BAC Information

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BAC

Clone NameB6Ng01-227N23
Chromosome2 (Build37)
Map Location 86,198,755 - 86,199,809
singlet/doubletsinglet
Overlap genenone
Upstream geneGA_x5J8B7W531T-1286425-1285652, Olfr990-ps1, Olfr991-ps1, Olfr992, Olfr993, Olfr994, Olfr995, 4833423E24Rik, Olfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056
Downstream geneOlfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-227N23.bB6Ng01-227N23.g
ACCGA041428GA041429
length1,0581,212
definitionB6Ng01-227N23.b B6Ng01-227N23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctggacttcaatattctctaaatggaaattttagttaagtggaaa
taggttataaattttcctatctaagttggcaagggtgctatgttcctggc
tcctactccttaaggatataaaactgcccatatatttaaattaaattatt
tgtaaagcttcatgatgtacctttaaaataagtgatatgtctgtaatttg
tgatattaaaatcaaaatattctaaattatcttcaaatttcaatcatttt
aatggtaccaattttatgctacttctttccttcattcaaaccttgtccta
taaccacaccattatttgtcaaacacattgcctcatttttcactaattat
taatgcatggatatatgtgagggatccttttagtcaatagttcacaccct
ttcaattctgtaatcaccaaattagtagccttattcagtgacatggcttc
tttcagttttcaactatctgaaaatgtgacgtatttttgtttcatgcatg
tcactcactatattaagctctattttgcttcacattgctacaatcagtac
aaaaggatcaatatattctccttctaacaagatattgatatatcatcttt
gtagaatttgccaatgaatgtgatgtttatatacaaaaatgtaacaataa
ccacagccttttgattatttatcattttgagacagttttccttagtttcc
aaggctgggtttgaagtcacgatgcccttccctcagactcccaagtggct
ggaatatggactagaccattgtcttctctctttcagctctctctcttttt
ttctttttttaacctattttttattagatattttctttatatgcatttca
aatgctatcctgaaagttccctatactctcctctctctatctctctgtct
ctgtctctctctctctcattcacctgatctgatcagaagaaagtgaagat
ttataacaagtttcactcttaccttatagaatcacagtttcccaggagat
acaacggggttggatgaacgatctgagcacatgggattgccttatttatg
tagagggg
gaattcaagtcccaaaaataaaaccacacacctatggtcccttgatcttt
gcaaagaatctaaaaacatccagtagggggtcgaggggggggagagaaag
cattttcaacaaatgttgtttattcaactggtggtcaacatgtagaagaa
tgcaaattgatccattcttatctccctgtacaatgctcaagtcaaagtga
atcaaggacctccacataaaaccaaatacagtgaatctaatagacaaaat
atggggaagggcctcaaacacatgggcacagggaaatttttcctgaacag
aacaccagtggctgatgctcttagatcagcaatctacaaatgggacttca
taaaattacaaggcaaaggacactgtcaataggacaaaactacaaccaac
agagtgggactaaatctttaccaatcctacatacaatagagggataatat
ccaatatataataaactcaagaagttagatttcagagaaacaaacaaccc
aattaaaaaattgagggagcagagctaggcagagaattctcaactgagga
aactcaaatggcctagaagcacctaaggaaatgtttattgatattttctt
tatttacatctcaattgttaacccctttcctggttttccctctgaaaaac
ctctatcccctccccactcccattgctcaccaacccatgcactctactta
caggccctggcattccccttcacaggaccaaggtgataaccaactaggac
atcttctgctacatatgcagctagagccaaataacacattcaggatgtta
attaattaattacaatgaataaatgaatgaataaatatatgttttatata
aataataaaaaaaagaaatgttcaaaatcttttagttcaacagggaaatg
caagtcaaaacaatccccaagattccacctcatacccagtcagaatgcta
ggatcaaaaactcaggtgacagcagatgctggctaggatgttgagaaaga
ggaccactcctccattgctggtgttcataaataaggacgcatgcctccac
ttatgtttcatagcagcctttattttattaataagccagaagaacgaaaa
gacatcctagatgttcattcaaccaaggcattgcataccgaaaatattgg
taactttatacatggtcatactatactcagcgctattaaaacagtagtga
attctccgatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_86198755_86199809
seq2: B6Ng01-227N23.b_45_1102

seq1  GAATTCTGGACTTCAATATTCTCTAAATGGAAATTTTAGTTAAGTGGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGACTTCAATATTCTCTAAATGGAAATTTTAGTTAAGTGGAAA  50

