BAC Information

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BAC

Clone NameB6Ng01-231C24
Chromosome2 (Build37)
Map Location 156,170,490 - 156,360,190
singlet/doubletdoublet
Overlap geneLOC628707, LOC669792, 2900097C17Rik, LOC668941, Epb4.1l1
Upstream geneCdc91l1, Trp53inp2, Ncoa6, LOC668938, Ggtl3, Acss2, Gss, Myh7b, Trpc4ap, Edem2, Procr, Mmp24, Itgb4bp, 5530400B04Rik, 2410003P15Rik, Gdf5, Cep250, Ergic3, Fer1l4, Spag4, Cpne1, Rbm12, Nfs1, 2010100O12Rik, Rbm39, Phf20, Scand1, LOC632394
Downstream gene0610011L14Rik, Dlgap4, Myl9, LOC433546, Tgif2, LOC100043677, 1110008F13Rik, Sla2, LOC100043880, Ndrg3, LOC668943, Dsn1, 9830001H06Rik, Gm1332, Samhd1, Rbl1, LOC100043882, 4922505G16Rik, Rpn2, Ghrh, LOC100043678, Manbal, Src
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-231C24.bB6Ng01-231C24.g
ACCGA043853GA043854
length7151,216
definitionB6Ng01-231C24.b B6Ng01-231C24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(156,170,490 - 156,171,201)(156,358,998 - 156,360,190)
sequence
gaattcctatgccccatgcgggggcctaatgcaccccttatgtggtaaca
tttgtgtgcctggggaaagtgcacgtttctccattgttaaacttatcagc
accactggggggagtgttgttcttcccgggccaggcccctctcccaaagg
gattaaggctggctatcaccagagcaaaaggggatttatctcaggcctgt
tagttaagtaggtagcagattggtggagggctggaggggtggggaaagct
gccgaggcagattctgaactgcaaatgcccgatactcaggcgaaggagga
agccactctcacagcccttgcccacagtaaacaagcagctaaccagcact
tcccagcctgtgggaaccagcacatccaccagtgggacccaaagagcccc
agcacctttgctgcaagagcaggaattgaaatgattggcttccggactct
acaggttcgggggactgactatgctaaacttcatgttctctgcctcaggc
ttggaaggctgaggttacaggaccacccagggccactggaatggctttca
ttctgttctcacctccattattcatctgtaaaaatgggaccactcacggc
cgggcgtggtggcacacgccttttaatctcaggcactcgggaggcagagg
caggcagaactctgagttcagccctggtctacagagtgagttttaggata
gccaggtctacacag
gaattcctagggcaccccccagtcctaacaacaccctagaatctaagaat
cctagaataatgaaaagctgctccaggcaggacacagagcccccccccca
ccccccaggtcctcatcctgccacaggcaggaacatggtctctctggact
agactcagaccaaccagaatcaaagcactgggaaagacctgtccgtgatg
gactcaggaccactgctggtgcagccactgtcagaaaccagcctggaatc
caagcctcggcactcctcattccctgcgcctcctgctctacaagctgatg
cagctgtgtgtgtgtacatgtgtaactctgtgtgtttgtgtgtgtgtgtg
catgcccgcgtgcgtgagtacatgtgtgtatgcgcatgtgtgtccgtgtg
tctgtgtcctgtttacctccagccctgatgccagtgctttggttgcacca
gggggcactgatggacacctcgaggagcctatgggcatctgcaaatggtt
ctgagcccctgactgcactcgctgtgggctatgtgcttgcatcctctgct
ccgagtcccctagcctgagctggccctgcctacttaccggtgaaagagaa
cggatttccgtggccaccgtctgtgggcctgggatcatggcagctgcccc
cttcccggacttgagactgttctcctggggagacaatagtgctcagatgg
ccaggtctcagtttcaataggtctccaggatagccagggcatgtgaccat
gtggttatcatcaccatggggttgagaagtgacacagaagcagagagctg
aggcattcaacccccagagactcaatccccatagacacacacttgcatgc
ttgcttatagactcactcgacaaagatatactggatccccactattaggg
agtcacagtgaacaagatatggtactgcttctctggaagcactaaaagtc
aggaagcccaggcttcttgtcctggacctgctgtgaccttgaggcagacc
atttcctccctactgtcctgtgaaaaaaggactttccgcctaatcctcat
tgttgcccaataaggtgaagaacacataggttaaacaaaaggctgcgggt
taattcaggagcacagggcgagattgatcttgtaagttacttctggttac
cttgcctaagcactaaacattccactagctgggtgccttatgtgtgagta
ccttcacattaacctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_156170490_156171201
seq2: B6Ng01-231C24.b_41_755

seq1  GAATTCCTATGCCCCATGCGGGGGCCTAATGCACCCCTTATGTGGTAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATGCCCCATGCGGGGGCCTAATGCACCCCTTATGTGGTAACA  50

