BAC Information

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BAC

Clone NameB6Ng01-229K06
Chromosome2 (Build37)
Map Location 81,754,222 - 81,903,769
singlet/doubletdoublet
Overlap geneZfp804a
Upstream geneLOC100040655, LOC100040704
Downstream geneLOC100041308, A130030D18Rik, EG624362, LOC433550, LOC269292, LOC433440, Fsip2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-229K06.bB6Ng01-229K06.g
ACCGA042725GA042726
length1,038722
definitionB6Ng01-229K06.b B6Ng01-229K06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,903,236 - 81,903,769)(81,754,222 - 81,754,944)
sequence
gaattctcagtctcaggttctgcagcttaaaacaatatggactatgaatg
aacttgtcatcattaataatttgactcccaagcagctgaatttgggaagt
caactttcgtagttagaatagagatgatttgttttcagagtacagcaaca
gagtccagaaaagttctcaggatcttagaaatcatgcatgagttagcttc
acaggaggagaaaaagtgaacacagagactctggcagcttctgacaggac
tcctgtttgtcaccctccaccatcctaacacctctgctgtctaccatgct
tcatctaactggaccttcaattacactggtcatcataagaaattcatgca
atatgaagaagggaaggaaaatgcagaggggaactctcataagcaagaca
gttgcaagtcagtacagaaggaggagaaaaagaggaaaggagaaggaaga
agaaggaggagtaggagaagaaaagaaatggcaagcggccaaggtgggga
agaaaccatttttcttatccagctgtgaagcctatgaatcacagcaatga
gctctatggcaggatatacacaaacgtaatacagtggcactcatgtgttt
ttgacaaacaataactgtctaattgaacttaagctccctcagtagcagga
aaatgatgtctggtactggacacctaaacaactacctggatctaaagaaa
acatagatcctagaagagaatttatattggaactatactagaactgcata
ctttctagctatattatgaaccttatttcttatacccacagataagagtc
attcttaatcctcacagaaaagcttctcttcttgcaaattacagaaaact
acaactacagaaaacaaacatccatagattggatcatggggagccagccc
taaaggatacaatacaacactgctcttgcacttcaggctcctcagggaac
aatgaagaagggacaccaagaagattgtaagagccagaaggaacagggaa
gtcggcagtgagactatgtctcctagaaatggctgcct
gaattcttattggaattgatgttctcagtacatatatatatgcaaatata
tattatatactgatataaatattaaatatatgctacatataaataattta
agctatagttatagagtatattaatttggaccattttcaaatttctattt
ttattttatatatatatatatatatatatatatatatatatatatatata
tatatataaatatataaacaaaggtaactcaatctctgggtgcttaataa
aaacctattcttgtaagccttattatgtctgattcctctggtggtgaatt
cttgcaaatccaccatgatattgggaaaacttatcagctacatattaccc
ttctgctgtcctcattccccaaaaaaagccactttcaaatttctaagagg
taatcaaaattggtaaaccactgaaggtttcatattcttgtggttagtgg
ctctaagatgtaaatgtagacatagattcttcaccctggttatctcatgg
tgataatactatagtactgctgtccttatattaagtaccacactcatttt
ccaaatagaaggataatgatgaaaaggaagtgtattttgtttgattgact
gattgattttccagaatattatcacaatgtgagttaaaggaaaagaaaca
cataggaactgagttattcattcaaatcaatgggttttttgtttaagaat
gtatgtcttgcctgttaaagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_81903236_81903769
seq2: B6Ng01-229K06.b_45_578 (reverse)

seq1  TAGGCTTCACAGCTGGATAAGAAAAATGGTTTCTTCCCCACCTTGGCCGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTTCACAGCTGGATAAGAAAAATGGTTTCTTCCCCACCTTGGCCGC  50

seq1  TTGCCATTTCTTTTCTTCTCCTACTCCTCCTTCTTCTTCCTTCTCCTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCATTTCTTTTCTTCTCCTACTCCTCCTTCTTCTTCCTTCTCCTTTC  100

seq1  CTCTTTTTCTCCTCCTTCTGTACTGACTTGCAACTGTCTTGCTTATGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTTCTCCTCCTTCTGTACTGACTTGCAACTGTCTTGCTTATGAGA  150

seq1  GTTCCCCTCTGCATTTTCCTTCCCTTCTTCATATTGCATGAATTTCTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCCTCTGCATTTTCCTTCCCTTCTTCATATTGCATGAATTTCTTAT  200

seq1  GATGACCAGTGTAATTGAAGGTCCAGTTAGATGAAGCATGGTAGACAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACCAGTGTAATTGAAGGTCCAGTTAGATGAAGCATGGTAGACAGCA  250

seq1  GAGGTGTTAGGATGGTGGAGGGTGACAAACAGGAGTCCTGTCAGAAGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGTTAGGATGGTGGAGGGTGACAAACAGGAGTCCTGTCAGAAGCTG  300

