BAC Information

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BAC

Clone NameB6Ng01-226E05
Chromosome2 (Build37)
Map Location 93,641,360 - 93,642,505
singlet/doubletsinglet
Overlap geneExt2
Upstream geneSyt13, LOC100042784, Trp53i11, C230071H18Rik, Tspan18, LOC100042789, LOC639658, Cd82, Alx4
Downstream gene2610203E10Rik, Gm1967, Gm1335, LOC620695, Alkbh3, Hsd17b12, E530001K10Rik, Ttc17, Itpa-ps1, Api5, LOC100043259
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-226E05.bB6Ng01-226E05.g
ACCGA040248GA040249
length1,147738
definitionB6Ng01-226E05.b B6Ng01-226E05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
agttccacacggctgtgagaagcagctatcaatagcaacaagtctcattt
ttcccattgaaaaagctttaaaataaaaacaaaaccagcgtcgctctgct
ggacagcccccaggagatgtgggaaatccctgagaaacacctctcacaga
gggaggaccccagcatgctgccgccagggcccctccctgccttccccagg
gaagaggaccatgaagccaaagactgtcttcacttttagtctttggaggg
ataaagaggagtgtcctttataaaagcgcagctctgtggtagccagggag
gtgagcccttggctttctggggctaccatgaagacagtagagtctctcac
gggttactgaaccacagaattttaaaactaattgcaacctcaagtgatct
taaattccatatagtcataaataaaaatcaaaaagatcaaattactagga
aatacaatgacagtgaaaatctccaaaactgatcatcttaaagtggtctc
cggcatttcagtgcgtgcccactgctgggcttcagtgttttcatccttgg
gttgaatctggagtgatgatggagtcctgagccaacgggacaccagccag
atgaagacacagggccatcacagtgagctaaggaaaggacacgcagcaga
ctagtcctcacagtctcagggctgggcccagtgcttctcatgtttctcag
ccacagcctgaggatgtttggggccatttactctctgtggtggtgggatc
ctgtgcagaggggctagcatggcagacctgctgccatcgggtgaaagttc
tgttgggttggcttcttgactggtgtctgggaacttggactggagatggt
tcccatcacccacagaactggtaagagaggttcactgtgcccaaacatac
aacaagactgtatgtgccaggcaggccagcctatcccatgctacattgac
gtgccaaattgagatcctgggtacatgacaaaaacttgcttgctctacag
gaaacccagtggccaacacagaccacccatcagaatgtaccaggatcctg
cccttggaacaggtgctgaagtacagcagctttcctagcctctgaaggct
cttattgagaaactgttttgtggaagagttggggatttagtacatgc
gaattctttgggaatggctttgccctcagttctgtattgagatctctatg
tagagtgcacaggagtcgcctcttagttcatcgctgggctgtctgtagag
atccctagagacctagctttttataaggcctggggacttctgttagtgcc
caagggctctggctggtggctgcagtgaccccatctcagtcagtccatga
gaatcaaagctaaggtttatattatgtagcagatgtcctccgagaggtaa
gtgtttgggaaccagatggataaagctggagcgtgacagctccaaggtat
ggtcgggggaaggtttttaatcatagataagaaggggaatacagccagag
gtatgtggaggagtccagagcagagagggaaagtggtacactaagatgac
caacagactggatgggccatgggaggagaggaagaggggagggcaaggaa
taaagacagagtctgtgagccaagagaggaagccaaaaacaagagagggg
atcaagagagcacatagctgaaatgtcggggttataagaaaatgagaaga
tgggggaaggaaagctcatggattagagaagtttagggtaggggcgggtg
agaattgctgaggagaacggctgggagccgtgatactggaggctggaggg
cagcatgcacttttggtaagtctaaaagacccatagatagccattttgtc
ccgagtttcttttggacctaaacagtggggtaccccgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_93641360_93642505
seq2: B6Ng01-226E05.b_55_1201

seq1  AGTTCCACACGGCTGTGAGAAGCAGCTATCAATAGCAACAAGTCTCATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCACACGGCTGTGAGAAGCAGCTATCAATAGCAACAAGTCTCATTT  50

seq1  TTCCCATTGAAAAAGCTTTAAAATAAAAACAAAACCAGCGTCGCTCTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCATTGAAAAAGCTTTAAAATAAAAACAAAACCAGCGTCGCTCTGCT  100

seq1  GGACAGCCCCCAGGAGATGTGGGAAATCCCTGAGAAACACCTCTCACAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGCCCCCAGGAGATGTGGGAAATCCCTGAGAAACACCTCTCACAGA  150

seq1  GGGAGGACCCCAGCATGCTGCCGCCAGGGCCCCTCCCTGCCTTCCCCAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGACCCCAGCATGCTGCCGCCAGGGCCCCTCCCTGCCTTCCCCAGG  200

