BAC Information

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BAC

Clone NameB6Ng01-223F08
Chromosome2 (Build37)
Map Location 39,667,433 - 39,668,538
singlet/doubletsinglet
Overlap genenone
Upstream geneNr6a1, Olfml2a, LOC624652, LOC100041071, 1700123D08Rik, Rpl35, Arpc5l, Golga1, A930041I02Rik, LOC100042584, Ppp6c, Vmn2r-ps2, Ppia-ps2_560.1
Downstream geneLOC100042604, Magmas-ps, LOC666531, Lrp1b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223F08.bB6Ng01-223F08.g
ACCGA038105GA038106
length1,100540
definitionB6Ng01-223F08.b B6Ng01-223F08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaaaaattaggtaaagtatgaagggagaaagaagaatgaggctg
caggagaaatacataagtatcagataacctcaagaacacagatatctgta
gctatttttctgtttcttgatttttgggattcctaagacaaatgggtaaa
aaaaattgtagaatattgaaaagtaaaataatacccatcttttttcagaa
acaaaatttagttaattataaatttaagtctgataaagtttgctatattt
ccattgtaagtcaatggaaaagaaagaatgtatgaaggtatggcactatt
gcaatccaattttgaaacataatctagtggaacttctttttttaattaat
taatttttttaattaggtattttcttcatttacatttcaaatgatatccc
aaaagtcccccagaccctcccctcccccattcccctacctacccactccc
acttcttggccctggctttcccctgtactggggcatataaagtttgcaag
accaaggggcctctcttcacaatgatggctgactaggccatcttctgata
catatgcagctagagacacaagctccagggctattggttagttcatattg
ttgttctaccttatgaataaataaaattattgaaatgagtaaaattctga
ctttgtgacttgatttaactgagagaatgtggttgaattacattgtcctg
gtccaaatatatatttcaaaaattcataagaacaatctgtaagttcttag
aaatctactttatgatacaaaaaagtctaacctaaaatgcttagagaaaa
cataaggcaggaaaacgtaaagtcataacaactgtttgttccagctatca
tagaacagctagctgcccaaagggcactttgtgagtcacaaacacatgac
cacatcccataagacacttgagtatttcagtagaataatattatgtagat
atctcttaggcccatctaatttatattatttcactctatagtctttctta
ttttcatctgaataacctgtctattgatgagtgtggatatgggaaatcat
cctcttataatcatgagtagggtgtatgttatctagattgaacgtacttc


aattactttaggacagttggaggcctggaattggacagagaaagggagtc
agagctaagagttgtagatacagggagtgtcttgaggtagtggagaaaaa
gtaagatggcagtggacaagaatcagtgtggctatgactagccataggtt
tttatgatatcataaaggttagaacatggggataatttgtctaatctagg
tgggtagcttttatcattatcaattggttctgaaattattgtattggcat
cttgtgtattgagaatttattaatatataaatctgattggttaactgggt
cttaatttgactgggttactggatgttgtattatcaaactgccaggatga
tggatgtatttggttattggaatgtgggacagagccagcgagaccccacc
ggaacatagtgctaatgctacggagagaacatggcctattagggggagtg
gaggttgagagaagcagtagtgtagagagttggtgggttctttttttttt
tgtcgagtattgaaagatagaacggtggtgacctgctata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_39667433_39668538
seq2: B6Ng01-223F08.b_44_1143 (reverse)

seq1  GAAGTACGTTTAAATCTAGATAACATACCAACCCTAACCTCATGATTAAT  50
      |||||||| || ||||||||||||||||  ||||||  ||||||||||  
seq2  GAAGTACG-TTCAATCTAGATAACATAC--ACCCTA--CTCATGATTATA  45

seq1  AGAGGATGATTT-CCATATTCCACACTCATCAATAGACAGGTTATTCAGA  99
      |||||||||||| ||||| |||||||||||||||||||||||||||||||
seq2  AGAGGATGATTTCCCATA-TCCACACTCATCAATAGACAGGTTATTCAGA  94

seq1  TGAAAAATAAGAAAGACTATAGAGTGAAATAATATAAATTAGATGGGCCT  149
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TG-AAAATAAGAAAGACTATAGAGTGAAATAATATAAATTAGATGGGCCT  143

