BAC Information

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BAC

Clone NameB6Ng01-230H04
Chromosome2 (Build37)
Map Location 39,760,151 - 39,761,064
singlet/doubletsinglet
Overlap genenone
Upstream geneNr6a1, Olfml2a, LOC624652, LOC100041071, 1700123D08Rik, Rpl35, Arpc5l, Golga1, A930041I02Rik, LOC100042584, Ppp6c, Vmn2r-ps2, Ppia-ps2_560.1
Downstream geneLOC100042604, Magmas-ps, LOC666531, Lrp1b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-230H04.bB6Ng01-230H04.g
ACCGA043310GA043311
length1,198920
definitionB6Ng01-230H04.b B6Ng01-230H04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccattttttaatggggctatttgttt
ttctggagtccaccttcttgagttctttatatatatatattggatattag
tcccctatctgatgtaggataggtaaagatcctttcccaatctgttggtg
gcctttatttcttattgacagtgtcttttgccttacagaagctttgcaat
tttatgaaatcccatttgtctattcttgatcttacagcacaagccattgc
tgttctattcaggaatttttccctgtacccatatcttcgaggctttcccc
cactttctcctctatatgtttcacggtctctggttttatgtggagttcct
tgatccacttagatttgaccttagtacaaggagatagaattggatcaatt
cacattcttctacatgataactgccagttgtgccagcaccatttgttgaa
aatgctgtcttttttccactggatggttttagctcccttgtcaaagatca
agtgaccataggtgtgtgggttaatttctgggtcttcaattctattccat
tggtctacttgtctgtcgctataccagtaccatgcagtttttatcacaat
tgctctgtagtatagctttaggtcaggcgtggtgattcctccagaggttc
ctgtattattgagtagagtttttgatatcctaggtttgttgttattccac
atgaattttcagattgccctttctaattcgttgaagtattgagttggaat
ttttgatgatgattgcattgaatctgtagactccttttagcaagatagcc
atttttactacaatgatcctgcaaatccatgagcctgggggacctttcta
ttttctgagatcttctttaatttctttcttcagagagttgaagttctcat
catatagatttatcacttccttagttagagacacgtcaaggtattttata
ttatttgtgactattgtgaagagtgtctttccctatttctttctcagctg
tttatcctttgtgtagagaaggccattgacttgtttgagttaagtttata
ttcagctacttcacctgaagctgtttatcaggttagacttcctttggtgt
aattttaggcctgctttaatggatttaattcaaatcatctcacaaagtgg
aattttttgacttctttcgttaccaatttgttatatctccccttgaga
gaattcaacactctcttctagcctctacagataccaggcactcatttggt
ttgtatacatacattcacgtaaaacatccacacacctaaaatgtaaatga
atgactcctttaaaaacgcaagaattaagggcagttaagagcacggtcag
ctcttgtaaaggtcatggttcagttcttaaaacctatatggacttccagc
ttcagggtatcttatacccacttcttgtctcagcatgcatcagacatgaa
tgtgatatagacatgtatccaaataaaacacttatacacataaaataaaa
taaacagtaagtaaaaaattcaagaattaaatacatacgtttaaaaaatt
taaaaatacgtcattataagctaattcaaaatggaatcttttgtattgat
gatattgtttagctagattaaacatacaaatatagctctagtattgagtg
tcatattatgtacctcatctcacagacatgcttatacctatccacaaata
cacacatacatacacacatacacacacttgcatgcacacacacatgcaca
tgccattcaagttctttttcgcttttaggtatgcattatacatattcttc
attttatatatatatatatatatatatatatatatatatatatatatata
tatgactcatttctgttttttccagttgtttggcgagagtgatagaatag
ctaataagcgggcataagagcgagaaagtgtgtgtgtatatgtgtgtgtg
tgtgtaataaaaatatttgtatgaaataaaaaggctgtgtggctctatca
gcacacacatacacacacacaggtgtgtttgttcatttttttttctaact
gctttcatcttgtactaatactgagacctcttttgggtgtgaaatattgg
gtgatagggaatttaatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_39760151_39761064
seq2: B6Ng01-230H04.g_67_986 (reverse)

seq1  AAAATT-AATTCCTTATCA-CCAATATTACACACCC-AAAGAGGTCACAG  47
      |||||| |||||| ||||| |||||||| ||||||| ||||||||| |||
seq2  AAAATTAAATTCCCTATCACCCAATATTTCACACCCAAAAGAGGTCTCAG  50

