BAC Information

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BAC

Clone NameB6Ng01-222P05
Chromosome2 (Build37)
Map Location 75,704,849 - 75,825,349
singlet/doubletdoublet
Overlap geneAgps, Ttc30b, Ttc30a2, Ttc30a1
Upstream geneMtx2, LOC667817, A330043C09Rik, LOC667739, LOC545423, LOC100040324, LOC667828, Hnrpa3, Nfe2l2, E030042O20Rik, LOC623453
Downstream genePde11a, Cyct, Drbp1, Osbpl6, Prkra, Dfnb59, Fkbp7, Plekha3, Ttn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222P05.bB6Ng01-222P05.g
ACCGA037828GA037829
length7601,147
definitionB6Ng01-222P05.b B6Ng01-222P05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,824,591 - 75,825,349)(75,704,849 - 75,706,016)
sequence
gaattccactgccttctctgtatgtcagagtttcgcttattttagtcaag
tcattaggctgactttactcaatctactttgtagaacaattatttttaaa
acccagttctcttgctgaccctggtgagttacagaaaggcacacacacac
acacacactaatcatcgtttatagtaatagaaacaatgcaaccaaaatct
aaatatgtttggaataaatccaaatataaagaaaaatgcattggcatggg
cccggggaagacaaaaagattaacaacagtaactgaatgtaacctaattt
gggaccttaagagctctgtcacgcctcctttagtgaattctgaatgtttc
atagcagcaaactgggactgtttttctgccatgtgctgtcaagagctccc
acaccccaattatactaggagtttagaggttaagtctggctattagtggc
caaagtatcacacacttcctaagtcagcagctctcaacctgtgtgtggag
atccctttgggggtcacacatcaggcgtcctacatagcagatatatattt
acattaaaattcatagcaggagaaagttacaatgctgaagtggcaatgag
ggtaattgtatggttgggggccacgacaccatgaggaactgtgttaaagg
gtcgcagcgttagtaaggttgagagccactgcgctaactgaacaataact
agaacacaaacagaaataaaccaggctgtgtctggagaatttcatggggg
ggggaggggg
gaattcagcaccgtgggaggatggatatctactcgagcgtcaggcatgaa
gaaaaatatctatggcaatattgaggacctggtaaatttatttctagtta
ctgtctaacttaaaatacacaaatacctagtttacaagtttatcaagagt
ttagtcttttttggtgatattcttgctgtaggagattttatatttgcctt
ttctgaaggaattcttttttctctgtacagttgaagaacctcactgaaat
ggttctgttgagtagttatataagctgtcatgttaaacatgtgccagtct
tctgggagcacgacagtgttgtgactctgggccccttattagatatttgg
tgacatttattgcatttgagcttttctggggattaggtgcatgaccttgg
caaattggtttacctttcccagcttcactttgcttttctgtaaaatcaat
aatttatattagaactattatttgagtaaaggacattaaaagaaaatttc
accaatctgatgtatagtaggttcttcatgatttttttgttaatattcag
tatttcgataatatttatttaacttgatattttcctgcatgatcttgcta
cttagcctaggctggcctcaaacttgcaattttcctatttccatttcatt
tgctggggttacaggcaggcaatgctggtagttgattgtactttagaaga
acctatgaggctgtttaattgaagtaatattcctaacattgttcttggtt
tgcttttcaagcctaagttctcagggtttttattaatacttccgttgaga
ggaatatcagataaatttcacgagagacagtagctcttaccagtatccag
tattttacatgaactctttcaaaatgcttcgtattctgtttaagaaatga
aaaactacagttttctttttgtattaaatctaaacccagttgtagagaaa
ctaattttgggtgtagattatagagcttatagtcaaacagtacttgatag
accactgcagtgtgtagtactttttttccctaagattttttaagggacat
gatgtgcataacacctaacatgctactgcatgagtattattgtagacaat
ttatgtttgaacttcctttgtacttaagtccttgagcctaagttgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_75824591_75825349
seq2: B6Ng01-222P05.b_46_805 (reverse)

seq1  CCCCCT-CCCCCCCCATGAAATTCTCCAGACACAGCCTGGTTTATTTCTG  49
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTCCCCCCCCCATGAAATTCTCCAGACACAGCCTGGTTTATTTCTG  50

seq1  TTTGTGTTCTAGTTATTGTTCAGTTAGCGCAGTGGCTCTCAACCTTACTA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTTCTAGTTATTGTTCAGTTAGCGCAGTGGCTCTCAACCTTACTA  100