seq1  TTTGTGTGCCTGGGGAAAGTGCACGTTTCTCCATTGTTAAACTTATCAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTGCCTGGGGAAAGTGCACGTTTCTCCATTGTTAAACTTATCAGC  100

seq1  ACCACTGGGGGGAGTGTTGTTCTTCCCGGGCCAGGCCCCTCTCCCAAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTGGGGGGAGTGTTGTTCTTCCCGGGCCAGGCCCCTCTCCCAAAGG  150

seq1  GATTAAGGCTGGCTATCACCAGAGCAAAAGGGGATTTATCTCAGGCCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAGGCTGGCTATCACCAGAGCAAAAGGGGATTTATCTCAGGCCTGT  200

seq1  TAGTTAAGTAGGTAGCAGATTGGTGGAGGGCTGGAGGGGTGGGGAAAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAAGTAGGTAGCAGATTGGTGGAGGGCTGGAGGGGTGGGGAAAGCT  250

seq1  GCCGAGGCAGATTCTGAACTGCAAATGCCCGATACTCAGGCGAAGGAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGAGGCAGATTCTGAACTGCAAATGCCCGATACTCAGGCGAAGGAGGA  300

seq1  AGCCACTCTCACAGCCCTTGCCCACAGTAAACAAGCAGCTAACCAGCACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACTCTCACAGCCCTTGCCCACAGTAAACAAGCAGCTAACCAGCACT  350

seq1  TCCCAGCCTGTGGGAACCAGCACATCCACCAGTGGGACCCAAAGAGCCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGCCTGTGGGAACCAGCACATCCACCAGTGGGACCCAAAGAGCCCC  400

seq1  AGCACCTTTGCTGCAAGAGCAGGAATTGAAATGATTGGCTTCCGGACTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCTTTGCTGCAAGAGCAGGAATTGAAATGATTGGCTTCCGGACTCT  450

seq1  ACAGGTTCGGGGGACTGACTATGCTAAACTTCATGTTCTCTGCCTCAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTTCGGGGGACTGACTATGCTAAACTTCATGTTCTCTGCCTCAGGC  500

seq1  TTGGAAGGCTGAGGTTACAGGACCACCCAGGGCCACTGGAATGGCTTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGGCTGAGGTTACAGGACCACCCAGGGCCACTGGAATGGCTTTCA  550

seq1  TTCTGTTCTCACCTCCATTATTCATCTGT-AAAATGGGACCACTCACGGC  599
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTCTGTTCTCACCTCCATTATTCATCTGTAAAAATGGGACCACTCACGGC  600

seq1  CGGGCGTGGTGGCACACGCC-TTTAATCTCAGGCACTCGGGAGGCAGAGG  648
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CGGGCGTGGTGGCACACGCCTTTTAATCTCAGGCACTCGGGAGGCAGAGG  650

seq1  CAGGCAGAACTCTGAGTTCAG-CCTGGTCTACAGAGTGAGTTTCAGGATA  697
      ||||||||||||||||||||| ||||||||||||||||||||| ||||||
seq2  CAGGCAGAACTCTGAGTTCAGCCCTGGTCTACAGAGTGAGTTTTAGGATA  700

seq1  GCCAGGTCTACACAG  712
      |||||||||||||||
seq2  GCCAGGTCTACACAG  715

seq1: chr2_156358998_156360190
seq2: B6Ng01-231C24.g_68_1283 (reverse)

seq1  AAGGTTAA-GTGAGG----TCTCACAT-AGGCACCCAGCTAGTGGAATGT  44
      |||||||| |||| |    || ||||| ||||||||||||||||||||||
seq2  AAGGTTAATGTGAAGGTACTCACACATAAGGCACCCAGCTAGTGGAATGT  50

seq1  TTAGTGCCTAG--CAGGTACCAGGAAGT-ACTTACAAGATCCATCT--GC  89
      ||||||| |||   ||||| |  ||||| |||||||||||| ||||   |
seq2  TTAGTGCTTAGGCAAGGTAACCAGAAGTAACTTACAAGATCAATCTCGCC  100

seq1  CTGTGCTCCTGAATTTACCGGCAG-CTTTTGTTT-ACCTA--TGTTCTTC  135
      ||||||||||||||| ||| |||| ||||||||| |||||  ||||||||
seq2  CTGTGCTCCTGAATTAACCCGCAGCCTTTTGTTTAACCTATGTGTTCTTC  150

seq1  A-CTTA-TGGGC-ACAATG-GGATTAGGC-GAAGGTCC-TTTTTCACA-G  178
      | |||| ||||| |||||| ||||||||| ||| |||| ||||||||| |
seq2  ACCTTATTGGGCAACAATGAGGATTAGGCGGAAAGTCCTTTTTTCACAGG  200

seq1  ACAGTAGGGAGGAAATGGTTCTGCCTCAAGGTCCACAGCAGGTCCAGGAC  228
      |||||||||||||||||| ||||||||||||| |||||||||||||||||
seq2  ACAGTAGGGAGGAAATGG-TCTGCCTCAAGGT-CACAGCAGGTCCAGGAC  248

