MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-222N13
Chromosome	2 (Build37)
Map Location	101,418,297 - 101,573,330
singlet/doublet	doublet
Overlap gene	B230118H07Rik, Rag2, Rag1, LOC100042930, Traf6, 2600010E01Rik
Upstream gene	LOC668705
Downstream gene	LOC100043302, Commd9, Ldlrad3, LOC674202, Trim44, Fjx1, E430002G05Rik, Slc1a2
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC668705 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668705
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 12 Proteins pseudo : _no_value

name	B230118H07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68170 MGI:1915420
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rag2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19374 MGI:97849
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rag1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19373 MGI:97848
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042930 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042930
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Traf6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22034 MGI:108072
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2600010E01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72446 MGI:1919696
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100043302 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043302
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Commd9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76501 MGI:1923751
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ldlrad3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241576 MGI:2138856
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC674202 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:674202
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 441 ESTs, 4 Proteins pseudo : _no_value

name	Trim44 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80985 MGI:1931835
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fjx1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14221 MGI:1341907
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	E430002G05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:210622 MGI:2445082
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc1a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20511 MGI:101931
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	B230118H07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375303 GeneID:68170 MGI:1915420
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA B230118H07 gene transcript_id : NM_026592.3

name	Rag2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144227233 GeneID:19374 MGI:97849
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : recombination activating gene 2 transcript_id : NM_009020.3

name	Rag1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133778932 GeneID:19373 MGI:97848
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : recombination activating gene 1 transcript_id : NM_009019.2

name	LOC100042930 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249906 GeneID:100042930
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : hypothetical protein LOC100042930 transcript_id : XM_001479093.1

name	Traf6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38348245 GeneID:22034 MGI:108072
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Tnf receptor-associated factor 6 transcript_id : NM_009424.2

name	2600010E01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:139948240 GeneID:72446 MGI:1919696
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2600010E01 gene transcript_id : NM_175181.4

name	2600010E01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:139949021 GeneID:72446 MGI:1919696
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2600010E01 gene transcript_id : NM_001083810.1

name	LOC100043302 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249965 GeneID:100043302
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043302 transcript_id : XM_001479675.1

name	Commd9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384915 GeneID:76501 MGI:1923751
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : COMM domain containing 9 transcript_id : NM_029635.2

name	Ldlrad3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124001548 GeneID:241576 MGI:2138856
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : low density lipoprotein receptor class A domain containing 3 transcript_id : NM_178886.2

name	Trim44 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68989253 GeneID:80985 MGI:1931835
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tripartite motif-containing 44 transcript_id : NM_020267.2

name	Fjx1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47059107 GeneID:14221 MGI:1341907
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : four jointed box 1 (Drosophila) transcript_id : NM_010218.2

name	E430002G05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982079 GeneID:210622 MGI:2445082
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA E430002G05 gene transcript_id : NM_173749.3

name	Slc1a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347512 GeneID:20511 MGI:101931
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 1 (glial high affinity glutamate transporter), member 2 transcript_id : NM_001077514.2

name	Slc1a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892173 GeneID:20511 MGI:101931
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 1 (glial high affinity glutamate transporter), member 2 transcript_id : NM_011393.2

name	Slc1a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117606274 GeneID:20511 MGI:101931
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 1 (glial high affinity glutamate transporter), member 2 transcript_id : NM_001077515.1

name	B230118H07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386078 CCDS:CCDS16461.1 GeneID:68170 MGI:1915420
definition	codon_start : 1 note : Rag1/Rag2/Nwc fusion; Rag1/Rag2/Nwc fusion protein; Rag1/Nwc fusion; Rag1/Nwc fusion protein product : hypothetical protein LOC68170 protein_id : NP_080868.1

name	Rag2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677661 CCDS:CCDS16462.1 GeneID:19374 MGI:97849
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004518 - nuclease activity [Evidence IEA] GO_process : GO:0030183 - B cell differentiation [Evidence IMP]; GO:0006310 - DNA recombination [Evidence TAS]; GO:0030217 - T cell differentiation [Evidence IMP] codon_start : 1 note : recombination activating protein 2; recombinase activating gene 2 product : recombination activating gene 2 protein_id : NP_033046.1

name	Rag1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:133778933 CCDS:CCDS16463.1 GeneID:19373 MGI:97848
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004518 - nuclease activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030183 - B cell differentiation [Evidence IDA]; GO:0006310 - DNA recombination [Evidence TAS] codon_start : 1 note : recombinase activating gene 1; recombination activating protein 1; recombination-activating gene 1 product : recombination activating gene 1 protein_id : NP_033045.2

