BAC Information

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BAC

Clone NameB6Ng01-225B02
Chromosome2 (Build37)
Map Location 16,375,602 - 16,376,735
singlet/doubletsinglet
Overlap genePlxdc2
Upstream geneLOC227588, LOC625457
Downstream gene4930515L03Rik, LOC383665, Nebl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-225B02.bB6Ng01-225B02.g
ACCGA039356GA039357
length1,1451,145
definitionB6Ng01-225B02.b B6Ng01-225B02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcctactagtgtataccaccaaattatgcagaatggctctttct
aaaatgataacagacatcatcatctacttccttgccaacatctgctctct
ctgaggaagaaaaagaacttactggtcccatgtgacttgccacttgctaa
atgcagcaaggtcttgagagctaagctccacctgagtataaaactgtgag
ctccatcacagcaaagtctccccagtggccaaggctataaatggagattt
tttaaatttttttttagatttatttattttatgtatatgagtacactgtg
gctgtcagacacaccagaagagggcattggatcccattacagatggttgt
gagccactacgtaattgctaaaaattgaactcaggacctctggaagagca
gtcagtgctgttcactggtgagctatctgtccagcccagtatggatgctc
tttaattcttttgctcatacccactttcttctacatttcgtgatggatat
tgattatctgcatgatgagagttaatatttgtaaaagcctaatcacactc
caacattcatttctatctcagtaagcaaagctgaagtcataaaatagcgt
tcagtgcccagaataaatccgccctggcttcttatcccagatttaaagac
cttcactaccgactatgagttaggctatagcaaccttgaacttctcattt
tccacgaatgtattttcagactcctcactactaaaagggatcagatgaaa
ctaactctgtgatggcctgttttccccaatcttagaagggacgaaagtgt
gcctgagaaagttgctggcttgctaattcaaatagaatttgacataaaag
tcaatgaggaagtgctcatatagactttattttcaaagatagggagataa
gtgtcatttaccaacatcataagcaaataaaaagaaaacaaaaaagatgc
agaccaaaggtacctctcactgaactcactcgacacctgtactcgacacc
tgtaaaggcaaggtctgtctttatgacccacagactgtcaccttaaagcc
cacttagcacaccaccgtgttgactttcttgccatgtaccagcagcttat
aaatttcaacttggtgtgtgtgcaaaagacttctggacctcagct

gaattctcagtttagttctataccaaattttttgattggattgtttggat
ttttgtgattaacttcttgagttctttatatattttgaatattagccctc
tatgaggtgtggggtcagtgaattttttttcccaatctgtagtttgccaa
tttgtcttattgactatgtcctttgccttacataagctttccagtttcat
gaggccgtatttgtcaattattgatcttagagcatgagccattggagttc
tgttaaggaaatttccccctgtgctaataagttcaaggctctttccaact
ttcttttctattagattcagagtatctggttttatgctgaggtttgatcc
acttggacttgagctttgtgcaaaaggacaaatatgggtctatttttgtc
tttctacattcagagagccagtcagaacagcacaatttattgaagatgct
ttctttctttttttttttctactgtatatttttggcttctttgtcaaaga
tcaagtgtgtgtgagtgtgtagttttgtttctgggtcttcaattctattc
cattgatcaacctgtctgtctttgtaccaataccatgcagcttttatcac
tattgctctgaagtacagcttgaggtcagggatgttgattccctcagtca
ttcctttactgttaagaatttttttccctattcagagctttttccctttc
ctgatgaatttgagaattgctttttttccatttctttgaagaactgtata
gggattttgatagaaattgcattgaatctgtagactgccttgggtaggat
aaccatttttactatgttaattctgtcaatccatgagcatgagagatctc
ttcatttctgtgatcttcttcaatttctttcttgagcaacttgaagttat
gtcatacagatcttgcacatttttgtttagagttaccccagatatttata
tgtttgtggctatgtgaggagttgtttccctatttctttctcagctattt
atcatttttctgagaggctactgattaattgagttattttatatctgttc
actttgctgagtcttatcagctgaaggtttctggtagttggattcgctat
gtatcttcaacagtccatggatccttatcgtctgccattgtatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_16375602_16376735
seq2: B6Ng01-225B02.b_46_1190 (reverse)

seq1  AGCTGAGGGCCAGGAAGTC-TCTGCACA-----CCAGT--GAATTTATAA  42
      |||||||| ||| |||||| | ||||||     | |||   |||||||||
seq2  AGCTGAGGTCCA-GAAGTCTTTTGCACACACACCAAGTTGAAATTTATAA  49

seq1  GCTGCTGGTACATGGCA--GAAGTC-ACACGGTGGTGTGCTAAGTGGGCT  89
      |||||||||||||||||   ||||| ||||||||||||||||||||||||
seq2  GCTGCTGGTACATGGCAAGAAAGTCAACACGGTGGTGTGCTAAGTGGGCT  99

