BAC Information

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BAC

Clone NameB6Ng01-221C15
Chromosome2 (Build37)
Map Location 76,056,700 - 76,215,185
singlet/doubletdoublet
Overlap genePde11a, Cyct, Drbp1
Upstream geneLOC100040324, LOC667828, Hnrpa3, Nfe2l2, E030042O20Rik, LOC623453, Agps, Ttc30b, Ttc30a2, Ttc30a1
Downstream geneOsbpl6, Prkra, Dfnb59, Fkbp7, Plekha3, Ttn, 2610301F02Rik, Sestd1, LOC623706, LOC667906
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-221C15.bB6Ng01-221C15.g
ACCGA036528GA036529
length1,158992
definitionB6Ng01-221C15.b B6Ng01-221C15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,214,055 - 76,215,185)(76,056,700 - 76,057,683)
sequence
gaattctttattttgtgagagttaaaatatcttttatggtgaatgatttt
tatataaaaaaagataacattcttgagggtttatttactaaggtattgtt
ggattttaaactataaaataggaaaaacggaggggccagaagaaggtagt
gagattaaagtacatgatatacctaacaaaaatgtcattgtggggctggc
gagatggctcagtggataagagcactgactgctctcccaaaggtcctgag
ttcaaatcccagcaaccacatggtggctcatgaccatccatatgagatct
gacaacctcttctggtgcttctgaagacagctacagtgtacttctgtata
ataaaaaataaatctttgggccagagtagactctggcttcatatggttaa
aaaaaaaaaaaaaaaaaaaaaagaaaagaaaaaagaaaaaaaattcactg
aataataaacctgtatgttaacaaaaagaactaaaacaaacaacaacaaa
aaccacctagaaaaagaaaacataaacttcctgcagcataaacagcataa
gaaagtatcatgtgtgaatgaaaactgatttcacagagcactgcaaactt
aacaacagcaaaacatcattttaccgtaatttgaataaggatctcgcgga
acctcacaatactccaggcctgggacgatgtcaaaaatgctgaagagctg
ctcttccgtgaaggggactctcgacaccaccgacaggcgtttggagacag
cttcttggcctctgctatcgttcttgtcaaaagttgaaaattcagattgc
tgttctccaactatatatatagaatacacacacatacatatttatacata
attacacatatataaatgaataattaaatttctatacattaaaatttatg
taaccattttgcacatgatatttaaaatgtctaaacatgagacacttata
ttttgtatttattcttttaaaaatatattttaatttatcctctgaggagt
tcattacacgttatacaggtacgtttttgatcatatcttacccctggtct
tttggtagtactggtaggtattctaccaacatagaagaaggccagtgtgg
aacagggaaaggtaatgacagctttcgccccacttccttaacctcaaata
taggaact
gaattcaataaacatgctaaacatgcttgcaacttactgaaaaaaaaata
tcacttgtagtaggaattgacatagacaaagcccttctatcgattgggca
ggcaggattctgggagtcaggcatgatgttcagatttctctaagaattat
ctccctctgatcctcacagatatacattctaccagtagctgcacttttgt
aagatgaggaatgagatttgtaagggtaccaaacgctcttgggagataat
tcttcatggcttttccctcctccccacaccactctctctctcgtcagcac
attttacagaggcgcgcactgtcaaggatgtttgcacaatgaatgccctt
cgaaggcagacacagcatctccttgctagtaaaaagcagaattatttgct
atgcaatataataaagattatttctcccactggacgggtagcttcagttg
ccttgagtttgaggttgctcctgctccacgtgaagttataagtctaagag
tccagcacaaacgccgatgctcttgttagttttcttcctgttagtaataa
actagtctctgtcacagaaccaggagtcttgtatctcttgccagcgttcc
agagataacgtccttgcaagtgaagtagaatatgactttttaataatcaa
caaggccacctagatggcaggtggtggtggtggggctgagtttctttatt
taattcagtcagttttgaggctggaacctactgttttcacatctatggga
acctgcctctcagagaagtatgaatctctcatatggttactgcgatggtc
tagtttaactgccgcacgagaggaggtggggattagatgtttgagaggct
ctgagaggctgtagaggttctgggttctggagaagaaaggtttcttatga
aaacctaaccctcgggtgagttgttgaactgtgtgtgtcatagcctatcc
tcaccaagtgtatatacctttgagagatgctgtaatacggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_76214055_76215185
seq2: B6Ng01-221C15.b_43_1200 (reverse)