name	LOC100042930 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249907 GeneID:100042930
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479143.1

name	Traf6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38348246 CCDS:CCDS16464.1 GeneID:22034 MGI:108072
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence TAS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0019886 - antigen processing and presentation of exogenous peptide antigen via MHC class II [Evidence IMP]; GO:0048468 - cell development [Evidence IMP]; GO:0006955 - immune response [Evidence IMP]; GO:0043011 - myeloid dendritic cell differentiation [Evidence IMP]; GO:0042475 - odontogenesis (sensu Vertebrata) [Evidence IMP]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0001503 - ossification [Evidence IMP]; GO:0045084 - positive regulation of interleukin-12 biosynthesis [Evidence IMP]; GO:0045410 - positive regulation of interleukin-6 biosynthesis [Evidence IMP]; GO:0042981 - regulation of apoptosis [Evidence IEA]; GO:0051023 - regulation of immunoglobulin secretion [Evidence IDA]; GO:0007165 - signal transduction [Evidence IDA]; GO:0042088 - T-helper 1 type immune response [Evidence IMP]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : Tnf receptor-associated factor 6 protein_id : NP_033450.2

name	2600010E01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:139949022 GeneID:72446 MGI:1919696
definition	codon_start : 1 product : hypothetical protein LOC72446 protein_id : NP_001077279.1

name	2600010E01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:139948241 GeneID:72446 MGI:1919696
definition	codon_start : 1 product : hypothetical protein LOC72446 protein_id : NP_780390.3

name	LOC100043302 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249966 GeneID:100043302
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479725.1

name	Commd9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313224 CCDS:CCDS16465.1 GeneID:76501 MGI:1923751
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : COMM domain containing 9 protein_id : NP_083911.1

name	Ldlrad3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124001549 GeneID:241576 MGI:2138856
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 product : low density lipoprotein receptor class A domain containing 3 protein_id : NP_849217.2

name	Trim44 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:68989254 CCDS:CCDS16466.1 GeneID:80985 MGI:1931835
definition	GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] codon_start : 1 note : brain cDNA 7; DIPB product : DIPB protein protein_id : NP_064663.2

name	Fjx1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47059108 CCDS:CCDS16467.1 GeneID:14221 MGI:1341907
definition	GO_component : GO:0005615 - extracellular space [Evidence IDA] codon_start : 1 product : four jointed box 1 protein_id : NP_034348.2

name	E430002G05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982080 CCDS:CCDS16468.1 GeneID:210622 MGI:2445082
definition	GO_function : GO:0008233 - peptidase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : regeneration associated muscle protease protein_id : NP_776110.2

name	Slc1a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117606277 GeneID:20511 MGI:101931
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005386 - carrier activity [Evidence IEA]; GO:0017153 - sodium:dicarboxylate symporter activity [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006835 - dicarboxylic acid transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; glial high affinity glutamate transporter; solute carrier family 1, member 2 product : excitatory amino acid transporter 2 isoform 1 protein_id : NP_001070982.1

name	Slc1a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117606275 GeneID:20511 MGI:101931
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005386 - carrier activity [Evidence IEA]; GO:0017153 - sodium:dicarboxylate symporter activity [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006835 - dicarboxylic acid transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; glial high affinity glutamate transporter; solute carrier family 1, member 2 product : excitatory amino acid transporter 2 isoform 2 protein_id : NP_001070983.1

name	Slc1a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7106409 CCDS:CCDS16469.1 GeneID:20511 MGI:101931
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005386 - carrier activity [Evidence IEA]; GO:0017153 - sodium:dicarboxylate symporter activity [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006835 - dicarboxylic acid transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 3 is encoded by transcript variant 3; glial high affinity glutamate transporter; solute carrier family 1, member 2 product : excitatory amino acid transporter 2 isoform 3 protein_id : NP_035523.1

name	LOC668705 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149249905 GeneID:668705
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 12 Proteins product : similar to Pyruvate kinase, muscle pseudo : _no_value transcript_id : XR_035699.1

name	LOC674202 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149249969 GeneID:674202
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 441 ESTs, 4 Proteins product : similar to ribosomal protein pseudo : _no_value transcript_id : XR_034336.1

