BAC Information

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BAC

Clone NameB6Ng01-231H24
Chromosome2 (Build37)
Map Location 73,195,046 - 73,357,969
singlet/doubletdoublet
Overlap geneGpr155, Wipf1
Upstream geneB230120H23Rik, Cdca7, LOC383712, LOC635960, LOC100039928, 6430710C18Rik, Sp3, Hspe1-ps5, Gtpbp9, LOC620110, Sp9, 1700023B02Rik, Scrn3
Downstream geneChrna1, Chn1, Atf2, Atp5g3, LOC667729, LOC100040172, Lnp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-231H24.bB6Ng01-231H24.g
ACCGA044086GA044087
length1,1441,010
definitionB6Ng01-231H24.b B6Ng01-231H24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,195,046 - 73,196,190)(73,356,940 - 73,357,969)
sequence
gaattcaaaaccatttcctaaaacacaagactctcattcatcgctttcat
aaacacaacggctctgctgattaccgtggaaaagtcaaaccaacgttggc
ctaaatgaaagccacctgtgagtccaactctccgtctgcccgccccagct
gttggacggaaggcatcgccttctttctggacagtcctttcagtcctccg
gaagctgcatctggacgctgtcgatgaaatcctcttctgggtccacctca
gcaggcgcttccctcaggcactcgtgcctcaggagtctggcaaatgtgag
cctaacagttctctgctttttccaagcacacagggccggagcgctggcag
gttctcaggcaggctgttctccataagtcaccgtgagtcgtgcgctgtgt
ggctatagtttttctgtttttattcatttattatacttatatatttgttt
gtttatagatttattttacacatttatttcctcagataactgcacagagt
accctttaaaaatttttttacagttatatagccatagtgtttcctgacat
agattgcaatattaatagagtaataattttggtgattaaacttttaaaat
gtacatgttagaaaaatgagttatacttaggcttaacctcttattgataa
tgtacttaagttcgtctgtgatattcttaaagacaaaagtatttcaacgt
ataaaacttattatgtgtaggccattacaaatgtctttttagttaagatg
ataatgccacctcaaggttagaaagagaaccacagaataacagaagagaa
aataaactatctagcctagctctccagaaacatgaaaggtttaaatagta
aaattacataaaaaagatgtaaaaattaagaaaacacatgaggctattac
aatggcttatctatagaaaatgagcacacacacacacacacaaataagca
atatggcctctgtaaaaaaaaaaaaaaaagaaaagaaactgttttacagt
ttttcagtgtgatggtttatagatgctcagtcagagagtgcactattagg
gaagtgtgccctgttggagtaagtgtgtcactggtgggtgtgggctctaa
aaccctcatctagctgcctagaaagtcagattctggctagcagc
gaattcacattctcgctaacacgatttgaaagtgtttccctacaaccctg
ccacacagttcattttagagtacaaactttctgctctccatttcttcatt
tatttcaaatgattcctttacggaatccttgtcaatatctttgccttaag
gagaaaaaaaaaaaaagcacacatttaaattattcatacccgatcttttt
cttaattttttatgtgtatatgtttgacttctagaatcaggaaagaaaaa
tttatgcctaatctcacagagattaattgttctgtgctaaactaaaacaa
aacactttctatttataataaagtcagtagagacctttcaatcctgattt
tttcccttctaaacgtgtattatttaagacattgtctcagaaaatataaa
tgtattaataatgggaagatcagaaacgtaccaaatacaaagttggggat
acttacagagtcttaagcctacagagctaatcaggtttcccttgaatcca
aaaacaccgaaggttctttgaagacgttcattgcaggctctgctgagaaa
ttacacagagaggaaaaagggaatcgtagcagatagggattgaaacctgg
agagtattgaaagccccaccctccttactcctgctgattttcctgggagg
tgagaccacattccacatcccctgcccttgtgctcgctgggagttcatta
taaaattatttgtgtataactccagcagtacagagttctggctaatcaga
aacagctgcacaactgcaatcgtttataagaacagaacaacaaaatcaat
cagcaagatttttttgtttttgtctttgagtaggtcaggccaacattgtg
tagtccagaatacagcattttgtaactaactttacacggatcgggttaaa
tcactggagccacagaagttgattaaaatagaacatccggcgtgtggcgc
atgcttatccacacttggagcagagacggtgatccatgagttcaaggcca
ccctgatctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_73195046_73196190
seq2: B6Ng01-231H24.b_46_1189

seq1  GAATTCAAAACCATTTCCTAAAACACAAGACTCTCATTCATCGCTTTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAACCATTTCCTAAAACACAAGACTCTCATTCATCGCTTTCAT  50

seq1  AAACACAACGGCTCTGCTGATTACCGTGGAAAAGTCAAACCAACGTTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACAACGGCTCTGCTGATTACCGTGGAAAAGTCAAACCAACGTTGGC  100

seq1  CTAAATGAAAGCCACCTGTGAGTCCAACTCTCCGTCTGCCCGCCCCAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATGAAAGCCACCTGTGAGTCCAACTCTCCGTCTGCCCGCCCCAGCT  150