seq1  TAGGTTATAAATTTTCCTATCTAAGTTGGCAAGGGTGCTATGTTCCTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTATAAATTTTCCTATCTAAGTTGGCAAGGGTGCTATGTTCCTGGC  100

seq1  TCCTACTCCTTAAGGATATAAAACTGCCCATATATTTAAATTAAATTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACTCCTTAAGGATATAAAACTGCCCATATATTTAAATTAAATTATT  150

seq1  TGTAAAGCTTCATGATGTACCTTTAAAATAAGTGATATGTCTGTAATTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGCTTCATGATGTACCTTTAAAATAAGTGATATGTCTGTAATTTG  200

seq1  TGATATTAAAATCAAAATATTCTAAATTATCTTCAAATTTCAATCATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTAAAATCAAAATATTCTAAATTATCTTCAAATTTCAATCATTTT  250

seq1  AATGGTACCAATTTTATGCTACTTCTTTCCTTCATTCAAACCTTGTCCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTACCAATTTTATGCTACTTCTTTCCTTCATTCAAACCTTGTCCTA  300

seq1  TAACCACACCATTATTTGTCAAACACATTGCCTCATTTTTCACTAATTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCACACCATTATTTGTCAAACACATTGCCTCATTTTTCACTAATTAT  350

seq1  TAATGCATGGATATATGTGAGGGATCCTTTTAGTCAATAGTTCACACCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCATGGATATATGTGAGGGATCCTTTTAGTCAATAGTTCACACCCT  400

seq1  TTCAATTCTGTAATCACCAAATTAGTAGCCTTATTCAGTGACATGGCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATTCTGTAATCACCAAATTAGTAGCCTTATTCAGTGACATGGCTTC  450

seq1  TTTCAGTTTTCAACTATCTGAAAATGTGACGTATTTTTGTTTCATGCATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTTTTCAACTATCTGAAAATGTGACGTATTTTTGTTTCATGCATG  500

seq1  TCACTCACTATATTAAGCTCTATTTTGCTTCACATTGCTACAATCAGTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCACTATATTAAGCTCTATTTTGCTTCACATTGCTACAATCAGTAC  550

seq1  AAAAGGATCAATATATTCTCCTTCTAACAAGATATTGATATATCATCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGATCAATATATTCTCCTTCTAACAAGATATTGATATATCATCTTT  600

seq1  GTAGAATTTGCCAATGAATGTGATGTTTATATACAAAAATGTAACAATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAATTTGCCAATGAATGTGATGTTTATATACAAAAATGTAACAATAA  650

seq1  CCACAGCCTTTTGATTATTTATCATTTTGAGACAGTTTTCCTTAGTTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGCCTTTTGATTATTTATCATTTTGAGACAGTTTTCCTTAGTTTCC  700

seq1  AAGGCTGGGTTTGAAGTCACGATGCCCTTCCCTCAGACTCCCAAGTGGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTGGGTTTGAAGTCACGATGCCCTTCCCTCAGACTCCCAAGTGGCT  750

seq1  GGAATATGGACTAGACCATTGTCTTCTCTCTTTCAGCTCTCTCTCTTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATATGGACTAGACCATTGTCTTCTCTCTTTCAGCTCTCTCTCTTTTT  800

seq1  TTCTTTTTTTAACCTATTTTTTATTAGATATTTTCTTTATATGCATTTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTTAACCTATTTTTTATTAGATATTTTCTTTATATGCATTTCA  850

seq1  AATGCTATCCTGAAAGTTCCCTATACTCTCCTCTCTCTATCTCTCTGTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTATCCTGAAAGTTCCCTATACTCTCCTCTCTCTATCTCTCTGTCT  900

seq1  CTGTCTCTCTCTCTCTCATTCACCTGATCTGATCAGAAGAAAGTGAAGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCTCTCTCTCTCATTCACCTGATCTGATCAGAAGAAAGTGAAGAT  950

seq1  TTATAACAAGTTTCACTCTTACCTTATAGAATCACAGTTTCCCAGGAGAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAACAAGTTTCACTCTTACCTTATAGAATCACAGTTTCCCAGGAGAT  1000

seq1  ACAAC-GGGTTGGATGAACGATCTGAAGCACAT-GGATTGCCT--ATTAT  1046
      ||||| ||||||||||||||||||| ||||||| |||||||||   ||||
seq2  ACAACGGGGTTGGATGAACGATCTG-AGCACATGGGATTGCCTTATTTAT  1049

seq1  GTAGAGGGG  1055
      |||||||||
seq2  GTAGAGGGG  1058