clone name	MSMg01-311J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483N14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-502L04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-051B08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-437K09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-483N14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-502L04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-145I06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-465L19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-322K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085L21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-149H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525N22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-263E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327I09
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-222N13.b	B6Ng01-222N13.g
ACC	GA037752	GA037753
length	336	1,035
definition	B6Ng01-222N13.b	B6Ng01-222N13.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(101,418,297 - 101,418,632)	(101,572,313 - 101,573,330)
sequence	aagaatgcatactgttggaggccaacacagttccttatgcacagtgaatt ctaaaccaatactcggaagcaggaaatgaatgtgatgtgtacttacagta aaaacccctcaataggaatctccagcctcaaggtatgtctactctgagag agctgcacacacacagaaaacaagacacaaaattcccaacagcatgaacc ccacagcagaaaccaagaagttgatccacatatacctaggtttttttttt ttccctgatctgattaggaaaactcttccttaccttggataaattattaa aaaaaagaagaaggaggaggaggaggaggaggagga	gaattcagggcttagctcccaaatatggagcgtggaaaaggagcccctga ggattctaggactgaggttaggaggctggactccactttctgtttctgtt ttgacttataacgccatccagtattacttacttccccttcagctgtgtca aaatacctgacaaacacaacttagaaggggaactgcttacttaagcttac agtcatcgttgcggagaaggcacagtaacgggaaggtgaggcagctggcc acgctgtatcttgtatctgtatcagcaagtagagagagatgaatgctggt gttcagctggcttcctctttctatgcagcctgagaccacagcccaggcaa tggctctgtgcgtgaggtgggtgggtcttcccacccctattaacctagat atgctgcccaaggggtgtttccatagtgacagtcaagtttaactaccata catctctttccatgtatggtcatggctgccttttgaggaccctccccatc tgaaagtggagcatgcagacctgtttctgtaacaaaagccttttgaggtt ctggggtttgtgtggaacaacccaacaatacatgacatcaccccccttaa agtctctgaaggtgtaccagaatgtctatctactctggcctgtccccttt ccccaccacggtgtgtatatgcagttctttgcagctgatcttagggaatc tgctcagtgtgtccctgggcctaaagccccttcattccctccatcagaca ttagaacctgactctctatgctgacctgtgctgtggccttccctggttcc ctgcagggctaagggtcttggtgctcatttttttctctgctctaaacact tgttgtccagagcaactcttaaacttcctcccctatgctgtgccctcagc actctttgttcattataagtaatgttgctcattgagctatggcttcaaaa aagtggattggaaaccagtttggaagacccagattccttggccctgaatt cccatgatggctttccttctttagggagtgaggaa
quality values	Open. Hide. 26 47 54 62 42 38 59 62 59 62 62 62 62 62 62 62 62 62 62 62 59 59 59 49 62 43 34 43 33 27 28 48 32 34 32 42 43 54 62 59 62 62 59 62 62 62 59 54 54 62 62 62 62 62 62 62 59 62 62 62 62 62 49 49 62 62 62 62 62 62 62 56 62 62 54 62 54 54 62 62 42 42 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 59 62 62 62 62 59 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 49 49 49 56 59 62 43 62 59 56 62 62 62 62 59 50 56 62 56 56 56 44 56 56 46 46 62 62 62 62 62 62 62 62 56 62 56 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 56 38 62 56 56 62 62 56 62 62 62 46 62 62 62 62 62 62 62 62 62 62 56 62 62 40 47 20	Open. Hide. 62 47 47 38 62 47 37 62 62 62 62 32 27 11 9 21 24 22 21 21 21 34 32 38 50 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 54 54 49 62 62 62 49 49 43 33 33 54 62 59 44 42 43 54 62 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 54 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 59 40 29 36 56 59 56 56 62 62 62 59 59 59 46 59 59 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 51 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 56 62 62 56 56 56 56 56 51 62 62 54 62 62 62 62 62 62 62 45 62 56 54 56 62 62 51 51 38 62 62 56 62 62 62 62 62 62 62 62 47 43 62 62 62 56 62 56 47 56 56 56 56 62 62 56 62 36 31 25 56 62 62 62 62 62 62 56 62 54 47 62 62 62 62 28 34 20 23 18 25 47 39 31 28 29 62 45 46 52 54 62 52 62 62 62 62 62 62 62 33 46 38 35 38 54 54 54 58 46 58 58 54 42 52 50 47 34 33 58 31 17 36 9 23 13 12 17 13 52 28 58 34 31 46 27 42 39 58 54 41 54 42 54 52 52 54 42 54 37 24 25 19 12 15 21 46 54 52 54 52 32 29 44 52 42 32 54 40 52 39 47 30 54 53 46 52 50 52 35 46 50 47 46 36 29 30 26 19 21 51 46 50 29 37 39 53 41 47 27 37 30 45 30 16 47 47 58 18 19 34 40 39 40 48 25 58 34 27 33 18 26 23 28 36 30 46 46 54 58 42 51 34 39 51 46 25 7 49 50 40 51 51 50 34 18 14 9 31 42 50 40 28 12 52 22 18 13 35 19 24 34 25 47 29 58 51 37 50 31 36 38 29 50 31 40 49 26 29 31 46 24 49 53 35 13 51 16 49 15 50 39 31 39 13 41 32 28 21 17 46 24 32 17 30 40 35 10 16 45 37 20 14 17 26 37 32 54 33 24 21 7 17 15 42 31 6 30 14 42 44 22 4 13 16 14 20 22 34 54 54 49 42 40 37 11 9 24 12 16 11 17 35 32 31 29 24 21 12 14 7 8 25 7 37 24 23 28 20 38 15 25 13 21 45 34 16 7 6 31 34 31 32 37 28 27 33 39 11 20 7 15 6 10 6 12 18 17 21 30 22 12 11 17 47 12 6 8 26 8 9 8 18 7 27 8 45 24 28 9 7 9 14 16 14 9 7 19 13 9 26 8 9 7 17 10 11 11 14 27 22 10 31 25 31 24 20 9 6 6 7 25 24 18 10 12 24 18 8 11 37 38 32 22 21 12 19 10 11 13 33 31 13 41 17 30 37 25 12 19 7 8 6 15 31 23 6 7 6 15 7 13 9 9 9 9 7 6 6 10 25 21 19 41 27 27 31 10 27 19 16 22 21 9 7 9 39 27 21 29 32 19 20 37 33 21 8 25 17 12 5 29 26 19 8 6 6 21 9 25 14 26 17 14 24 16