seq1  GTTGGACGGAAGGCATCGCCTTCTTTCTGGACAGTCCTTTCAGTCCTCCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGACGGAAGGCATCGCCTTCTTTCTGGACAGTCCTTTCAGTCCTCCG  200

seq1  GAAGCTGCATCTGGACGCTGTCGATGAAATCCTCTTCTGGGTCCACCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTGCATCTGGACGCTGTCGATGAAATCCTCTTCTGGGTCCACCTCA  250

seq1  GCAGGCGCTTCCCTCAGGCACTCGTGCCTCAGGAGTCTGGCAAATGTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCGCTTCCCTCAGGCACTCGTGCCTCAGGAGTCTGGCAAATGTGAG  300

seq1  CCTAACAGTTCTCTGCTTTTTCCAAGCACACAGGGCCGGAGCGCTGGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACAGTTCTCTGCTTTTTCCAAGCACACAGGGCCGGAGCGCTGGCAG  350

seq1  GTTCTCAGGCAGGCTGTTCTCCATAAGTCACCGTGAGTCGTGCGCTGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCAGGCAGGCTGTTCTCCATAAGTCACCGTGAGTCGTGCGCTGTGT  400

seq1  GGCTATAGTTTTTCTGTTTTTATTCATTTATTATACTTATATATTTGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATAGTTTTTCTGTTTTTATTCATTTATTATACTTATATATTTGTTT  450

seq1  GTTTATAGATTTATTTTACACATTTATTTCCTCAGATAACTGCACAGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATAGATTTATTTTACACATTTATTTCCTCAGATAACTGCACAGAGT  500

seq1  ACCCTTTAAAAATTTTTTTACAGTTATATAGCCATAGTGTTTCCTGACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTTAAAAATTTTTTTACAGTTATATAGCCATAGTGTTTCCTGACAT  550

seq1  AGATTGCAATATTAATAGAGTAATAATTTTGGTGATTAAACTTTTAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGCAATATTAATAGAGTAATAATTTTGGTGATTAAACTTTTAAAAT  600

seq1  GTACATGTTAGAAAAATGAGTTATACTTAGGCTTAACCTCTTATTGATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATGTTAGAAAAATGAGTTATACTTAGGCTTAACCTCTTATTGATAA  650

seq1  TGTACTTAAGTTCGTCTGTGATATTCTTAAAGACAAAAGTATTTCAACGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTTAAGTTCGTCTGTGATATTCTTAAAGACAAAAGTATTTCAACGT  700

seq1  ATAAAACTTATTATGTGTAGGCCATTACAAATGTCTTTTTAGTTAAGATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACTTATTATGTGTAGGCCATTACAAATGTCTTTTTAGTTAAGATG  750

seq1  ATAATGCCACCTCAAGGTTAGAAAGAGAACCACAGAATAACAGAAGAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGCCACCTCAAGGTTAGAAAGAGAACCACAGAATAACAGAAGAGAA  800

seq1  AATAAACTATCTAGCCTAGCTCTCCAGAAACATG-AAGGTTTAAATAGTA  849
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AATAAACTATCTAGCCTAGCTCTCCAGAAACATGAAAGGTTTAAATAGTA  850

seq1  AAATTACATAAAAAAGATGTAAAAATTAAGAAAACACATGAGGCTATTAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTACATAAAAAAGATGTAAAAATTAAGAAAACACATGAGGCTATTAC  900

seq1  AATGGCTTATCTATAGAAAATGAGCACACACACACACACACAAATAAGCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCTTATCTATAGAAAATGAGCACACACACACACACACAAATAAGCA  950

seq1  ATATGGCCTCTGTAAAAAAAAAAAAAAAAAGAAAAGAAACTGTTTTACAG  999
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATATGGCCTCTGT-AAAAAAAAAAAAAAAAGAAAAGAAACTGTTTTACAG  999

seq1  TTTTTCAGTGTGATGGTTTATAGATGCTCAGCCCAGAGAGTGGCACTATT  1049
      |||||||||||||||||||||||||||||||  |||||||| ||||||||
seq2  TTTTTCAGTGTGATGGTTTATAGATGCTCAG-TCAGAGAGT-GCACTATT  1047

seq1  A-GGAAGTGTGGCCCTGTTGGAGTAGGTGTGTCACT-GTGGGTGTGGGCT  1097
      | |||||||| |||||||||||||| |||||||||| |||||||||||||
seq2  AGGGAAGTGT-GCCCTGTTGGAGTAAGTGTGTCACTGGTGGGTGTGGGCT  1096

seq1  CTAAGACCCTCATCATAGCTGCCTAG-AAGTCAGTATTCT-GCTAGCAGC  1145
      |||| ||||||||| ||||||||||| ||||||| ||||| |||||||||
seq2  CTAAAACCCTCATC-TAGCTGCCTAGAAAGTCAG-ATTCTGGCTAGCAGC  1144

seq1: chr2_73356940_73357969
seq2: B6Ng01-231H24.g_66_1074 (reverse)

seq1  AGATCAGGTTGGCCTTGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAG  50
      |||||||| ||||||||||||||   || |||| | ||||||   |||||
seq2  AGATCAGGGTGGCCTTGAACTCATGGAT-CACC-GTCTCTGC--TCCAAG  46

seq1  TGCTGGGATTAAAGGCATGCGCCACCACGCCCGGATGTTTTCCTAATTTT  100
      || |||    | | |||||||||| |||| |||||||||   |||  |||
seq2  TG-TGG----ATAAGCATGCGCCA-CACG-CCGGATGTT---CTA--TTT  84

seq1  TAATTCCAACTTCTGTGGCTCCAGTGATTTTTAACCCGATCCGTGTAAAG  150
      ||||  |||||||||||||||||||||  |||||||||||||||||||||
seq2  TAAT--CAACTTCTGTGGCTCCAGTGA--TTTAACCCGATCCGTGTAAAG  130

seq1  TTAGTTACAAAATGCTGTTATTCTGGACTACACAATGTTGGCCTGACCTA  200
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTAGTTACAAAATGCTG-TATTCTGGACTACACAATGTTGGCCTGACCTA  179

seq1  CTCAAAGACAAAAACAAAAAAATCTTGCTGATTGATTTTGTTGTTCTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAGACAAAAACAAAAAAATCTTGCTGATTGATTTTGTTGTTCTGTT  229

seq1  CTTATAAACGATTGCAGTTGTGCAGCTGTTTCTGATTAGCCAGAACTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAAACGATTGCAGTTGTGCAGCTGTTTCTGATTAGCCAGAACTCTG  279

seq1  TACTGCTGGAGTTATACACAAATAATTTTATAATGAACTCCCAGCGAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCTGGAGTTATACACAAATAATTTTATAATGAACTCCCAGCGAGCA  329

seq1  CAAGGGCAGGGGATGTGGAATGTGGTCTCACCTCCCAGGAAAATCAGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGCAGGGGATGTGGAATGTGGTCTCACCTCCCAGGAAAATCAGCAG  379

seq1  GAGTAAGGAGGGTGGGGCTTTCAATACTCTCCAGGTTTCAATCCCTATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAGGAGGGTGGGGCTTTCAATACTCTCCAGGTTTCAATCCCTATCT  429

seq1  GCTACGATTCCCTTTTTCCTCTCTGTGTAATTTCTCAGCAGAGCCTGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACGATTCCCTTTTTCCTCTCTGTGTAATTTCTCAGCAGAGCCTGCAA  479

seq1  TGAACGTCTTCAAAGAACCTTCGGTGTTTTTGGATTCAAGGGAAACCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACGTCTTCAAAGAACCTTCGGTGTTTTTGGATTCAAGGGAAACCTGA  529

seq1  TTAGCTCTGTAGGCTTAAGACTCTGTAAGTATCCCCAACTTTGTATTTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTCTGTAGGCTTAAGACTCTGTAAGTATCCCCAACTTTGTATTTGG  579

seq1  TACGTTTCTGATCTTCCCATTATTAATACATTTATATTTTCTGAGACAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGTTTCTGATCTTCCCATTATTAATACATTTATATTTTCTGAGACAAT  629

seq1  GTCTTAAATAATACACGTTTAGAAGGGAAAAAATCAGGATTGAAAGGTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAAATAATACACGTTTAGAAGGGAAAAAATCAGGATTGAAAGGTCT  679

seq1  CTACTGACTTTATTATAAATAGAAAGTGTTTTGTTTTAGTTTAGCACAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGACTTTATTATAAATAGAAAGTGTTTTGTTTTAGTTTAGCACAGA  729

seq1  ACAATTAATCTCTGTGAGATTAGGCATAAATTTTTCTTTCCTGATTCTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTAATCTCTGTGAGATTAGGCATAAATTTTTCTTTCCTGATTCTAG  779

seq1  AAGTCAAACATATACACATAAAAAATTAAGAAAAAGATCGGGTATGAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAAACATATACACATAAAAAATTAAGAAAAAGATCGGGTATGAATA  829

seq1  ATTTAAATGTGTGCTTTTTTTTTTTTTCTCCTTAAGGCAAAGATATTGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAATGTGTGCTTTTTTTTTTTTTCTCCTTAAGGCAAAGATATTGAC  879

seq1  AAGGATTCCGTAAAGGAATCATTTGAAATAAATGAAGAAATGGAGAGCAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTCCGTAAAGGAATCATTTGAAATAAATGAAGAAATGGAGAGCAG  929

seq1  AAAGTTTGTACTCTAAAATGAACTGTGTGGCAGGGTTGTAGGGAAACACT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTGTACTCTAAAATGAACTGTGTGGCAGGGTTGTAGGGAAACACT  979

seq1  TTCAAATCGTGTTAGCGAGAATGTGAATTC  1030
      ||||||||||||||||||||||||||||||
seq2  TTCAAATCGTGTTAGCGAGAATGTGAATTC  1009