BAC Information

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BAC

Clone NameB6Ng01-226F01
Chromosome2 (Build37)
Map Location 105,458,315 - 105,458,431
singlet/doubletsinglet
Overlap genePax6os1
Upstream geneCstf3, Tcp11l1, EG622282, OTTMUSG00000014964, Depdc7, Qser1, LOC100042995, 2310047K21Rik, LOC668744, Prrg4, Ccdc73, Ga17, 2210415I11Rik, LOC622356, Wt1, 0610012H03Rik, Rcn1, LOC100043391
Downstream genePax6, Elp4, LOC100043394, Immp1l, LOC100043402, Dph4, LOC668765, Dcdc5, 9330126M15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-226F01.bB6Ng01-226F01.g
ACCGA040288GA040289
length968844
definitionB6Ng01-226F01.b B6Ng01-226F01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacctgcctctgcctcccaagtgctgggattaaaggcgtgtgtgc
caccacgcccgccctcagggttgttttgatttacatttccctgatgacta
aggatgctgaacatttctttcggtgcttcttagctcttcaaatttcctca
gttgagaattctctgttatctctgttccccatttttaaatgcaattattt
ggtcctctgaagtctaactttttgagctctgtatatactggatattagcc
ctttatcagatgtaggattggtgaagatcttttcccaacctgttggtagc
cattttgtcctattgacagtgtcctttaccttacagaagctttgcaattt
tatggggtcccatttattgattcttgatcttagagcataagccattggtg
ttttgttcaggaaaattttccctgtgcccatgtgttcaagcatttttcct
cactttctcttctattagattcagagtatctggttttatgtggaggtcct
tgatccacttagacttgagctttgtacagggagataagaatggatcagtt
tgtattcttctacttgttgaccaccaattgaaccagcaccatttattgaa
aatgctgtctcttgtccagtggatgtttttagctcctttttcaaagatca
agtgaccataggtgagtgggttcatttctggatcttcaaatatattccat
tgatctacctgcctgtcactgtaccaataccatgcagtttttatcacagt
tgctctgtagcgcagcttgaggtcaggcatggtgattccacaagaggttc
ttttattgttgagaagagtttttgctatcttaggttttttgttattccag
atgaatttgcaaattgctctttctaactctgtgaagaattgagtgggaat
tttgatggggatgcattgattatgtagattgctttcgggcaagatggcct
atttttactatattaatc
gaattcctgtgtgtgtatgtgtttagagatagccactggggcttggataa
cctatcaggaggcttgtcactgaagaaaatttattttccctctctccaca
gccatagactgcctgtagctctatatttactggtggggctttgtttaatt
tcccattggcatgctgactatagggtcactatgtaggccatgtttaggca
accatactgttgagacttcatgggtacagcactcatgttatgtctagaag
atactgtcttacagccagctccctggtcctctcgctcttaagatctttca
gcctcttctttcacagtgttccctgaaacttgtgtgtaggggttgtgttg
tagatgtatcagctgggactgtacacctcacggtcacacatttgctgcat
ttgaactggttggggatctctgaagtagtctctgtctgctgccaatgagg
cttccttgatgaagggaaagagttgcatttacctgtggatatacagataa
gtgtttagaatacagttcgatgctatattgatttagaaaaatgtcagtag
tagtgcagtagtgaatcgtagatcctctaggatctgtgagctttccagac
atgagtagttgactgctttgaagtatttaagcatgagttcccttgtactg
aatggaccttaaatccaactcgatagctgttggtaccccctgagatagaa
tcgccacttgaaccaggtgtactcctggactggtcactgctgtgcttcac
agatttaacatcttgacaggattcctgactactgttagcaccttctaata
ctgtgagattagccttcaggagaaggaggactacctttaggaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_105458315_105458431
seq2: B6Ng01-226F01.g_796_909 (reverse)

seq1  CTTCCTGAAGGTTAGTCCTCCCTCTCCCTGAGGGCTAATCCTCACAGTAT  50
      |||||| |||| ||||||||| ||| ||||| ||||||| ||||||||||
seq2  CTTCCTAAAGG-TAGTCCTCCTTCT-CCTGAAGGCTAAT-CTCACAGTAT  47

seq1  TAGAAGGTGCTAACAGTAGTCAGGAATCCTGTCAAGATGTTAAATCTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGGTGCTAACAGTAGTCAGGAATCCTGTCAAGATGTTAAATCTGTG  97

seq1  AAGCACAGCAGTGACCA  117
      |||||||||||||||||
seq2  AAGCACAGCAGTGACCA  114