BAC Information

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BAC

Clone NameB6Ng01-221O08
Chromosome2 (Build37)
Map Location 159,789,082 - 159,790,227
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043689
Downstream geneGm826, Mafb, LOC100043892, Top1, Plcg1, Zhx3, Lpin3, Emilin3, Chd6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-221O08.bB6Ng01-221O08.g
ACCGA037062GA037063
length1,2021,155
definitionB6Ng01-221O08.b B6Ng01-221O08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagcctggctgttcctca
gaaaattggacatagtactaccggaggacccagcaatacctctcctgggc
atgtatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagttggaaagaacccagat
gcccctcaacagaggaatggatacagaaaacgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
tggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaag
gaactcacacaatatgtactcactgataagtggatattagcccagaaact
taggatacccaagatagaaaatacaatttgctaaacgcatgaaactcaag
aagaacgaagaccaaagtgtggacactttgtcccttcttagaattgggaa
caaaacacccatggaaggcgttacagagacaaagtttggagctgtgacaa
aaggatggaccatctagagcctgccatatccggggttccatcccataatc
agtttccaaacgctgacaccattccataccctagcaagaatttggctgaa
aggacccatatatagctgtctattgtgagagtatgccagggcctagcaaa
cacagaagttggatgctcacagtcagctcttaaatggatcacagggcccc
caatggaaggagcttagagaaagtacccaaggagctaaagggatctgcac
cacttatagtgaaaacaccaatatgaactaccagtacccgctgctctttg
tcttctagctgcaatattgtattcaaaggatgcctagtccggccatcact
gaaagagaggccattggtacttggcaaccttatatgccattacaggtaat
tcagcaaatgggagtcgtggtatgccaagtgtggtcagctgcacttcacg
ct
gaattcccttttctctaaattcaatatctgaacatgtatgtttctttagt
atgtgaatcatttaattttttgatttactaccacgagcaaatgctcaaca
actagttctctggtggaacaaaaacacaatatttttaggatgagaagaat
ttcctgaaataatcccaccatggctaatgtcatgtcactatgatgtcagc
agaggcagagttggaaagcaattgttaggaacacattgccatttaccaca
taccattttatacacaacacacacacacacacacacacagtggacattta
gaacataaatgtaaaatagacataaatgacatcatgttcacagataatct
aacctgtagcaaaacaactaagaagtagggagtcaagtacgtatttgttt
ctgttttaagtaatttgtttaattatgattatatataatttaagattaga
tagtggctttcctttacagagtaatgtgttccctgacagtcagctctggt
gaagatattccagctaggttcaacccttggtcgcactctgtgtgcttgag
aacactattatcagtgttcttccgcttttcttcatttaactctcccatgt
agacactgcagcagacgttttacaatatgaaaactaaactgatataaagt
gtgtctgatttcagagaacacagacaacctggaagaagtggcaagtgttt
taaaaattaagaaaatagttatactcaagaatgagagagtagtaagaagg
acagttgttgccagaacaacctaaaggtaacttaaccacagaactcagtt
ctggaaaaggtacacagcctagcattttcaagagcagtacaataggcaca
actggaattcaaatgccatgtggttatttgtggattagaaaagttctgcc
cagtttacaatcccaccagcaatgggaggagtattcctctttctccacat
cctctccaccatgtgttgttccttgaagttttaatcttagccattctggt
ttgtgtagttgatcttcaggtcatttttatttgcatttcttctgatcact
taggactttggacattttcttttaggtgctttctaggcccattcgagatt
ccttcagttgtgattcctcagttttagtttcttttatacctgttttttga
atggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_159789082_159790227
seq2: B6Ng01-221O08.g_68_1222

seq1  GAATTCCCTTTTCTCTAAATTCAATATCTGAACATGTATGTTTCTTTAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTTTTCTCTAAATTCAATATCTGAACATGTATGTTTCTTTAGT  50

seq1  ATGTGAATCATTTAATTTTTTGATTTACTACCACGAGCAAATGCTCAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAATCATTTAATTTTTTGATTTACTACCACGAGCAAATGCTCAACA  100

seq1  ACTAGTTCTCTGGTGGAACAAAAACACAATATTTTTAGGATGAGAAGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTTCTCTGGTGGAACAAAAACACAATATTTTTAGGATGAGAAGAAT  150

seq1  TTCCTGAAATAATCCCACCATGGCTAATGTCATGTCACTATGATGTCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGAAATAATCCCACCATGGCTAATGTCATGTCACTATGATGTCAGC  200

seq1  AGAGGCAGAGTTGGAAAGCAATTGTTAGGAACACATTGCCATTTACCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAGAGTTGGAAAGCAATTGTTAGGAACACATTGCCATTTACCACA  250