seq1  TAATAGTACAAGATG-AAGCAGTTAG-AAAAAAAATGAACAAACACAACT  95
      || |||||||||||| |||||||||| |||||||||||||||||||| ||
seq2  TATTAGTACAAGATGAAAGCAGTTAGAAAAAAAAATGAACAAACACACCT  100

seq1  GTCTGTGTCTATGTGTGGGCTGATAGTGCAACAAAGCATTTATATTTCAT  145
      || ||||| |||||||| |||||||| || ||| ||| ||| ||||||||
seq2  GTGTGTGTGTATGTGTGTGCTGATAGAGCCACACAGCCTTTTTATTTCAT  150

seq1  GAAAATGTTTTTCATACACA-ATTAAGATATATCAACTGAATTTTTCTAG  194
        |||| |||||  |||||| |   | | ||||  ||  |   ||||| |
seq2  ACAAATATTTTTATTACACACACACACACATATACACACACACTTTCTCG  200

seq1  TTTTTCTGACCGCTTATTAGCTATTATAACACTTTTGCCAAACAACTGGA  244
       | || || |||||||||||||||| || |||| | ||||||||||||||
seq2  CTCTTATGCCCGCTTATTAGCTATTCTATCACTCTCGCCAAACAACTGGA  250

seq1  AAAAACAGAAATGAGTCATATATATATATATATATATATATATATATATA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAGAAATGAGTCATATATATATATATATATATATATATATATATA  300

seq1  TATATATATATATATAAAATGAAGAATATGTATAATGCATACCTAAAAGC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATAAAATGAAGAATATGTATAATGCATACCTAAAAGC  350

seq1  GAAAAAGAACTTGAATGGCATGTGCATGTGTGTGTGCATGCAAGTGTGTG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGAACTTGAATGGCATGTGCATGTGTGTGTGCATGCAAGTGTGTG  400

seq1  TATGTGTGTATGTATGTGTGTATTTGTGGATAGGTATAAGCATGTCTGTG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTGTATGTATGTGTGTATTTGTGGATAGGTATAAGCATGTCTGTG  450

seq1  AGATGAGGTACATAATATGACACTCAATACTAGAGCTATATTTGTATGTT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAGGTACATAATATGACACTCAATACTAGAGCTATATTTGTATGTT  500

seq1  TAATCTAGCTAAACAATATCATCAATACAAAAGATTCCATTTTGAATTAG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTAGCTAAACAATATCATCAATACAAAAGATTCCATTTTGAATTAG  550

seq1  CTTATAATGACGTATTTTTAAATTTTTTAAACGTATGTATTTAATTCTTG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAATGACGTATTTTTAAATTTTTTAAACGTATGTATTTAATTCTTG  600

seq1  AATTTTTTACTTACTGTTTATTTTATTTTATGTGTATAAGTGTTTTATTT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTTACTTACTGTTTATTTTATTTTATGTGTATAAGTGTTTTATTT  650

seq1  GGATACATGTCTATATCACATTCATGTCTGATGCATGCTGAGACAAGAAG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACATGTCTATATCACATTCATGTCTGATGCATGCTGAGACAAGAAG  700

seq1  TGGGTATAAGATACCCTGAAGCTGGAAGTCCATATAGGTTTTAAGAACTG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTATAAGATACCCTGAAGCTGGAAGTCCATATAGGTTTTAAGAACTG  750

seq1  AACCATGACCTTTACAAGAGCTGACCGTGCTCTTAACTGCCCTTAATTCT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATGACCTTTACAAGAGCTGACCGTGCTCTTAACTGCCCTTAATTCT  800

seq1  TGCGTTTTTAAAGGAGTCATTCATTTACATTTTAGGTGTGTGGATGTTTT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTTTTTAAAGGAGTCATTCATTTACATTTTAGGTGTGTGGATGTTTT  850

seq1  ACGTGAATGTATGTATACAAACCAAATGAGTGCCTGGTATCTGTAGAGGC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGAATGTATGTATACAAACCAAATGAGTGCCTGGTATCTGTAGAGGC  900

seq1  TAGAAGAGAGTGTTGAATTC  914
      ||||||||||||||||||||
seq2  TAGAAGAGAGTGTTGAATTC  920