BAC Information

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BAC

Clone NameB6Ng01-223M21
Chromosome2 (Build37)
Map Location 69,791,374 - 69,892,641
singlet/doubletdoublet
Overlap geneMyo3b
Upstream geneLass6, Nostrin, Spc25, G6pc2, Abcb11, Dhrs9, Lrp2, Bbs5, Kbtbd10, Fastkd1, Ppig, 4930578N16Rik, Phospho2, LOC433432, Klhl23, Ssb, Mettl5, 4930550G17Rik, Zfp650
Downstream geneLOC100040021, Sp5, 4933404M02Rik, LOC100040068, Gad1, LOC100039766, Gorasp2, Tlk1, Mettl8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223M21.bB6Ng01-223M21.g
ACCGA038445GA038446
length1,1391,107
definitionB6Ng01-223M21.b B6Ng01-223M21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,791,374 - 69,792,500)(69,891,529 - 69,892,641)
sequence
gaattcactctccacagttattattaatatcttttactagtctttgagtc
tttctttttgtgtggctcatggcttgtggaagtagaagaagatacagaaa
aatctaaaagcaagactaatacaaagcaaagctgaatgtgagagataaaa
ctttgcttgtgtcttttaaaggtctgtgcttctagacttgacccagacta
ctttatatcatctgtctttgaaaggtaagtgtatgcttattaagacagac
aggtaggaagtatatggaatttaactcagttttgctttattttctaaaaa
tgtatttgcgctatcccctcttgtagatttaaggtggtggacttactgac
catggcttcacagcaccacaacatggtgctcgatgtggagcacgagcggt
cgatgctagagggtgctctcacgttcctcgtgattcttttgagtcttcgt
ttacacctaggtaatctactaataaatactgtcattagtactgtttcttt
ctcttccccccagccccctgctagtaccttgtttattgaaaaagaaaaag
gatgtggatatatttgagtgtacttttgttgttgttgttttcgagacagg
gtttctctgtgtagccctggctgtcctggaactcactctgtagaccaggc
tggccttgaactcagaaatcctcctgcctctgcctcccgagtgctgggat
ttaaggcatgcgccaccactgcccggtgtttgaatgtatttttaaaatct
tgacacgtacaactaatagttttaggtttagaatagtcttcagaaaatcc
tttgcttacaggagctacagtataaaggcagagactctgctgtcaattcg
cgggttttcactcttaagacacttcacattttgtagaacatcttaataaa
acatgtggtgatttctttataatgtctctctccaggttaattgtgttttt
ataattttagggatgtctgacgatgacattctcagggcagagatggtggc
ccagctggtgtatgaacgacaggaacacatagctctttggcttgacctca
atattcctttcaaaggtgtcattttggtggcttgtggtaattacggtttg
taggatgaaaatattcctcaaattgaaagataatttttt
gaattcagggttccaagaaggctggaaattataaagaggccatcagcttt
gctggtaaggtctgactggggctttcacatttgcaatggaagcagaaagc
agccttgtagataaacagaaaacacacattcactcacatcttgccaaaga
caaaaagggacaaacatgatgctggagagtgggtcatgtgaccaactgaa
attagaaaacgtcagagtcatttttcagcaaaggctagcaaaacagatca
gggcaccaaagcctaaggtgccatatcacttctccctcattgatgaaata
tttatacctatttgtcaccaagcatggccttcccctgtcagaagctttaa
tgagtgaggcctatacgaatgcattcctgtttggatgcatgcacgtattt
atgcgcacaaatcatcttaacaccacaagcatcagagaactcttctgacc
ccttctgattgaatccaactggcataaaaacaagtaattggagtattaag
aatcaattaacagtgagctggctgattgccattacacctttaattagcag
tattggcttcagtcgcatggggccttggtttgcagctgggagtgaacgga
ttgtgcagccaccagctgacatttcgagaaccctgatacatcatcgcttt
tccagatgctaattaagattcgtatcttccaccgtattaatactgcaaag
gcctttgtgatggagacgggggtttttccactgcctttgctcctgtttat
tttattccccatctaggtgaggttgtaaacaccatcagggagtcaactgg
taggggatcagccatgcattccttccacaatttcacattaaaggaccact
tcagtgtgcaggtcattgggccaagtggcaggaccaggagatgaggagag
gaacgctgaacaatagggcacttactctaaagtttagagatgggggaaag
gggaagcgggcacatcaccgtgctatgctggcctgggaatgacagtggga
tagaaatgtcaccagagcacagatggaggtgctcttgctgacctctttat
gttactgtcacaatcgtcagcgggccctgagaaccacaacagtttggaaa
ggccttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_69791374_69792500
seq2: B6Ng01-223M21.b_47_1185