Alignment Information

BAC End 1

BAC End 2

seq1: chr2_101418297_101418632
seq2: B6Ng01-222N13.b_50_385

seq1  AAGAATGCATACTGTTGGAGGCCAACACAGTTCCTTATGCACAGTGAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGCATACTGTTGGAGGCCAACACAGTTCCTTATGCACAGTGAATT  50

seq1  CTAAACCAATACTCGGAAGCAGGAAATGAATGTGATGTGTACTTACAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACCAATACTCGGAAGCAGGAAATGAATGTGATGTGTACTTACAGTA  100

seq1  AAAACCCCTCAATAGGAATCTCCAGCCTCAAGGTATGTCTACTCTGAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCCCTCAATAGGAATCTCCAGCCTCAAGGTATGTCTACTCTGAGAG  150

seq1  AGCTGCACACACACAGAAAACAAGACACAAAATTCCCAACAGCATGAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCACACACACAGAAAACAAGACACAAAATTCCCAACAGCATGAACC  200

seq1  CCACAGCAGAAACCAAGAAGTTGATCCACATATACCTAGGTTTTTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGCAGAAACCAAGAAGTTGATCCACATATACCTAGGTTTTTTTTTT  250

seq1  TTCCCTGATCTGATTAGGAAAACTCTTCCTTACCTTGGATAAATTATTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTGATCTGATTAGGAAAACTCTTCCTTACCTTGGATAAATTATTAA  300

seq1  AAAAAAGAAGAAGGAGGAGGAGGAGGAGGAGGAGGA  336
      ||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGAAGAAGGAGGAGGAGGAGGAGGAGGAGGA  336

seq1: chr2_101572313_101573330
seq2: B6Ng01-222N13.g_71_1105 (reverse)

seq1  TTCCTCACTTCTAAAGGAAG--AAGCCATCATGGG-ACTCAGG--CCAGG  45
      ||||||||| |  || ||||  ||||||||||||| | |||||  | |||
seq2  TTCCTCACTCCCTAAAGAAGGAAAGCCATCATGGGAATTCAGGGCCAAGG  50

seq1  GATCTTGGGTTCTTCCTAACTGG-TTCCA--TCACTTTCT--GAGCCAT-  89
       ||||  || |||||| |||||| |||||   |||||| |   |||||| 
seq2  AATCT--GGGTCTTCCAAACTGGTTTCCAATCCACTTTTTTGAAGCCATA  98

seq1  GCTCAATGAGCACC--TACTT-TTATG-ACCAAGGGTGCTGAGGGCACAG  135
      |||||||||||| |  ||||| | ||| || ||| |||||||||||||||
seq2  GCTCAATGAGCAACATTACTTATAATGAACAAAGAGTGCTGAGGGCACAG  148

