BAC Information

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BAC

Clone NameB6Ng01-224O08
Chromosome2 (Build37)
Map Location 129,398,605 - 129,399,750
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043730, Gm355, Anapc1, Mertk, Tmem87b, 1600015H20Rik, Zc3h8, LOC100043735, LOC100043736, Zc3h6, LOC668894, Ttl, LOC100043738, Rpo1-2, Chchd5, LOC545461, LOC100043431, Slc20a1, A730036I17Rik, LOC671466, Ckap2l, Il1a, Il1b, OTTMUSG00000015529, LOC668896, F830045P16Rik
Downstream geneSirpa, Pdyn, Ppia-ps2_1620.1, Stk35, Tgm3, AU015228, LOC100043438, Tgm6, Snrpb, Tmc2, Nol5a, Idh3b, Ebf4, LOC668899, Cpxm1, LOC100043446, 1700020A23Rik, 4933425O20Rik, A930025D01Rik, Vps16, Ptpra, Mrps26
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-224O08.bB6Ng01-224O08.g
ACCGA039229GA039230
length6561,144
definitionB6Ng01-224O08.b B6Ng01-224O08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagactctttctgcagacaactgaattaacggctagtgctttat
tgttttatggtagtgcttaattagttactgaataggttaaactccttgct
gctaactggaatctaagaacactgggaaaaggctttagctatgttagaat
acaatcttaaaagacatttactataaggtaatgcttaatagagtgcacgt
gaatctatacattagactaacgtggtggaaatttgattattatgggttag
ggaaaaaatgccataactccgggagggaaatttccatgtaactctttttt
ttttttttttttttttattttgttttcttttttttttttctttccatttt
ttattaggtatttagctcatttacatttccaatgctataccaaaagtccc
ccatacccacccacccccactcccctacccgcccactccccctttttggc
cctggcgttcccctgttctggggcatataaagtttgtgtgtccaatgggc
ctctctttccagtgatggccgactaggccatcttttgatacatatgcagc
tagagtcaagagctccggggtactggttagttcataatgttgatccacct
atagggttgcagatccctttagctccttgggtacttttctctagctcctc
cattgg
gaattcaactctcaagtgacagcacttagggagttctccaggagaaattt
taagagggcaagggtagaaatggccagcctgggcttagcttgggtttatg
catcaggtaaatgcagagctagggtttaggacccagatgggagcgtgaaa
gggggagaaattggcaaagagaggattttcaaagcaagacatatgttcca
gaagagacggcaacaagaaaaaaaaaaagtaagggagccagagaagcaga
gtcagtgggcagaggtgccctgggccaagaggaggggtctgtggggtaat
tagggcaagctttcagtgaaggtggatgcccacagctcctctctaatccc
tgtggtggcttctccagggtctaagcttctttttttctggaggaggaaac
tgaagaggcaccagattagctttgaaccttgcaggctgctccagagagtg
tcacctttaatcactaggctgcttttcagggaaaaggctcaagggctcag
accacattcaaagtttgtctccatcactttctacctgtgtaatcccaagt
accagcgtgcctcagtttgcttacctgcaaaatggtgctccaagtggctt
ctcaggggctcgcccaagaggtgctccaaggggcttctcagaggctcgcc
caagggggcccaaggaacacgcatagagcagaatctagtgttggagagcc
aggaagcacctagaacgggatactgaatgttctcaaatgggggaggggct
gttagcaccttttgccctggactgactgggacaagggggaggagaggcca
ccagtggattctgctaagccgaatatttccatgggacagacccagtgatc
aactcttgtctacatctgctgctgtaagccaccaaacttctctaggaatt
ctctatcctgagactcacaggagttcactcctaagttgtctttggcaaca
gaatgctgccacaacgcacggagcgtctcatgaatgctggacatctgccg
tgactttcccatgtggcatgggtgcggggtcatacttatgattactctgc
actcactcaaggacaccatcttgtattgggctcattttttctggtccaac
ctacgtgaagcgattgaaacgcaaccttgatgtaatgagtgccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_129398605_129399750
seq2: B6Ng01-224O08.g_71_1214 (reverse)

seq1  GGGCACTCATTACCACCCAAGTTTTGCTGTCCATCTGCCTCACGTAGTTG  50
      |||||||||||||    |||| ||   | || ||| || |||||||| | 
seq2  GGGCACTCATTAC--ATCAAGGTTGCGTTTCAATC-GCTTCACGTAGGTT  47

seq1  TGACACGGAAAAATGAGCCC-ATACAAGAT-GTGTCCTTGGAGTGGGTGC  98
       |||  | |||||||||||| ||||||||| |||||||| ||||| ||||
seq2  GGACCAGAAAAAATGAGCCCAATACAAGATGGTGTCCTT-GAGTGAGTGC  96

seq1  AGAGTATCCATAGGTATGGCCCCGGCACCCATGCCACATGGGAAGGCCAC  148
      ||||||  |||| ||||| |||| |||||||||||||||||||| | |||
seq2  AGAGTAATCATAAGTATGACCCC-GCACCCATGCCACATGGGAAAGTCAC  145