seq1  GAATTCACTCTCCACAGTTATTATTAATATCTTTTACTAGTCTTTGAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTCCACAGTTATTATTAATATCTTTTACTAGTCTTTGAGTC  50

seq1  TTTCTTTTTGTGTGGCTCATGGCTTGTGGAAGTAGAAGAAGATACAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTGTGTGGCTCATGGCTTGTGGAAGTAGAAGAAGATACAGAAA  100

seq1  AATCTAAAAGCAAGACTAATACAAAGCAAAGCTGAATGTGAGAGATAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAAAAGCAAGACTAATACAAAGCAAAGCTGAATGTGAGAGATAAAA  150

seq1  CTTTGCTTGTGTCTTTTAAAGGTCTGTGCTTCTAGACTTGACCCAGACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCTTGTGTCTTTTAAAGGTCTGTGCTTCTAGACTTGACCCAGACTA  200

seq1  CTTTATATCATCTGTCTTTGAAAGGTAAGTGTATGCTTATTAAGACAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATATCATCTGTCTTTGAAAGGTAAGTGTATGCTTATTAAGACAGAC  250

seq1  AGGTAGGAAGTATATGGAATTTAACTCAGTTTTGCTTTATTTTCTAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGGAAGTATATGGAATTTAACTCAGTTTTGCTTTATTTTCTAAAAA  300

seq1  TGTATTTGCGCTATCCCCTCTTGTAGATTTAAGGTGGTGGACTTACTGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTGCGCTATCCCCTCTTGTAGATTTAAGGTGGTGGACTTACTGAC  350

seq1  CATGGCTTCACAGCACCACAACATGGTGCTCGATGTGGAGCACGAGCGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCTTCACAGCACCACAACATGGTGCTCGATGTGGAGCACGAGCGGT  400

seq1  CGATGCTAGAGGGTGCTCTCACGTTCCTCGTGATTCTTTTGAGTCTTCGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGCTAGAGGGTGCTCTCACGTTCCTCGTGATTCTTTTGAGTCTTCGT  450

seq1  TTACACCTAGGTAATCTACTAATAAATACTGTCATTAGTACTGTTTCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACCTAGGTAATCTACTAATAAATACTGTCATTAGTACTGTTTCTTT  500

seq1  CTCTTCCCCCCAGCCCCCTGCTAGTACCTTGTTTATTGAAAAAGAAAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCCCCCAGCCCCCTGCTAGTACCTTGTTTATTGAAAAAGAAAAAG  550

seq1  GATGTGGATATATTTGAGTGTACTTTTGTTGTTGTTGTTTTCGAGACAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGGATATATTTGAGTGTACTTTTGTTGTTGTTGTTTTCGAGACAGG  600

seq1  GTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGC  650

seq1  TGGCCTTGAACTCAGAAATCCTCCTGCCTCTGCCTCCCGAGTGCTGGGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTTGAACTCAGAAATCCTCCTGCCTCTGCCTCCCGAGTGCTGGGAT  700

seq1  TTAAGGCATGCGCCACCACTGCCCGGTGTTTGAATGTATTTTTAAAATCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGCATGCGCCACCACTGCCCGGTGTTTGAATGTATTTTTAAAATCT  750

