTCTTATGTGGCTGGCACTGAAGACAATGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGCTGTAAATGCTCCTTTTCTTATGTGGCTGGCACTGAAGACAATGAA  534

seq1  ACTTTATTTATAAAAAGAATCAGTAAAAGCAAGTGCCTCTTCTTTTTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATTTATAAAAAGAATCAGTAAAAGCAAGTGCCTCTTCTTTTTAAA  584

seq1  CGTTAGAAATGTTAGTTAACAATCTCCAATATCTTCATCACCTACAGATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTAGAAATGTTAGTTAACAATCTCCAATATCTTCATCACCTACAGATA  634

seq1  CAAATGGACTACTACGAGTGGACACTTTGCCCTCCACATGCATAGGATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGGACTACTACGAGTGGACACTTTGCCCTCCACATGCATAGGATCT  684

seq1  CCATTCACAGAGTCTACACCCAGGGGAAAACACTCTCCTCATACAGACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCACAGAGTCTACACCCAGGGGAAAACACTCTCCTCATACAGACTT  734

seq1  AGGAGGTTTTGGTGTTTGTTTGTTTGTTTGTTTGTTTGTTTACTATGCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGTTTTGGTGTTTGTTTGTTTGTTTGTTTGTTTGTTTACTATGCCC  784

seq1  AGATGATACTGTGTTTACAAATAGCTACACAGTAATTGTGTTGTATTAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGATACTGTGTTTACAAATAGCTACACAGTAATTGTGTTGTATTAGG  834

seq1  TACCATTAAGTAGGATCCTTATATATTATAGTCTATCAGAAAATGTGCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATTAAGTAGGATCCTTATATATTATAGTCTATCAGAAAATGTGCCA  884

seq1  ACCTTTTCCAATCACATGAAAGTACGATGCTATTTTGTTTTCTGAACTTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTTCCAATCACATGAAAGTACGATGCTATTTTGTTTTCTGAACTTG  934

seq1  GTTGTTGAGAGTTTGGGTACTTGCAAGAGTCCTAGAAACAGACAGAAAGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTGAGAGTTTGGGTACTTGCAAGAGTCCTAGAAACAGACAGAAAGG  984

seq1  GACAACTCTGTTTCACACATTACCTTATGTGCATGTTTGGGGCCTGTAGC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACTCTGTTTCACACATTACCTTATGTGCATGTTTGGGGCCTGTAGC  1034

seq1  TGAAGCAGGATTTTTTTTAATATAGAATTC  1080
      ||||||||||||||||||||||||||||||
seq2  TGAAGCAGGATTTTTTTTAATATAGAATTC  1064


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