seq1  ACGCTGCGACCCTTTAACACAGTTCCTCATGGTGTCGTGGCCCCCAACCA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTGCGACCCTTTAACACAGTTCCTCATGGTGTCGTGGCCCCCAACCA  150

seq1  TACAATTACCCTCATTGCCACTTCAGCATTGTAACTTTCTCCTGCTATGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATTACCCTCATTGCCACTTCAGCATTGTAACTTTCTCCTGCTATGA  200

seq1  ATTTTAATGTAAATATATATCTGCTATGTAGGACGCCTGATGTGTGACCC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAATGTAAATATATATCTGCTATGTAGGACGCCTGATGTGTGACCC  250

seq1  CCAAAGGGATCTCCACACACAGGTTGAGAGCTGCTGACTTAGGAAGTGTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGGGATCTCCACACACAGGTTGAGAGCTGCTGACTTAGGAAGTGTG  300

seq1  TGATACTTTGGCCACTAATAGCCAGACTTAACCTCTAAACTCCTAGTATA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACTTTGGCCACTAATAGCCAGACTTAACCTCTAAACTCCTAGTATA  350

seq1  ATTGGGGTGTGGGAGCTCTTGACAGCACATGGCAGAAAAACAGTCCCAGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGGTGTGGGAGCTCTTGACAGCACATGGCAGAAAAACAGTCCCAGT  400

seq1  TTGCTGCTATGAAACATTCAGAATTCACTAAAGGAGGCGTGACAGAGCTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGCTATGAAACATTCAGAATTCACTAAAGGAGGCGTGACAGAGCTC  450

seq1  TTAAGGTCCCAAATTAGGTTACATTCAGTTACTGTTGTTAATCTTTTTGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGTCCCAAATTAGGTTACATTCAGTTACTGTTGTTAATCTTTTTGT  500

seq1  CTTCCCCGGGCCCATGCCAATGCATTTTTCTTTATATTTGGATTTATTCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCCGGGCCCATGCCAATGCATTTTTCTTTATATTTGGATTTATTCC  550

seq1  AAACATATTTAGATTTTGGTTGCATTGTTTCTATTACTATAAACGATGAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATATTTAGATTTTGGTTGCATTGTTTCTATTACTATAAACGATGAT  600

seq1  TAGTGTGTGTGTGTGTGTGTGCCTTTCTGTAACTCACCAGGGTCAGCAAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTGTGTGTGTGTGTGTGCCTTTCTGTAACTCACCAGGGTCAGCAAG  650

seq1  AGAACTGGGTTTTAAAAATAATTGTTCTACAAAGTAGATTGAGTAAAGTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGGGTTTTAAAAATAATTGTTCTACAAAGTAGATTGAGTAAAGTC  700

seq1  AGCCTAATGACTTGACTAAAATAAGCGAAACTCTGACATACAGAGAAGGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAATGACTTGACTAAAATAAGCGAAACTCTGACATACAGAGAAGGC  750

seq1  AGTGGAATTC  759
      ||||||||||
seq2  AGTGGAATTC  760

seq1: chr2_75704849_75706016
seq2: B6Ng01-222P05.g_68_1214

seq1  GAATTCAGCACCGTGGGAGGATGGATATCTACTCGAGCGTCAGGCATGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCACCGTGGGAGGATGGATATCTACTCGAGCGTCAGGCATGAA  50

seq1  GAAAAATATCTATGGCAATATTGAGGACCTGGTAAATTTATTTCTAGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATATCTATGGCAATATTGAGGACCTGGTAAATTTATTTCTAGTTA  100

seq1  CTGTCTAACTTAAAATACACAAATACCTAGTTTACAAGTTTATCAAGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTAACTTAAAATACACAAATACCTAGTTTACAAGTTTATCAAGAGT  150

seq1  TTAGTCTTTTTTGGTGATATTCTTGCTGTAGGAGATTTTATATTTGCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCTTTTTTGGTGATATTCTTGCTGTAGGAGATTTTATATTTGCCTT  200

seq1  TTCTGAAGGAATTCTTTTTTCTCTGTACAGTTGAAGAACCTCACTGAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAGGAATTCTTTTTTCTCTGTACAGTTGAAGAACCTCACTGAAAT  250

seq1  GGTTCTGTTGAGTAGTTATATAAGCTGTCATGTTAAACATGTGCCAGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTGTTGAGTAGTTATATAAGCTGTCATGTTAAACATGTGCCAGTCT  300

