BAC Information

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BAC

Clone NameB6Ng01-228F17
Chromosome2 (Build37)
Map Location 23,928,251 - 23,929,412
singlet/doubletsinglet
Overlap geneTbpl2
Upstream geneAcbd5, Mastl, Yme1l1, 4931423N10Rik, LOC664835, Nxph2, LOC664822, 4921517N04Rik, LOC100039149, Sh3d2c-ps1, Hnmt
Downstream geneIl1f8, LOC215253, Il1f9, Il1f6, LOC620156, Il1f5, Il1f10, Il1rn, Psd4, Pax8, LOC433410, LOC664938, Cacna1b, Ehmt1, Arrdc1, Zmynd19, Wdr85, Mrpl41, Pnpla7, Nelf
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-228F17.bB6Ng01-228F17.g
ACCGA041789GA041790
length1,161655
definitionB6Ng01-228F17.b B6Ng01-228F17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccactgctttccaaatacaaagtcccaaaatccacattctttcaa
ataaaagcatggtcaggcctatcacagcaataccccactcccagtaccaa
cttctttattagttagggttttactgctgtgaacagacaccatgaccaag
gcaagtcttataaaaaacaacatttaattggggctggcttacaggttcag
aagttcagtccattatcatcaaggtgggagcatggcagtatccaggcagg
catggcacaggaggagctgagagttctatgtcttcatccaaaggctgcta
gtggaagactgatttccaagcaactagggtaaggatcttatacccacacc
cacagtgacacacccattccaaccaggtcacacctattccaacaaggcca
caccttcagatggtgccactccttggtccaaggatatataaaccatcaca
gagactaaggtttcctttgatgtccataccttacttagtaaggaaatatt
gaattaagtctgaggcacagttggaaggagaagattctacttagaatgta
aagggccctgggtctgatcctcatcactagaactagcactaacttgataa
aatcttgtttgaacatgtgagaatgagtaaagatggcacttggttgatgg
cttctagtgtaaaggaaggaatactggctgcatgtctccctcatagctgc
tgttttatgatttttttttgccttgtttttgaaataggattggctgtgtt
gctcaggatggctttgatcttatgatcctcctgctccggccttccaagtg
atagatataacatacatttaggtgtttttactgtttcttccattaacccc
ctttcttcttagctttctgctcacaaatataccagatacttattcctgtt
ttagctgaagctccatactcacataaaatctagttcctaacattcactgg
gttgtcctctaatattcactgggttgtcctctaacattcactgggttgtc
ctctaacattcactgtgttgtctctatctactttcaatggtggagagtgt
gatgatgatgattgatacttgctgagaagtgaatatggagctgattgaca
cttcctcagagaggtgcctatccgatttagtctataaggtccatatcagt
catgtcatgtc
gaattcctaatctttccaaaacgtttaacatgaagggatgttgaattctg
tcaagtgccttttcagcatctaatgaaatgatcatgtggttttttttttt
cctttgagtttgtttatgtagtggattacattgatagatttccacacatt
gaatcatccctgcgtcccttgatgaagcctatttgatcctggtgaatgat
agctttgatgttttcttggattcaagtttgagagaattttatagagtatt
ttttaatcaaagttcagaagggaaattggtctgaagttctctttctttgt
taggtttttgtgtggttttggtatcagtgtaactgtgaaaaaattgggta
gtgttccttctgtttctattttgtagaatagtttgaagacttttgatatt
aggtcttctttgaagatccgatagaattttgcactaagccatctggttct
tggtgggttttggttgggaagctttcagtgattattcctttaggggttat
ggaactgtttagatagtttatcttatcctgatttaactttgatacctagt
atctgtctagaaaatgtacacttcatccagatttttccagttttgttgag
tataggatttgcattatgatctgatgatattttgaattcctggttttttg
ttgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_23928251_23929412
seq2: B6Ng01-228F17.b_49_1209 (reverse)

seq1  GACATGACATGACTGATATGGA-CTTATAGAACTAAAATCAGATTAGACA  49
      |||||||||||||||||||||| ||||||| ||| ||||| || ||| ||
seq2  GACATGACATGACTGATATGGACCTTATAG-ACT-AAATCGGA-TAGGCA  47

seq1  -CTCTCTTGAGAAGTGTCAATCAGCTCC-TATTCACCTCTCACCAAGTAT  97
       ||||||   |||||||||||||||||| ||||||| ||||| |||||||
seq2  CCTCTCTGAGGAAGTGTCAATCAGCTCCATATTCACTTCTCAGCAAGTAT  97

seq1  CAATCATCAATCATCACACTCTCCACCATTGAAAGTAGATAGAGGACAAC  147
      |||||||| |||||||||||||||||||||||||||||||||| ||||||
seq2  CAATCATC-ATCATCACACTCTCCACCATTGAAAGTAGATAGA-GACAAC  145