seq1  AGTT-CTATA-TTGAAGTTAAGGAAGT-GGGCG-AAGCTGTC--TAC--T  42
      |||| ||||| |||| ||||||||||| ||||| ||||||||  |||  |
seq2  AGTTCCTATATTTGAGGTTAAGGAAGTGGGGCGAAAGCTGTCATTACCTT  50

seq1  TTCCTGT----CACTG--CTTC-TCTATGGTTGTAGAATA-CTA-CAGTA  83
      | |||||    |||||  |||| |||||| | |||||||| ||| |||||
seq2  TCCCTGTTCCACACTGGCCTTCTTCTATGTTGGTAGAATACCTACCAGTA  100

seq1  CTA-CAAAAGA-CAGGGGT-AGATATGATC-AAAACGTA-CTGTAT-ACG  127
      ||| ||||||| ||||||| |||||||||| |||||||| |||||| |||
seq2  CTACCAAAAGACCAGGGGTAAGATATGATCAAAAACGTACCTGTATAACG  150

seq1  TGT-ATGAACT-CTCAGAGGATAAATTAAAATATATTTTTAAAAGAAT-A  174
      ||| ||||||| |||||||||||||||||||||||||||||||||||| |
seq2  TGTAATGAACTCCTCAGAGGATAAATTAAAATATATTTTTAAAAGAATAA  200

seq1  ATACAAAATAT-AGTGTCTCATGTTTAGACATTTTAAATATCATTGTGCA  223
      ||||||||||| ||||||||||||||||||||||||||||||| ||||||
seq2  ATACAAAATATAAGTGTCTCATGTTTAGACATTTTAAATATCA-TGTGCA  249

seq1  AAATGGTTACATAATTTTTAATGTATAGAAATTTAATTATTCATTTATAT  273
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AAATGGTTACATAAATTTTAATGTATAGAAATTTAATTATTCATTTATAT  299

seq1  ATGTGT-ATTATGTATAAATATGTATGTGTGTGTATTCTATATATATAGT  322
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTAATTATGTATAAATATGTATGTGTGTGTATTCTATATATATAGT  349

seq1  TGGAGAACAGCAATCTGAATTTTCAACTTTTGACAAGAACGATAGCAGAG  372
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAACAGCAATCTGAATTTTCAACTTTTGACAAGAACGATAGCAGAG  399

seq1  GCCAAGAAGCTGTCTCCAAACGCCTGTCGGTGGTGTCGAGAGTCCCCTTC  422
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGAAGCTGTCTCCAAACGCCTGTCGGTGGTGTCGAGAGTCCCCTTC  449

seq1  ACGGAAGAGCAGCTCTTCAGCATTTTTGACATCGTCCCAGGCCTGGAGTA  472
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGAAGAGCAGCTCTTCAGCATTTTTGACATCGTCCCAGGCCTGGAGTA  499

seq1  TTGTGAGGTTCCGCGAGATCCTTATTCAAATTACGGTAAAATGATGTTTT  522
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAGGTTCCGCGAGATCCTTATTCAAATTACGGTAAAATGATGTTTT  549

seq1  GCTGTTGTTAAGTTTGCAGTGCTCTGTGAAATCAGTTTTCATTCACACAT  572
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTGTTAAGTTTGCAGTGCTCTGTGAAATCAGTTTTCATTCACACAT  599