seq1  AAGAGATATCTACATAATATTATTCTACTGAAATACTCAAGTGTCTTATG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGATATCTACATAATATTATTCTACTGAAATACTCAAGTGTCTTATG  193

seq1  GGATGTGGTCATGTGTTTGTGACTCACAAAGTGCCCTTTGGGCAGCTAGC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTGGTCATGTGTTTGTGACTCACAAAGTGCCCTTTGGGCAGCTAGC  243

seq1  TGTTCTATGATAGCTGGAACAAACAGTTGTTATGACTTTACGTTTTCCTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTATGATAGCTGGAACAAACAGTTGTTATGACTTTACGTTTTCCTG  293

seq1  CCTTATGTTTTCTCTAAGCATTTTAGGTTAGACTTTTTTGTATCATAAAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATGTTTTCTCTAAGCATTTTAGGTTAGACTTTTTTGTATCATAAAG  343

seq1  TAGATTTCTAAGAACTTACAGATTGTTCTTATGAATTTTTGAAATATATA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTCTAAGAACTTACAGATTGTTCTTATGAATTTTTGAAATATATA  393

seq1  TTTGGACCAGGACAATGTAATTCAACCACATTCTCTCAGTTAAATCAAGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGACCAGGACAATGTAATTCAACCACATTCTCTCAGTTAAATCAAGT  443

seq1  CACAAAGTCAGAATTTTACTCATTTCAATAATTTTATTTATTCATAAGGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAGTCAGAATTTTACTCATTTCAATAATTTTATTTATTCATAAGGT  493

seq1  AGAACAACAATATGAACTAACCAATAGCCCTGGAGCTTGTGTCTCTAGCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAACAATATGAACTAACCAATAGCCCTGGAGCTTGTGTCTCTAGCT  543

seq1  GCATATGTATCAGAAGATGGCCTAGTCAGCCATCATTGTGAAGAGAGGCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATGTATCAGAAGATGGCCTAGTCAGCCATCATTGTGAAGAGAGGCC  593

seq1  CCTTGGTCTTGCAAACTTTATATGCCCCAGTACAGGGGAAAGCCAGGGCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGTCTTGCAAACTTTATATGCCCCAGTACAGGGGAAAGCCAGGGCC  643

seq1  AAGAAGTGGGAGTGGGTAGGTAGGGGAATGGGGGAGGGGAGGGTCTGGGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGTGGGAGTGGGTAGGTAGGGGAATGGGGGAGGGGAGGGTCTGGGG  693

seq1  GACTTTTGGGATATCATTTGAAATGTAAATGAAGAAAATACCTAATTAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTTGGGATATCATTTGAAATGTAAATGAAGAAAATACCTAATTAAA  743

seq1  AAAATTAATTAATTAAAAAAAGAAGTTCCACTAGATTATGTTTCAAAATT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAATTAATTAAAAAAAGAAGTTCCACTAGATTATGTTTCAAAATT  793

seq1  GGATTGCAATAGTGCCATACCTTCATACATTCTTTCTTTTCCATTGACTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGCAATAGTGCCATACCTTCATACATTCTTTCTTTTCCATTGACTT  843

seq1  ACAATGGAAATATAGCAAACTTTATCAGACTTAAATTTATAATTAACTAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGGAAATATAGCAAACTTTATCAGACTTAAATTTATAATTAACTAA  893

seq1  ATTTTGTTTCTGAAAAAAGATGGGTATTATTTTACTTTTCAATATTCTAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTTTCTGAAAAAAGATGGGTATTATTTTACTTTTCAATATTCTAC  943

seq1  AATTTTTTTTACCCATTTGTCTTAGGAATCCCAAAAATCAAGAAACAGAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTTTTACCCATTTGTCTTAGGAATCCCAAAAATCAAGAAACAGAA  993

seq1  AAATAGCTACAGATATCTGTGTTCTTGAGGTTATCTGATACTTATGTATT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGCTACAGATATCTGTGTTCTTGAGGTTATCTGATACTTATGTATT  1043

seq1  TCTCCTGCAGCCTCATTCTTCTTTCTCCCTTCATACTTTACCTAATTTTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTGCAGCCTCATTCTTCTTTCTCCCTTCATACTTTACCTAATTTTT  1093

seq1  AGAATTC  1106
      |||||||
seq2  AGAATTC  1100


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