BAC Information

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BAC

Clone NameB6Ng01-228I22
Chromosome2 (Build37)
Map Location 110,969,519 - 110,970,613
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668797, Bbox1, 1110018M03Rik, LOC668799, Slc5a12, Muc15, LOC668802
Downstream geneLOC623270, LOC623301, 4930430A15Rik, Olfr1275, Olfr1276, Olfr1277, Olfr1278, Olfr1279, Olfr1280, Olfr1281, Olfr1282, Olfr1283, Olfr1284, LOC100043465, Olfr1285, Olfr1286, Olfr1287, Olfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-228I22.bB6Ng01-228I22.g
ACCGA041940GA041941
length1,2141,096
definitionB6Ng01-228I22.b B6Ng01-228I22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttgaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccaccttacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacattttcacaatg
cagtactactcagccattaaaaaaaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataaatggatattagcccaaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aaaaatgaaggctgaagtgtggacactatgcccctccttataattgggaa
caaaacaaccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttaacggaa
aggacccagatgtagctgtctcttgtgagactatgacggggcctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcacagggctccc
agtggaggagctagagaaagtacccaaggaactaaagggatctgcaaccc
tataggtggaacaacattatggactaaccagtaccccggagcttctgact
ctagctgcatatgtatcaaaagatgggtctagtcggccatcactggaaag
aagaggctcaatgggactttgcaaactttatatgccccagtacagggcac
tcaagggtctaaggggaatgggtgggttcaagcaactggattgccagtcc
tattcgcgtgcaac
gaattcaaatttatgtttataatcactcaattatttttctactcttctca
cttcttgttttgctgtaaatatactttaattccacaaatcgaaaattaca
ctattttatacatatttatattctaagtaatttctttgtcttttctgtat
gccactcataatcattgtcacatttacgtggatctcagtttcaaaattga
atgtgacaaccttctcaactttcaaaagatttacatgaaatgtccctata
gaactgatgtctcccaagtggcccatcttaaagtcatgattgatctgcat
ggttgttttaggcatcaaacagagtagtgcccttcatgagttcagtttca
cagatatatacaattatatgttattgctattttccagtgagtatactcac
atgtttttctagtctgcttatgctaatctcctttgatacaaaaattcctc
ttatttttttctcatattgtcaatgtgcttctattcttttcttacatcta
aatctctcttctccttttatagactgcttacactttcatatctcttacat
aatcatgcacatatttatattcatatacaattttaaatatagtttctaca
tataagaaagatgtgtgttgctctttttggtcttgtttcttctactttat
tctacttgctttaaataaacgttattttaaacattattctatttgtctta
atctactttaaaaaattatctttaatcttcttttacagaccattattatt
cctcttctggtctgccctctgagagttcctcatcccattcttcctccctc
atctccaaggagatgtccccaccctatacccctatcataccaggcctcct
cactactcagggccctcaaaggctctccagggttaggtgtatattcttct
ttcactgaggccagacccagcagttctctgctgcatatgtgtctggggct
tcattcagttggtgtatgctgcctggttggtggctcagtgtctgagagag
ctagggggtctagttgaagactgcttcttctagctttcataatcatcaca
gtggtcttctggcttctgactaatggttgggtgtaagaaatctgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_110969519_110970613
seq2: B6Ng01-228I22.g_67_1162 (reverse)

seq1  AGCAGA-TTCTTACACCCAACCATTAGTCAGAAGCCAG-AGACCACTGTG  48
      |||||| ||||||||||||||||||||||||||||||| |||||||||||
seq2  AGCAGATTTCTTACACCCAACCATTAGTCAGAAGCCAGAAGACCACTGTG  50

seq1  AATGAATTATGAAAAGGCTAGAAGAAGCAGTC-TCAACTAGACCCCCTAG  97
       ||| |||||||||  |||||||||||||||| |||||||||||||||||
seq2  -ATG-ATTATGAAA--GCTAGAAGAAGCAGTCTTCAACTAGACCCCCTAG  96

seq1  CTCTCTCAGACACTGAGCCACCAACCAGGCAGCATACACCAACTGAATGA  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCAGACACTGAGCCACCAACCAGGCAGCATACACCAACTGAATGA  146