seq1  TTAGGTGGACAGTCTGTGGGTCATAAAGACAGACC-TGCCTTTACAGGTG  138
      ||| |  |||||||||||||||||||||||||||| ||||||||||||||
seq2  TTAAGGTGACAGTCTGTGGGTCATAAAGACAGACCTTGCCTTTACAGGTG  149

seq1  TCGAGTACAGGTGTCGAGTGAGTTCAGTGAGAGGTACCTTTGGTCTGCAT  188
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAGTACAGGTGTCGAGTGAGTTCAGTGAGAGGTACCTTTGGTCTGCAT  199

seq1  CTTTTTTGTTTTCTTTTTATTTGCTTATGATGTTGGTAAATGACACTTAT  238
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTGTTTTCTTTTTATTTGCTTATGATGTTGGTAAATGACACTTAT  249

seq1  CTCCCTATCTTTGAAAATAAAGTCTATATGAGCACTTCCTCATTGACTTT  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTATCTTTGAAAATAAAGTCTATATGAGCACTTCCTCATTGACTTT  299

seq1  TATGTCAAATTCTATTTGAATTAGCAAGCCAGCAACTTTCTCAGGCACAC  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCAAATTCTATTTGAATTAGCAAGCCAGCAACTTTCTCAGGCACAC  349

seq1  TTTCGTCCCTTCTAAGATTGGGGAAAACAGGCCATCACAGAGTTAGTTTC  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGTCCCTTCTAAGATTGGGGAAAACAGGCCATCACAGAGTTAGTTTC  399

seq1  ATCTGATCCCTTTTAGTAGTGAGGAGTCTGAAAATACATTCGTGGAAAAT  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGATCCCTTTTAGTAGTGAGGAGTCTGAAAATACATTCGTGGAAAAT  449

seq1  GAGAAGTTCAAGGTTGCTATAGCCTAACTCATAGTCGGTAGTGAAGGTCT  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGTTCAAGGTTGCTATAGCCTAACTCATAGTCGGTAGTGAAGGTCT  499

seq1  TTAAATCTGGGATAAGAAGCCAGGGCGGATTTATTCTGGGCACTGAACGC  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATCTGGGATAAGAAGCCAGGGCGGATTTATTCTGGGCACTGAACGC  549

seq1  TATTTTATGACTTCAGCTTTGCTTACTGAGATAGAAATGAATGTTGGAGT  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATGACTTCAGCTTTGCTTACTGAGATAGAAATGAATGTTGGAGT  599

seq1  GTGATTAGGCTTTTACAAATATTAACTCTCATCATGCAGATAATCAATAT  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTAGGCTTTTACAAATATTAACTCTCATCATGCAGATAATCAATAT  649

seq1  CCATCACGAAATGTAGAAGAAAGTGGGTATGAGCAAAAGAATTAAAGAGC  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCACGAAATGTAGAAGAAAGTGGGTATGAGCAAAAGAATTAAAGAGC  699

seq1  ATCCATACTGGGCTGGACAGATAGCTCACCAGTGAACAGCACTGACTGCT  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATACTGGGCTGGACAGATAGCTCACCAGTGAACAGCACTGACTGCT  749

seq1  CTTCCAGAGGTCCTGAGTTCAATTTTTAGCAATTACGTAGTGGCTCACAA  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAGAGGTCCTGAGTTCAATTTTTAGCAATTACGTAGTGGCTCACAA  799

seq1  CCATCTGTAATGGGATCCAATGCCCTCTTCTGGTGTGTCTGACAGCCACA  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTGTAATGGGATCCAATGCCCTCTTCTGGTGTGTCTGACAGCCACA  849

seq1  GTGTACTCATATACATAAAATAAATAAATCTAAAAAAAAATTTAAAAAAT  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACTCATATACATAAAATAAATAAATCTAAAAAAAAATTTAAAAAAT  899

seq1  CTCCATTTATAGCCTTGGCCACTGGGGAGACTTTGCTGTGATGGAGCTCA  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTTATAGCCTTGGCCACTGGGGAGACTTTGCTGTGATGGAGCTCA  949

seq1  CAGTTTTATACTCAGGTGGAGCTTAGCTCTCAAGACCTTGCTGCATTTAG  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTATACTCAGGTGGAGCTTAGCTCTCAAGACCTTGCTGCATTTAG  999

seq1  CAAGTGGCAAGTCACATGGGACCAGTAAGTTCTTTTTCTTCCTCAGAGAG  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGGCAAGTCACATGGGACCAGTAAGTTCTTTTTCTTCCTCAGAGAG  1049

seq1  AGCAGATGTTGGCAAGGAAGTAGATGATGATGTCTGTTATCATTTTAGAA  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGATGTTGGCAAGGAAGTAGATGATGATGTCTGTTATCATTTTAGAA  1099

seq1  AGAGCCATTCTGCATAATTTGGTGGTATACACTAGTAGGAGAATTC  1134
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCATTCTGCATAATTTGGTGGTATACACTAGTAGGAGAATTC  1145


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