seq1  GATACTTTCTTATGCTGTTTATGCTGCAGGAAGTTTATGTTTTCTTTTTC  622
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTTTCTTATGCTGTTTATGCTGCAGGAAGTTTATGTTTTCTTTTTC  649

seq1  TAGGTGGTTTTTGTTGTTGTTTGTTTTAGTTCTTTTTGTTAACATACAGG  672
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGGTTTTTGTTGTTGTTTGTTTTAGTTCTTTTTGTTAACATACAGG  699

seq1  TTTATTATTCAGTGAATTTTTTTTCTTTTTTCTTTTCTTTTTTTTTTTTT  722
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTATTCAGTGAATTTTTTTTCTTTTTTCTTTTCTTTTTTTTTTTTT  749

seq1  TTTTTTTTTTTAACCATGTGAAGCCAGAGTCTACTCTGGCCCAAAGATTT  772
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTAACCATATGAAGCCAGAGTCTACTCTGGCCCAAAGATTT  799

seq1  ATTTTTTATTATACAGAAGTACACTGTAGCTGTCTTCAGAAGCACCAGAA  822
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTATTATACAGAAGTACACTGTAGCTGTCTTCAGAAGCACCAGAA  849

seq1  GAGGTTGTCAGATCTCATATGGATGGTCATGAGCCACCATGTGGTTGCTG  872
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTGTCAGATCTCATATGGATGGTCATGAGCCACCATGTGGTTGCTG  899

seq1  GGATTTGAACTCAGGACCTTTGGGAGAGCAGTCAGTGCTCTTATCCACTG  922
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTGAACTCAGGACCTTTGGGAGAGCAGTCAGTGCTCTTATCCACTG  949

seq1  AGCCATCTCGCCAGCCCCACAATGACATTTTTGTTAGGTATATCATGTAC  972
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATCTCGCCAGCCCCACAATGACATTTTTGTTAGGTATATCATGTAC  999

seq1  TTTAATCTCACTACCTTCTTCTGGCCCCTCCGTTTTTCCTATTTTATAGT  1022
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCTCACTACCTTCTTCTGGCCCCTCCGTTTTTCCTATTTTATAGT  1049

seq1  TTAAAATCCAACAATACCTTAGTAAATAAACCCTCAAGAATGTTATCTTT  1072
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATCCAACAATACCTTAGTAAATAAACCCTCAAGAATGTTATCTTT  1099

seq1  TTTTATATAAAAATCATTCACCATAAAAGATATTTTAACTCTCACAAAAT  1122
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATATAAAAATCATTCACCATAAAAGATATTTTAACTCTCACAAAAT  1149

seq1  AAAGAATTC  1131
      |||||||||
seq2  AAAGAATTC  1158

seq1: chr2_76056700_76057683
seq2: B6Ng01-221C15.g_65_1056

seq1  GAATTCAATAAACATGCTAAACATGCTTGCAACTTACTGAAAAAAAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAAACATGCTAAACATGCTTGCAACTTACTGAAAAAAAAATA  50

seq1  TCACTTGTAGTAGGAATTGACATAGACAAAGCCCTTCTATCGATTGGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTGTAGTAGGAATTGACATAGACAAAGCCCTTCTATCGATTGGGCA  100

seq1  GGCAGGATTCTGGGAGTCAGGCATGATGTTCAGATTTCTCTAAGAATTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGATTCTGGGAGTCAGGCATGATGTTCAGATTTCTCTAAGAATTAT  150

seq1  CTCCCTCTGATCCTCACAGATATACATTCTACCAGTAGCTGCACTTTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCTGATCCTCACAGATATACATTCTACCAGTAGCTGCACTTTTGT  200

seq1  AAGATGAGGAATGAGATTTGTAAGGGTACCAAACGCTCTTGGGAGATAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGAGGAATGAGATTTGTAAGGGTACCAAACGCTCTTGGGAGATAAT  250