seq1  AGCCCCAGACACATATGCAGCAGAGAACTGCTGGGTCTGGCCTCAGTGAA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCAGACACATATGCAGCAGAGAACTGCTGGGTCTGGCCTCAGTGAA  196

seq1  AGAAGAATATACACCTAACCCTGGAGAGCC-TTGA-GGCCCTGAGTAGTG  245
      |||||||||||||||||||||||||||||| |||| ||||||||||||||
seq2  AGAAGAATATACACCTAACCCTGGAGAGCCTTTGAGGGCCCTGAGTAGTG  246

seq1  AGGAGGCCTGGTATGATAGGGGTATAGGGTGGGGACATCTCCTTGGAGAT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGCCTGGTATGATAGGGGTATAGGGTGGGGACATCTCCTTGGAGAT  296

seq1  GAGGGAGGAAGAATGGGATGAGGAACTCTCAGAGGGCAGACCAGAAGAGG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGGAAGAATGGGATGAGGAACTCTCAGAGGGCAGACCAGAAGAGG  346

seq1  AATAATAATGGTCTGTAAAAGAAGATTAAAGATAATTTTTTAAAGTAGAT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAATGGTCTGTAAAAGAAGATTAAAGATAATTTTTTAAAGTAGAT  396

seq1  TAAGACAAATAGAATAATGTTTAAAATAACGTTTATTTAAAGCAAGTAGA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACAAATAGAATAATGTTTAAAATAACGTTTATTTAAAGCAAGTAGA  446

seq1  ATAAAGTAGAAGAAACAAGACCAAAAAGAGCAACACACATCTTTCTTATA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTAGAAGAAACAAGACCAAAAAGAGCAACACACATCTTTCTTATA  496

seq1  TGTAGAAACTATATTTAAAATTGTATATGAATATAAATATGTGCATGATT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAAACTATATTTAAAATTGTATATGAATATAAATATGTGCATGATT  546

seq1  ATGTAAGAGATATGAAAGTGTAAGCAGTCTATAAAAGGAGAAGAGAGATT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAGAGATATGAAAGTGTAAGCAGTCTATAAAAGGAGAAGAGAGATT  596

seq1  TAGATGTAAGAAAAGAATAGAAGCACATTGACAATATGAGAAAAAAATAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGTAAGAAAAGAATAGAAGCACATTGACAATATGAGAAAAAAATAA  646

seq1  GAGGAATTTTTGTATCAAAGGAGATTAGCATAAGCAGACTAGAAAAACAT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAATTTTTGTATCAAAGGAGATTAGCATAAGCAGACTAGAAAAACAT  696

seq1  GTGAGTATACTCACTGGAAAATAGCAATAACATATAATTGTATATATCTG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTATACTCACTGGAAAATAGCAATAACATATAATTGTATATATCTG  746

seq1  TGAAACTGAACTCATGAAGGGCACTACTCTGTTTGATGCCTAAAACAACC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTGAACTCATGAAGGGCACTACTCTGTTTGATGCCTAAAACAACC  796

seq1  ATGCAGATCAATCATGACTTTAAGATGGGCCACTTGGGAGACATCAGTTC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGATCAATCATGACTTTAAGATGGGCCACTTGGGAGACATCAGTTC  846

seq1  TATAGGGACATTTCATGTAAATCTTTTGAAAGTTGAGAAGGTTGTCACAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGGACATTTCATGTAAATCTTTTGAAAGTTGAGAAGGTTGTCACAT  896

seq1  TCAATTTTGAAACTGAGATCCACGTAAATGTGACAATGATTATGAGTGGC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTTTGAAACTGAGATCCACGTAAATGTGACAATGATTATGAGTGGC  946

seq1  ATACAGAAAAGACAAAGAAATTACTTAGAATATAAATATGTATAAAATAG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGAAAAGACAAAGAAATTACTTAGAATATAAATATGTATAAAATAG  996

seq1  TGTAATTTTCGATTTGTGGAATTAAAGTATATTTACAGCAAAACAAGAAG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTTTCGATTTGTGGAATTAAAGTATATTTACAGCAAAACAAGAAG  1046

seq1  TGAGAAGAGTAGAAAAATAATTGAGTGATTATAAACATAAATTTGAATTC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGAGTAGAAAAATAATTGAGTGATTATAAACATAAATTTGAATTC  1096