seq1  ACAGTGAATGTTAGAGGACAACCCAGTGAATGTTAGAGGACAACCCAGTG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGAATGTTAGAGGACAACCCAGTGAATGTTAGAGGACAACCCAGTG  195

seq1  AATATTAGAGGACAACCCAGTGAATGTTAGGAACTAGATTTTATGTGAGT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTAGAGGACAACCCAGTGAATGTTAGGAACTAGATTTTATGTGAGT  245

seq1  ATGGAGCTTCAGCT-AAACAGGAATAAGTATCTGGTATATTTGTGAGCAG  296
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATGGAGCTTCAGCTAAAACAGGAATAAGTATCTGGTATATTTGTGAGCAG  295

seq1  AAAGCTAAGAAGAAAGGGGGTTAATGGAAGAAACAGTAAAAACACCTAAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTAAGAAGAAAGGGGGTTAATGGAAGAAACAGTAAAAACACCTAAA  345

seq1  TGTATGTTATATCTATCACTTGGAAGGCCGGAGCAGGAGGATCATAAGAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTTATATCTATCACTTGGAAGGCCGGAGCAGGAGGATCATAAGAT  395

seq1  CAAAGCCATCCTGAGCAACACAGCCAATCCTATTTCAAAAACAAGGCAAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCCATCCTGAGCAACACAGCCAATCCTATTTCAAAAACAAGGCAAA  445

seq1  AAAAAATCATAAAACAGCAGCTATGAGGGAGACATGCAGCCAGTATTCCT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATCATAAAACAGCAGCTATGAGGGAGACATGCAGCCAGTATTCCT  495

seq1  TCCTTTACACTAGAAGCCATCAACCAAGTGCCATCTTTACTCATTCTCAC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTACACTAGAAGCCATCAACCAAGTGCCATCTTTACTCATTCTCAC  545

seq1  ATGTTCAAACAAGATTTTATCAAGTTAGTGCTAGTTCTAGTGATGAGGAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCAAACAAGATTTTATCAAGTTAGTGCTAGTTCTAGTGATGAGGAT  595

seq1  CAGACCCAGGGCCCTTTACATTCTAAGTAGAATCTTCTCCTTCCAACTGT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCCAGGGCCCTTTACATTCTAAGTAGAATCTTCTCCTTCCAACTGT  645

seq1  GCCTCAGACTTAATTCAATATTTCCTTACTAAGTAAGGTATGGACATCAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAGACTTAATTCAATATTTCCTTACTAAGTAAGGTATGGACATCAA  695

seq1  AGGAAACCTTAGTCTCTGTGATGGTTTATATATCCTTGGACCAAGGAGTG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAACCTTAGTCTCTGTGATGGTTTATATATCCTTGGACCAAGGAGTG  745

seq1  GCACCATCTGAAGGTGTGGCCTTGTTGGAATAGGTGTGACCTGGTTGGAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCATCTGAAGGTGTGGCCTTGTTGGAATAGGTGTGACCTGGTTGGAA  795

seq1  TGGGTGTGTCACTGTGGGTGTGGGTATAAGATCCTTACCCTAGTTGCTTG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGTGTCACTGTGGGTGTGGGTATAAGATCCTTACCCTAGTTGCTTG  845

seq1  GAAATCAGTCTTCCACTAGCAGCCTTTGGATGAAGACATAGAACTCTCAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCAGTCTTCCACTAGCAGCCTTTGGATGAAGACATAGAACTCTCAG  895

seq1  CTCCTCCTGTGCCATGCCTGCCTGGATACTGCCATGCTCCCACCTTGATG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCTGTGCCATGCCTGCCTGGATACTGCCATGCTCCCACCTTGATG  945

seq1  ATAATGGACTGAACTTCTGAACCTGTAAGCCAGCCCCAATTAAATGTTGT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGGACTGAACTTCTGAACCTGTAAGCCAGCCCCAATTAAATGTTGT  995

seq1  TTTTTATAAGACTTGCCTTGGTCATGGTGTCTGTTCACAGCAGTAAAACC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATAAGACTTGCCTTGGTCATGGTGTCTGTTCACAGCAGTAAAACC  1045

seq1  CTAACTAATAAAGAAGTTGGTACTGGGAGTGGGGTATTGCTGTGATAGGC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTAATAAAGAAGTTGGTACTGGGAGTGGGGTATTGCTGTGATAGGC  1095

seq1  CTGACCATGCTTTTATTTGAAAGAATGTGGATTTTGGGACTTTGTATTTG  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCATGCTTTTATTTGAAAGAATGTGGATTTTGGGACTTTGTATTTG  1145

seq1  GAAAGCAGTGGAATTC  1162
      ||||||||||||||||
seq2  GAAAGCAGTGGAATTC  1161