seq1  CGGGCAGATGTCCAGCATTCATGAGAACGCTCCGTGCGTTGTGGCAGCA-  197
        ||||||||||||||||||||||| ||||||||||||||||||||||| 
seq2  --GGCAGATGTCCAGCATTCATGAG-ACGCTCCGTGCGTTGTGGCAGCAT  192

seq1  TCTG-TGCCAAAGAC-ACTTAGGAGTGAACTCCTGTGAGTCTCAGGATAG  245
      |||| |||||||||| ||||||||||||||||||||||||||||||||||
seq2  TCTGTTGCCAAAGACAACTTAGGAGTGAACTCCTGTGAGTCTCAGGATAG  242

seq1  AGAATTCCTAGAGAAGTTTGGTGGCTTACAGCAGCAGATGTAGACAAGAG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTCCTAGAGAAGTTTGGTGGCTTACAGCAGCAGATGTAGACAAGAG  292

seq1  TTGATCACTGGGTCTGTCCCATGG-AATATTCGGCTTAGCAGAATCCACT  344
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TTGATCACTGGGTCTGTCCCATGGAAATATTCGGCTTAGCAGAATCCACT  342

seq1  GGTGGCCTCTCCTCCCCCTTGTCCCAGTCAGTCCAGGGCAAAAGGTGCTA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCCTCTCCTCCCCCTTGTCCCAGTCAGTCCAGGGCAAAAGGTGCTA  392

seq1  ACAGCCCCTCCCCCATTTGAGAACATTCAGTATCCCGTTCTAGGTGCTTC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCCCTCCCCCATTTGAGAACATTCAGTATCCCGTTCTAGGTGCTTC  442

seq1  CTGGCTCTCCAACACTAGATTCTGCTCTATGCGTGTTCCTTGGGCCCCCT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTCTCCAACACTAGATTCTGCTCTATGCGTGTTCCTTGGGCCCCCT  492

seq1  TGGGCGAGCCTCTGAGAAGCCCCTTGGAGCACCTCTTGGGCGAGCCCCTG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCGAGCCTCTGAGAAGCCCCTTGGAGCACCTCTTGGGCGAGCCCCTG  542

seq1  AGAAGCCACTTGGAGCACCATTTTGCAGGTAAGCAAACTGAGGCACGCTG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCACTTGGAGCACCATTTTGCAGGTAAGCAAACTGAGGCACGCTG  592

seq1  GTACTTGGGATTACACAGGTAGAAAGTGATGGAGACAAACTTTGAATGTG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTGGGATTACACAGGTAGAAAGTGATGGAGACAAACTTTGAATGTG  642

seq1  GTCTGAGCCCTTGAGCCTTTTCCCTGAAAAGCAGCCTAGTGATTAAAGGT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAGCCCTTGAGCCTTTTCCCTGAAAAGCAGCCTAGTGATTAAAGGT  692

seq1  GACACTCTCTGGAGCAGCCTGCAAGGTTCAAAGCTAATCTGGTGCCTCTT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTCTCTGGAGCAGCCTGCAAGGTTCAAAGCTAATCTGGTGCCTCTT  742

seq1  CAGTTTCCTCCTCCAGAAAAAAAGAAGCTTAGACCCTGGAGAAGCCACCA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTCCTCCTCCAGAAAAAAAGAAGCTTAGACCCTGGAGAAGCCACCA  792

seq1  CAGGGATTAGAGAGGAGCTGTGGGCATCCACCTTCACTGAAAGCTTGCCC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGATTAGAGAGGAGCTGTGGGCATCCACCTTCACTGAAAGCTTGCCC  842

seq1  TAATTACCCCACAGACCCCTCCTCTTGGCCCAGGGCACCTCTGCCCACTG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTACCCCACAGACCCCTCCTCTTGGCCCAGGGCACCTCTGCCCACTG  892

seq1  ACTCTGCTTCTCTGGCTCCCTTACTTTTTTTTTTTCTTGTTGCCGTCTCT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGCTTCTCTGGCTCCCTTACTTTTTTTTTTTCTTGTTGCCGTCTCT  942

seq1  TCTGGAACATATGTCTTGCTTTGAAAATCCTCTCTTTGCCAATTTCTCCC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAACATATGTCTTGCTTTGAAAATCCTCTCTTTGCCAATTTCTCCC  992

seq1  CCTTTCACGCTCCCATCTGGGTCCTAAACCCTAGCTCTGCATTTACCTGA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCACGCTCCCATCTGGGTCCTAAACCCTAGCTCTGCATTTACCTGA  1042

seq1  TGCATAAACCCAAGCTAAGCCCAGGCTGGCCATTTCTACCCTTGCCCTCT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAAACCCAAGCTAAGCCCAGGCTGGCCATTTCTACCCTTGCCCTCT  1092

seq1  TAAAATTTCTCCTGGAGAACTCCCTAAGTGCTGTCACTTGAGAGTTGAAT  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTTCTCCTGGAGAACTCCCTAAGTGCTGTCACTTGAGAGTTGAAT  1142

seq1  TC  1146
      ||
seq2  TC  1144