seq1  GAAGAGGACCATGAAGCCAAAGACTGTCTTCACTTTTAGTCTTTGGAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGGACCATGAAGCCAAAGACTGTCTTCACTTTTAGTCTTTGGAGGG  250

seq1  ATAAAGAGGAGTGTCCTTTATAAAAGCGCAGCTCTGTGGTAGCCAGGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGAGGAGTGTCCTTTATAAAAGCGCAGCTCTGTGGTAGCCAGGGAG  300

seq1  GTGAGCCCTTGGCTTTCTGGGGCTACCATGAAGACAGTAGAGTCTCTCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCCCTTGGCTTTCTGGGGCTACCATGAAGACAGTAGAGTCTCTCAC  350

seq1  GGGTTACTGAACCACAGAATTTTAAAACTAATTGCAACCTCAAGTGATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTACTGAACCACAGAATTTTAAAACTAATTGCAACCTCAAGTGATCT  400

seq1  TAAATTCCATATAGTCATAAATAAAAATCAAAAAGATCAAATTACTAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTCCATATAGTCATAAATAAAAATCAAAAAGATCAAATTACTAGGA  450

seq1  AATACAATGACAGTGAAAATCTCCAAAACTGATCATCTTAAAGTGGTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAATGACAGTGAAAATCTCCAAAACTGATCATCTTAAAGTGGTCTC  500

seq1  CGGCATTTCAGTGCGTGCCCACTGCTGGGCTTCAGTGTTTTCATCCTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCATTTCAGTGCGTGCCCACTGCTGGGCTTCAGTGTTTTCATCCTTGG  550

seq1  GTTGAATCTGGAGTGATGATGGAGTCCTGAGCCAACGGGACACCAGCCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAATCTGGAGTGATGATGGAGTCCTGAGCCAACGGGACACCAGCCAG  600

seq1  ATGAAGACACAGGGCCATCACAGTGAGCTAAGGAAAGGACACGCAGCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGACACAGGGCCATCACAGTGAGCTAAGGAAAGGACACGCAGCAGA  650

seq1  CTAGTCCTCACAGTCTCAGGGCTGGGCCCAGTGCTTCTCATGTTTCTCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTCCTCACAGTCTCAGGGCTGGGCCCAGTGCTTCTCATGTTTCTCAG  700

seq1  CCACAGCCTGAGGATGTTTGGGGCCATTTACTCTCTGTGGTGGTGGGATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGCCTGAGGATGTTTGGGGCCATTTACTCTCTGTGGTGGTGGGATC  750

seq1  CTGTGCAGAGGGGCTAGCATGGCAGACCTGCTGCCATCGGGTGAAAGTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCAGAGGGGCTAGCATGGCAGACCTGCTGCCATCGGGTGAAAGTTC  800

seq1  TGTTGGGTTGGCTTCTTGACTGGTGTCTGGGAACTTGGACTGGAGATGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGGTTGGCTTCTTGACTGGTGTCTGGGAACTTGGACTGGAGATGGT  850

seq1  TCCCATCACCCACAGAACTGGTAAGAGAGGTTCACTGTGCCCAAAACATA  900
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TCCCATCACCCACAGAACTGGTAAGAGAGGTTCACTGTGCCC-AAACATA  899

seq1  CAAACAAGACTGTATGTGCCAGGCAGGCCAGCCTATCCCATGCTACATTG  950
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  C-AACAAGACTGTATGTGCCAGGCAGGCCAGCCTATCCCATGCTACATTG  948

seq1  ACGTGCCAAATTGAAGATCCTGGGTACATGACAAAAACTTGCTTGCTCTA  1000
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ACGTGCCAAATTG-AGATCCTGGGTACATGACAAAAACTTGCTTGCTCTA  997

seq1  CAGG-AACCCAGTGGCCCACACAGACCACCCATCCAGAATGTAACCAGAT  1049
      |||| |||||||||||| ||||||||||||||| ||||||||| |  |||
seq2  CAGGAAACCCAGTGGCCAACACAGACCACCCAT-CAGAATGTACCAGGAT  1046

seq1  CCTG-CCTTGGAACAGGGTGCTGAAGTACAGCAGCTTTCCTAGCCTCTGA  1098
      |||| |||||||||| ||||||||||||||||||||||||||||||||||
seq2  CCTGCCCTTGGAACA-GGTGCTGAAGTACAGCAGCTTTCCTAGCCTCTGA  1095

seq1  AGGCTCT--ATGAG-AACTG-TTTGT-GAAGAGTTGGGGATTTTAGTACA  1143
      |||||||   |||| ||||| ||||| ||||||||||||| |||||||||
seq2  AGGCTCTTATTGAGAAACTGTTTTGTGGAAGAGTTGGGGA-TTTAGTACA  1144

seq1  TGC  1146
      |||
seq2  TGC  1147