seq1  TCTGGGAGCACGACAGTGTTGTGACTCTGGGCCCCTTATTAGATATTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGAGCACGACAGTGTTGTGACTCTGGGCCCCTTATTAGATATTTGG  350

seq1  TGACATTTATTGCATTTGAGCTTTTCTGGGGATTAGGTGCATGACCTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATTTATTGCATTTGAGCTTTTCTGGGGATTAGGTGCATGACCTTGG  400

seq1  CAAATTGGTTTACCTTTCCCAGCTTCACTTTGCTTTTCTGTAAAATCAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTGGTTTACCTTTCCCAGCTTCACTTTGCTTTTCTGTAAAATCAAT  450

seq1  AATTTATATTAGAACTATTATTTGAGTAAAGGACATTAAAAGAAAATTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATATTAGAACTATTATTTGAGTAAAGGACATTAAAAGAAAATTTC  500

seq1  ACCAATCTGATGTATAGTAGGTTCTTCATGATTTTTTTGTTAATATTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATCTGATGTATAGTAGGTTCTTCATGATTTTTTTGTTAATATTCAG  550

seq1  TATTTCGATAATATTTATTTAACTTGATATTTTCCTGCATGATCTTGCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCGATAATATTTATTTAACTTGATATTTTCCTGCATGATCTTGCTA  600

seq1  CTTAGCCTAGGCTGGCCTCAAACTTGCAATTTTCCTATTTCCATTTCATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCCTAGGCTGGCCTCAAACTTGCAATTTTCCTATTTCCATTTCATT  650

seq1  TGCTGGGGTTACAGGCAGGCAATGCTGGTAGTTGATTGTACTTTAGAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGGTTACAGGCAGGCAATGCTGGTAGTTGATTGTACTTTAGAAGA  700

seq1  ACCTATGAGGCTGTTTAATTGAAGTAATATTCCTAACATTGTTCTTGGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATGAGGCTGTTTAATTGAAGTAATATTCCTAACATTGTTCTTGGTT  750

seq1  TGCTTTTCAAGCCTAAGTTCTCAGGGTTTTTATTAATACTTCCGTTGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTCAAGCCTAAGTTCTCAGGGTTTTTATTAATACTTCCGTTGAGA  800

seq1  GGAATATCAGATAAATTTCACGAGAGACAGTAGCTCTTACCAGTATCCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATATCAGATAAATTTCACGAGAGACAGTAGCTCTTACCAGTATCCAG  850

seq1  TATTTTACATGAACTCTTTCAAAATGCTTCGTATTCTGTTTAAGAAATGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTACATGAACTCTTTCAAAATGCTTCGTATTCTGTTTAAGAAATGA  900

seq1  AAAACTACAGTTTTCTTTTTTGTATTAAATCTAAACCCAGTTGTAGAGAA  950
      ||||||||||||||| |||||||||||||||||||||||||||||||| |
seq2  AAAACTACAGTTTTC-TTTTTGTATTAAATCTAAACCCAGTTGTAGAG-A  948

seq1  AACTAATTTTGGGTTGTAGATTATTAAGAGCTTAATAAGTCAAACAAGTA  1000
      ||||||||||||| ||||||||||  ||||||||   |||||||| ||||
seq2  AACTAATTTTGGG-TGTAGATTAT--AGAGCTTA--TAGTCAAAC-AGTA  992

seq1  CTTGATAGACCACTGCAGTGTGTAGTTTACTTTTTTTTCCCTAAAGATTT  1050
      |||||||||||||||||||||||||  ||| ||||||||||| |||||||
seq2  CTTGATAGACCACTGCAGTGTGTAG--TAC-TTTTTTTCCCT-AAGATTT  1038

seq1  TTTAAGGGACAATGATTGTGCAT-ACAACTAACATGCTTACTGCATGAGT  1099
      |||||||||| |||| ||||||| ||| ||||||||| ||||||||||| 
seq2  TTTAAGGGAC-ATGA-TGTGCATAACACCTAACATGC-TACTGCATGAG-  1084

seq1  TATTA-TGTAG-CATATTATGTTTTTAAATTTCTTTGTAACTTAAGTGTC  1147
      ||||| ||||| ||  ||||| ||| || || |||||| ||||||  |||
seq2  TATTATTGTAGACAATTTATG-TTTGAACTTCCTTTGT-ACTTAA--GTC  1130

seq1  CTTTGAAGCTCATAAGTTGCA  1168
      |||    |  | |||||||||
seq2  CTT----GAGCCTAAGTTGCA  1147