seq1  TACCATTTTATACACAACACACACACACACACACACACAGTGGACATTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATTTTATACACAACACACACACACACACACACACAGTGGACATTTA  300

seq1  GAACATAAATGTAAAATAGACATAAATGACATCATGTTCACAGATAATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATAAATGTAAAATAGACATAAATGACATCATGTTCACAGATAATCT  350

seq1  AACCTGTAGCAAAACAACTAAGAAGTAGGGAGTCAAGTACGTATTTGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGTAGCAAAACAACTAAGAAGTAGGGAGTCAAGTACGTATTTGTTT  400

seq1  CTGTTTTAAGTAATTTGTTTAATTATGATTATATATAATTTAAGATTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTAAGTAATTTGTTTAATTATGATTATATATAATTTAAGATTAGA  450

seq1  TAGTGGCTTTCCTTTACAGAGTAATGTGTTCCCTGACAGTCAGCTCTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGCTTTCCTTTACAGAGTAATGTGTTCCCTGACAGTCAGCTCTGGT  500

seq1  GAAGATATTCCAGCTAGGTTCAACCCTTGGTCGCACTCTGTGTGCTTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATATTCCAGCTAGGTTCAACCCTTGGTCGCACTCTGTGTGCTTGAG  550

seq1  AACACTATTATCAGTGTTCTTCCGCTTTTCTTCATTTAACTCTCCCATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTATTATCAGTGTTCTTCCGCTTTTCTTCATTTAACTCTCCCATGT  600

seq1  AGACACTGCAGCAGACGTTTTACAATATGAAAACTAAACTGATATAAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACTGCAGCAGACGTTTTACAATATGAAAACTAAACTGATATAAAGT  650

seq1  GTGTCTGATTTCAGAGAACACAGACAACCTGGAAGAAGTGGCAAGTGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTGATTTCAGAGAACACAGACAACCTGGAAGAAGTGGCAAGTGTTT  700

seq1  TAAAAATTAAGAAAATAGTTATACTCAAGAATGAGAGAGTAGTAAGAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATTAAGAAAATAGTTATACTCAAGAATGAGAGAGTAGTAAGAAGG  750

seq1  ACAGTTGTTGCCAGAACAACCTAAAGGTAACTTAACCACAGAACTCAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ACAGTTGTTGCCAGAACAACCTAAAGGTAACTTAACCACAGAACTCA-GT  799

seq1  TCTGGAAAAGGTACACAGCCTAGCA-TTTCAAGAGCAGTACAATAGGCAC  849
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TCTGGAAAAGGTACACAGCCTAGCATTTTCAAGAGCAGTACAATAGGCAC  849

seq1  AACTGGAATTCAAATGCCATGTGG-TAATTGTGGATTAGAAAAGTTCTGC  898
      |||||||||||||||||||||||| || ||||||||||||||||||||||
seq2  AACTGGAATTCAAATGCCATGTGGTTATTTGTGGATTAGAAAAGTTCTGC  899

seq1  CCAGTTTACAATCCCACCAGCAAT-GGAGGAGTATTCCTCTTTCTCCACA  947
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CCAGTTTACAATCCCACCAGCAATGGGAGGAGTATTCCTCTTTCTCCACA  949

seq1  TCCTCTCCAACATGTGTTGTTCCTTGAAGTTTTAATCTTAGCCATTCTGG  997
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTCCACCATGTGTTGTTCCTTGAAGTTTTAATCTTAGCCATTCTGG  999

seq1  TTGGTGTAAGGTGGAATCTCAAGGTCATTTTTATTTGCATTTC-TCTGAT  1046
      || |||||  || | ||||  |||||||||||||||||||||| ||||||
seq2  TTTGTGTA--GTTG-ATCTTCAGGTCATTTTTATTTGCATTTCTTCTGAT  1046

seq1  CACTAAGGACTTTGAACATTT--CTTTAGGTGC-TTCTAAG-CCATTCGA  1092
      |||| ||||||||| ||||||   ||||||||| ||||| | ||||||||
seq2  CACTTAGGACTTTGGACATTTTCTTTTAGGTGCTTTCTAGGCCCATTCGA  1096

seq1  GATT-CTTCAGTTGTGAATTCTCAG-TTTAG-TTCTAT--AACCTGTTTT  1137
      |||| |||||||||||| | ||||| ||||| |||| |   |||||||||
seq2  GATTCCTTCAGTTGTGATTCCTCAGTTTTAGTTTCTTTTATACCTGTTTT  1146

seq1  TTGATTGGG  1146
      |||| ||||
seq2  TTGAATGGG  1155