seq1  TGACACGTACAACTAATAGTTTTAGGTTTAGAATAGTCTTCAGAAAATCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACGTACAACTAATAGTTTTAGGTTTAGAATAGTCTTCAGAAAATCC  800

seq1  TTTGCTTACAGGAGCTACAGTATAAAGGCAGAGACTCTGCTGTCAATTCG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTACAGGAGCTACAGTATAAAGGCAGAGACTCTGCTGTCAATTCG  850

seq1  C-GGTTTTCACTCTTAAGACACTTCACATTTTGTAGAACATCTTAATAAA  899
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGTTTTCACTCTTAAGACACTTCACATTTTGTAGAACATCTTAATAAA  900

seq1  ACATGTGGTGATTTCTTTATAATGTCTCTCTCCAGGTTAATTGTGTTTTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGGTGATTTCTTTATAATGTCTCTCTCCAGGTTAATTGTGTTTTT  950

seq1  ATAATTTTAGGGATGTCTGACGATGACATTCTCAGGGCAGAGATGGTGGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTTAGGGATGTCTGACGATGACATTCTCAGGGCAGAGATGGTGGC  1000

seq1  CCAGCT-GTGTATGAACGACAGG-ACACATAGCTCTTT-GCTTGACCTC-  1045
      |||||| |||||||||||||||| |||||||||||||| |||||||||| 
seq2  CCAGCTGGTGTATGAACGACAGGAACACATAGCTCTTTGGCTTGACCTCA  1050

seq1  ATA-TCCTTTCAAA-GTGTCATTTTG--TGCTTGTGTTAATTAC-GTTTG  1090
      ||| |||||||||| |||||||||||   ||||||| ||||||| |||||
seq2  ATATTCCTTTCAAAGGTGTCATTTTGGTGGCTTGTGGTAATTACGGTTTG  1100

seq1  TAGATTAAAAATAT--CTCAATTTAAAAGATATTTTTTT  1127
      |||  | |||||||  ||||| || ||||||| ||||||
seq2  TAGGATGAAAATATTCCTCAAATTGAAAGATAATTTTTT  1139

seq1: chr2_69891529_69892641
seq2: B6Ng01-223M21.g_67_1173 (reverse)

seq1  AAAGGCCCCTTTCC-AACTG-TGTGG-TCTCAGGGCCCGCTGAACGATTG  47
      |||||  ||||||| ||||| ||||| ||||||||||||||| |||||||
seq2  AAAGG--CCTTTCCAAACTGTTGTGGTTCTCAGGGCCCGCTG-ACGATTG  47

seq1  TGACAGTAAACATAAAGAGGTCAGCAAGAGCCACTCCATCTTGTGCTCTG  97
      ||||||| |||||||||||||||||||||||  ||||||| |||||||||
seq2  TGACAGT-AACATAAAGAGGTCAGCAAGAGCACCTCCATC-TGTGCTCTG  95

seq1  GTTGACATTTCTATCCCACTGTCATTCCCAGGCCAGCATAGCACGGTGAT  147
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  G-TGACATTTCTATCCCACTGTCATTCCCAGGCCAGCATAGCACGGTGAT  144

seq1  GTGCCCGCTTCCCCCTTTCCCCCATCTTCTTAACTTTAGAGTAAGTGCCC  197
      |||||||||| ||||||||||||||| ||| |||||||||||||||||||
seq2  GTGCCCGCTT-CCCCTTTCCCCCATC-TCTAAACTTTAGAGTAAGTGCCC  192

seq1  TATTGTTTCAGCGTTCCTCTCCTCATCTCCTGGTCCTGCCACTTGGCCCA  247
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTG-TTCAGCGTTCCTCTCCTCATCTCCTGGTCCTGCCACTTGGCCCA  241

seq1  ATGACCTGCACACTGAAGTGGTCCTTTAATGTGAAATTGTGGAAGGAATG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCTGCACACTGAAGTGGTCCTTTAATGTGAAATTGTGGAAGGAATG  291