seq1  TCTTCATGGCTTTTCCCTCCTCCCCACACCACTCTCTCTCTCGTCAGCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATGGCTTTTCCCTCCTCCCCACACCACTCTCTCTCTCGTCAGCAC  300

seq1  ATTTTACAGAGGCGCGCACTGTCAAGGATGTTTGCACAATGAATGCCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTACAGAGGCGCGCACTGTCAAGGATGTTTGCACAATGAATGCCCTT  350

seq1  CGAAGGCAGACACAGCATCTCCTTGCTAGTAAAAAGCAGAATTATTTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGGCAGACACAGCATCTCCTTGCTAGTAAAAAGCAGAATTATTTGCT  400

seq1  ATGCAATATAATAAAGATTATTTCTCCCACTGGACGGGTAGCTTCAGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAATATAATAAAGATTATTTCTCCCACTGGACGGGTAGCTTCAGTTG  450

seq1  CCTTGAGTTTGAGGTTGCTCCTGCTCCACGTGAAGTTATAAGTCTAAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAGTTTGAGGTTGCTCCTGCTCCACGTGAAGTTATAAGTCTAAGAG  500

seq1  TCCAGCACAAACGCCGATGCTCTTGTTAGTTTTCTTCCTGTTAGTAATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCACAAACGCCGATGCTCTTGTTAGTTTTCTTCCTGTTAGTAATAA  550

seq1  ACTAGTCTCTGTCACAGAACCAGGAGTCTTGTATCTCTTGCCAGCGTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTCTCTGTCACAGAACCAGGAGTCTTGTATCTCTTGCCAGCGTTCC  600

seq1  AGAGATAACGTCCTTGCAAGTGAAGTAGAATATGACTTTTTAATAATCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATAACGTCCTTGCAAGTGAAGTAGAATATGACTTTTTAATAATCAA  650

seq1  CAAGGCCACCTAGATGGCAGGTGGTGGTGGTGGGGCTGAGTTTC-TTATT  699
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CAAGGCCACCTAGATGGCAGGTGGTGGTGGTGGGGCTGAGTTTCTTTATT  700

seq1  TAATTCAGTCAG-TTTGAGGCTGGAACCTACTGTTTTCACATCTATGGGA  748
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TAATTCAGTCAGTTTTGAGGCTGGAACCTACTGTTTTCACATCTATGGGA  750

seq1  ACCTGCCTCTCAGAGAAGTATGAATCTCTCATATGGTTACTGCGATGGTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCCTCTCAGAGAAGTATGAATCTCTCATATGGTTACTGCGATGGTC  800

seq1  TAG-TTAACTGCCGCACGAGAGGAGGTGGGGATTAGATGTTTGAGAGGCT  847
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTAACTGCCGCACGAGAGGAGGTGGGGATTAGATGTTTGAGAGGCT  850

seq1  CTGAGAGGCTGTAGAGGTTCT-GGTTCTGGAGAAGAAAGGTTTCTAGTGA  896
      ||||||||||||||||||||| |||||||||||||||||||||||  |||
seq2  CTGAGAGGCTGTAGAGGTTCTGGGTTCTGGAGAAGAAAGGTTTCTTATGA  900

seq1  TAACCT-ACCCTCGGGTGAGTTGCTGAGCTG-ATGGGTCAAAGCCAATCC  944
       ||||| |||||||||||||||| ||| |||  || |||| |||| ||||
seq2  AAACCTAACCCTCGGGTGAGTTGTTGAACTGTGTGTGTCATAGCCTATCC  950

seq1  TCACCAAG-GAATAGACC-TTGAGAGATGCTGTAAGACGGTT  984
      |||||||| | ||| ||| |||||||||||||||| ||||||
seq2  TCACCAAGTGTATATACCTTTGAGAGATGCTGTAATACGGTT  992