seq1  CCAGAGTCTCTGTGTTCACTTTTTCTCCTCCTGTGAAGCTAACTCATGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGTCTCTGTGTTCACTTTTTCTCCTCCTGTGAAGCTAACTCATGCA  350

seq1  TGATTTCTAAGATCCTGAGAACTTTTCTGGACTCTGTTGCTGTACTCTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCTAAGATCCTGAGAACTTTTCTGGACTCTGTTGCTGTACTCTGA  400

seq1  AAACAAATCATCTCTATTCTAACTACGAAAGTTGACTTCCCAAATTCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAATCATCTCTATTCTAACTACGAAAGTTGACTTCCCAAATTCAGC  450

seq1  TGCTTGGGAGTCAAATTATTAATGATGACAAGTTCATTCATAGTCCATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGGGAGTCAAATTATTAATGATGACAAGTTCATTCATAGTCCATAT  500

seq1  TGTTTTAAGCTGCAGAACCTGAGACTGAGAATTC  534
      ||||||||||||||||||||||||||||||||||
seq2  TGTTTTAAGCTGCAGAACCTGAGACTGAGAATTC  534

seq1: chr2_81754222_81754944
seq2: B6Ng01-229K06.g_65_786

seq1  GAATTCTTATTGGAATTGATGTTCTCAGTACATATATATATGCAAATATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATTGGAATTGATGTTCTCAGTACATATATATATGCAAATATA  50

seq1  TATTATATACTGATATAAATATTAAATATATGCTACATATAAATAATTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATATACTGATATAAATATTAAATATATGCTACATATAAATAATTTA  100

seq1  AGCTATAGTTATAGAGTATATTAATTTGGACCATTTTCAAATTTCTATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATAGTTATAGAGTATATTAATTTGGACCATTTTCAAATTTCTATTT  150

seq1  TTATTTTATATATATATATATATATATATATATATATATATATATATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTATATATATATATATATATATATATATATATATATATATATATA  200

seq1  TATATATATTAGTTCAGAAACAATGGTAACTCAATCTCTGGGTGCAACAA  250
      ||||||||  | |  | |||||| |||||||||||||||||||||   ||
seq2  TATATATA--AATATATAAACAAAGGTAACTCAATCTCTGGGTGC-TTAA  247

seq1  CTAAAACCTAATCTTGTAAGCCTTATTAAAGTCTGATTCCTCTGGTGGTG  300
        |||||||| |||||||||||||||| | ||||||||||||||||||||
seq2  TAAAAACCTATTCTTGTAAGCCTTATT-ATGTCTGATTCCTCTGGTGGTG  296

seq1  AATTCTTGCAGATCCACCATGATATTGGGAAACCTTAGCAGCTACATATT  350
      |||||||||| ||||||||||||||||||||| |||| ||||||||||||
seq2  AATTCTTGCAAATCCACCATGATATTGGGAAAACTTATCAGCTACATATT  346

seq1  ACCCTTCTGCTGTCCTCATTCCCCAAAAAAAGCCACTTTCAAATTTCTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTCTGCTGTCCTCATTCCCCAAAAAAAGCCACTTTCAAATTTCTAA  396

seq1  GAGGTAATCAAAATTGGTAAACCACTGAAGGTTTCATATTCTTGTGGTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTAATCAAAATTGGTAAACCACTGAAGGTTTCATATTCTTGTGGTTA  446

seq1  GTGGCTCTAAGATGTCATTGTAGACATAGATTCTTCACCCTGGTTATCTC  500
      ||||||||||||||| | ||||||||||||||||||||||||||||||||
seq2  GTGGCTCTAAGATGTAAATGTAGACATAGATTCTTCACCCTGGTTATCTC  496

seq1  ATGGTGATAATACTATAGTACTGCTGTCCTTATATTAAGTACCACACTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGATAATACTATAGTACTGCTGTCCTTATATTAAGTACCACACTCA  546

seq1  TTTTCCAAATAGAAGGATAATGATGAAAAGGAAGTGTATTTTGTTTGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCAAATAGAAGGATAATGATGAAAAGGAAGTGTATTTTGTTTGATT  596

seq1  GACTGATTGATTTTCCAGAATATTATCACAATGTGAGTTAA--GGAAAGA  648
      |||||||||||||||||||||||||||||||||||||||||  | |||||
seq2  GACTGATTGATTTTCCAGAATATTATCACAATGTGAGTTAAAGGAAAAGA  646

seq1  AACAGCATAGGAACTGAGTTATTCATTCAAATCAATGGG-TTTTTGTTT-  696
      |||| |||||||||||||||||||||||||||||||||| ||||||||| 
seq2  AACA-CATAGGAACTGAGTTATTCATTCAAATCAATGGGTTTTTTGTTTA  695

seq1  AGAATGTATGTCTGCACTGTTAAAGTA  723
      |||||||||||||   |||||||||||
seq2  AGAATGTATGTCTTGCCTGTTAAAGTA  722