seq1  CATGGCTGATCCCCTACCAGTTGACTCCCTGATGGTGTTTACAACCTCAC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCTGATCCCCTACCAGTTGACTCCCTGATGGTGTTTACAACCTCAC  341

seq1  CTAGATGGGGAATAAAATAAACAGGAGCAAAGGCAGTGGAAAAACCCCCG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATGGGGAATAAAATAAACAGGAGCAAAGGCAGTGGAAAAACCCCCG  391

seq1  TCTCCATCACAAAGGCCTTTGCAGTATTAATACGGTGGAAGATACGAATC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATCACAAAGGCCTTTGCAGTATTAATACGGTGGAAGATACGAATC  441

seq1  TTAATTAGCATCTGGAAAAGCGATGATGTATCAGGGTTCTCGAAATGTCA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTAGCATCTGGAAAAGCGATGATGTATCAGGGTTCTCGAAATGTCA  491

seq1  GCTGGTGGCTGCACAATCCGTTCACTCCCAGCTGCAAACCAAGGCCCCAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTGGCTGCACAATCCGTTCACTCCCAGCTGCAAACCAAGGCCCCAT  541

seq1  GCGACTGAAGCCAATACTGCTAATTAAAGGTGTAATGGCAATCAGCCAGC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGACTGAAGCCAATACTGCTAATTAAAGGTGTAATGGCAATCAGCCAGC  591

seq1  TCACTGTTAATTGATTCTTAATACTCCAATTACTTGTTTTTATGCCAGTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGTTAATTGATTCTTAATACTCCAATTACTTGTTTTTATGCCAGTT  641

seq1  GGATTCAATCAGAAGGGGTCAGAAGAGTTCTCTGATGCTTGTGGTGTTAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCAATCAGAAGGGGTCAGAAGAGTTCTCTGATGCTTGTGGTGTTAA  691

seq1  GATGATTTGTGCGCATAAATACGTGCATGCATCCAAACAGGAATGCATTC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATTTGTGCGCATAAATACGTGCATGCATCCAAACAGGAATGCATTC  741

seq1  GTATAGGCCTCACTCATTAAAGCTTCTGACAGGGGAAGGCCATGCTTGGT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGGCCTCACTCATTAAAGCTTCTGACAGGGGAAGGCCATGCTTGGT  791

seq1  GACAAATAGGTATAAATATTTCATCAATGAGGGAGAAGTGATATGGCACC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAATAGGTATAAATATTTCATCAATGAGGGAGAAGTGATATGGCACC  841

seq1  TTAGGCTTTGGTGCCCTGATCTGTTTTGCTAGCCTTTGCTGAAAAATGAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCTTTGGTGCCCTGATCTGTTTTGCTAGCCTTTGCTGAAAAATGAC  891

seq1  TCTGACGTTTTCTAATTTCAGTTGGTCACATGACCCACTCTCCAGCATCA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACGTTTTCTAATTTCAGTTGGTCACATGACCCACTCTCCAGCATCA  941

seq1  TGTTTGTCCCTTTTTGTCTTTGGCAAGATGTGAGTGAATGTGTGTTTTCT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTCCCTTTTTGTCTTTGGCAAGATGTGAGTGAATGTGTGTTTTCT  991

seq1  GTTTATCTACAAGGCTGCTTTCTGCTTCCATTGCAAATGTGAAAGCCCCA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATCTACAAGGCTGCTTTCTGCTTCCATTGCAAATGTGAAAGCCCCA  1041

seq1  GTCAGACCTTACCAGCAAAGCTGATGGCCTCTTTATAATTTCCAGCCTTC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGACCTTACCAGCAAAGCTGATGGCCTCTTTATAATTTCCAGCCTTC  1091

seq1  TTGGAACCCTGAATTC  1113
      ||||||||||||||||
seq2  TTGGAACCCTGAATTC  1107