seq1  CATA-GGGAAGAAGTTTAAGAGTTGCTCTGGACAAC-AGTGTTTAGAGCA  183
      |||| |||| |||||||||||||||||||||||||| |||||||||||||
seq2  CATAGGGGAGGAAGTTTAAGAGTTGCTCTGGACAACAAGTGTTTAGAGCA  198

seq1  GAGAAAAAAATGAGCACCAAGACCC-TAGCCCTGCAGGG-ACCA-GGAAG  230
      ||||||||||||||||||||||||| ||||||||||||| |||| |||||
seq2  GAGAAAAAAATGAGCACCAAGACCCTTAGCCCTGCAGGGAACCAGGGAAG  248

seq1  GCCACAGCACAGGTCAGCATTAGAGAGTCAGGTTCTAATGTCTGATGGAG  280
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GCCACAGCACAGGTCAGCA-TAGAGAGTCAGGTTCTAATGTCTGATGGAG  297

seq1  GG-ATGAAGGGGCTTTAGGCCCAGGGACACACTTGAGCAGATTCCCTAAG  329
      || ||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GGAATGAAGGGGCTTTAGGCCCAGGGACACAC-TGAGCAGATTCCCTAAG  346

seq1  ATCAGCTGCAAAGAACTGCATATACACACCGTGGTGGGGAAAGGGGACAG  379
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCTGCAAAGAACTGCATATACACACCGTGGTGGGGAAAGGGGACAG  396

seq1  GCCAGAGTAGATAGACATTCTGGTACACCTTCAGAGACTTTAAGGGGGGT  429
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAGTAGATAGACATTCTGGTACACCTTCAGAGACTTTAAGGGGGGT  446

seq1  GATGTCATGTATTGTTGGGTTGTTCCACACAAACCCCAGAACCTCAAAAG  479
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCATGTATTGTTGGGTTGTTCCACACAAACCCCAGAACCTCAAAAG  496

seq1  GCTTTTGTTACAGAAACAGGTCTGCATGCTCCACTTTCAGATGGGGAGGG  529
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGTTACAGAAACAGGTCTGCATGCTCCACTTTCAGATGGGGAGGG  546

seq1  TCCTCAAAAGGCAGCCATGACCATACATGGAAAGAGATGTATGGTAGTTA  579
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAAAAGGCAGCCATGACCATACATGGAAAGAGATGTATGGTAGTTA  596

seq1  AACTTGACTGTCACTATGGAAACACCCCTTGGGCAGCATATCTAGGTTAA  629
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGACTGTCACTATGGAAACACCCCTTGGGCAGCATATCTAGGTTAA  646

seq1  TAGGGGTGGGAAGACCCACCCACCTCACGCACAGAGCCATTGCCTGGGCT  679
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGTGGGAAGACCCACCCACCTCACGCACAGAGCCATTGCCTGGGCT  696

seq1  GTGGTCTCAGGCTGCATAGAAAGAGGAAGCCAGCTGAACACCAGCATTCA  729
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCTCAGGCTGCATAGAAAGAGGAAGCCAGCTGAACACCAGCATTCA  746

seq1  TCTCTCTCTACTTGCTGATACAGATACAAGATACAGCGTGGCCAGCTGCC  779
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTACTTGCTGATACAGATACAAGATACAGCGTGGCCAGCTGCC  796

seq1  TCACCTTCCCGTTACTGTGCCTTCTCCGCAACGATGACTGTAAGCTTAAG  829
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTTCCCGTTACTGTGCCTTCTCCGCAACGATGACTGTAAGCTTAAG  846

seq1  TAAGCAGTTCCCCTTCTAAGTTGTGTTTGTCAGGTATTTTGACACAGCTG  879
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAGTTCCCCTTCTAAGTTGTGTTTGTCAGGTATTTTGACACAGCTG  896

seq1  AAGGGGAAGTAAGTAATACTGGATGGCGTTATAAGTCAAAACAGAAACAG  929
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGAAGTAAGTAATACTGGATGGCGTTATAAGTCAAAACAGAAACAG  946

seq1  AAAGTGGAGTCCAGCCTCCTAACCTCAGTCCTAGAATCCTCAGGGGCTCC  979
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGGAGTCCAGCCTCCTAACCTCAGTCCTAGAATCCTCAGGGGCTCC  996

seq1  TTTTCCACGCTCCATATTTGGGAGCTAAGCCCTGAATTC  1018
      |||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCACGCTCCATATTTGGGAGCTAAGCCCTGAATTC  1035

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BAC

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Alignment Information