seq1  AAG-AGCCTGGGCTTCCTGACTTTTAGTGCTTCCAGAG-AGCAGTACCAT  276
      ||| |||||||||||||||||||||||||||||||||| |||||||||||
seq2  AAGAAGCCTGGGCTTCCTGACTTTTAGTGCTTCCAGAGAAGCAGTACCAT  298

seq1  ATCTTGTTCACTGTGACTCCCTAATAGTGGGGATCCAGTATATCTTTGTC  326
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGTTCACTGTGACTCCCTAATAGTGGGGATCCAGTATATCTTTGTC  348

seq1  GAGTGAGTCTATAAGCAAGCATGCAAGTGTGTGTCTATGGGGATTGAGTC  376
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAGTCTATAAGCAAGCATGCAAGTGTGTGTCTATGGGGATTGAGTC  398

seq1  TCTGGGGGTTGAATGCCTCAGCTCTCTGCTTCTGTGTCACTTCTCAACCC  426
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGGGTTGAATGCCTCAGCTCTCTGCTTCTGTGTCACTTCTCAACCC  448

seq1  CATGGTGATGATAACCACATGGTCACATGCCCTGGCTATCCTGGAGACCT  476
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTGATGATAACCACATGGTCACATGCCCTGGCTATCCTGGAGACCT  498

seq1  ATTG-AACTGAGACCTGGCCATCTGAGCACTATTGTCTCCCCAGGAGAAC  525
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAACTGAGACCTGGCCATCTGAGCACTATTGTCTCCCCAGGAGAAC  548

seq1  AGTCTCAAGTCCGGGAAGGGGGCAGCTGCCATGATCCCAGGCCCACAGAC  575
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCAAGTCCGGGAAGGGGGCAGCTGCCATGATCCCAGGCCCACAGAC  598

seq1  GGTGGCCACGGAAATCCGTTCTCTTTCACCGGTAAGTAGGCAGGGCCAGC  625
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCCACGGAAATCCGTTCTCTTTCACCGGTAAGTAGGCAGGGCCAGC  648

seq1  TCAGGCTAGGGGACTCGGAGCAGAGGATGCAAGCACATAGCCCACAGCGA  675
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCTAGGGGACTCGGAGCAGAGGATGCAAGCACATAGCCCACAGCGA  698

seq1  GTGCAGTCAGGGGCTCAGAACCATTTGCAGATGCCCATAGGCTCCTCGAG  725
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGTCAGGGGCTCAGAACCATTTGCAGATGCCCATAGGCTCCTCGAG  748

seq1  GTGTCCATCAGTGCCCCCTGGTGCAACCAAAGCACTGGCATCAGGGCTGG  775
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCATCAGTGCCCCCTGGTGCAACCAAAGCACTGGCATCAGGGCTGG  798

seq1  AGGTAAACAGGACACAGACACACGGACACACATGCGCATACACACATGTA  825
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAACAGGACACAGACACACGGACACACATGCGCATACACACATGTA  848

seq1  CTCACGCACGCGGGCATGCACACACACACACAAACACACAGAGTTACACA  875
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACGCACGCGGGCATGCACACACACACACAAACACACAGAGTTACACA  898

seq1  TGTACACACACACAGCTGCATCAGCTTGTAGAGCAGGAGGCGCAGGGAAT  925
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACACACACACAGCTGCATCAGCTTGTAGAGCAGGAGGCGCAGGGAAT  948

seq1  GAGGAGTGCCGAGGCTTGGATTCCAGGCTGGTTTCTGACAGTGGCTGCAC  975
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGTGCCGAGGCTTGGATTCCAGGCTGGTTTCTGACAGTGGCTGCAC  998

seq1  CAGCAGTGGTCCTGAGTCCATCACGGACAGGTCTTTCCCAGTGCTTTGAT  1025
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTGGTCCTGAGTCCATCACGGACAGGTCTTTCCCAGTGCTTTGAT  1048

seq1  TCTGGTTGGTCTGAGTCTAGTCCAGAGAGACCATGTTCCTGCCTGTGGCA  1075
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTTGGTCTGAGTCTAGTCCAGAGAGACCATGTTCCTGCCTGTGGCA  1098

seq1  GGATGAGGACCTGGGGGGTGGGGGGGGGGCTCTGTGTCCTGCCTGGAGCA  1125
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGAGGACCTGGGGGGTGGGGGGGGGGCTCTGTGTCCTGCCTGGAGCA  1148

seq1  GCTTTTCATTATTCTAGGATTCTTAGATTCTAGGGTGTTGTTAGGACTGG  1175
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTCATTATTCTAGGATTCTTAGATTCTAGGGTGTTGTTAGGACTGG  1198

seq1  GGGGTGCCCTAGGAATTC  1193
      ||||||||||||||||||
seq2  GGGGTGCCCTAGGAATTC  1216