BAC Information

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BAC

Clone NameB6Ng01-231K05
Chromosome2 (Build37)
Map Location 16,758,156 - 16,954,123
singlet/doubletdoublet
Overlap gene4930515L03Rik, LOC383665
Upstream geneLOC625457, Plxdc2
Downstream geneNebl, LOC100041319, LOC100041047, 1700113O17Rik, A930004D18Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-231K05.bB6Ng01-231K05.g
ACCGA044187GA044188
length9801,052
definitionB6Ng01-231K05.b B6Ng01-231K05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(16,758,156 - 16,758,796)(16,953,070 - 16,954,123)
sequence
gaattctgaggaccatctgtcaaggctattgtcatttttctaaggccatt
agatcttctaaaccatttctcccttaagtttctcagctcccttctctctc
tctttctcccccactctccctctgtccctcatctagtagatatggtttcc
taaagcaatcatttatcaacatataattgattcccttaaaaagaaatcag
attcacacttctttccagaataggcctttctgtgtctttagatatccggt
aagatgcttgagaaacattgcccttaatttctaaaattccttttacttaa
aggatctatgatccttaagcccaggccttttgattctcatgagtcctaca
tagtcacacctggaaatctctctgaagtcttaatatagactcctagagcc
atgctgagatttaataccctgttattctaggagtgcctcagatttggtct
ctaccccgaagctatttctgacaatttttttttcctgagagcaaaatagt
ttattttcaatagtaaaagtttctaaacttacattgaaaagttaactgtt
gttgtttgtaggttaagtttggctttctcttcctttattttaccttgttt
acctaaaatggaaatggctggctttcagcaacttacctggaagtacccct
agttaaatctacaagtccatcagcaagattacctattttcattattctgc
aagtgatagttttgctgtatttttttaactcccatataatgcaagtgatc
agttgcttagcaccttccttgtctatctggacaactttctccgtaggccc
tttatctcccagctgctacctgatgccaaagctgatactatagccagtag
ctgggccagcagccaaagatgaactgggttacctgaaacgggggttggaa
atgttaaaaggaatgggatgctagagaaggatgaagcccagacaaagttt
ctgatctaggctcaaattttaatattcagg

gaattcaattgctacaaaagaaatcccagttaatggaatccttgtggctg
gagacctgagaggatgtttcagaaagccaggatttaaatcctgattgttc
tgcagagagggaaattataatgaacacttttcaacaaatacacatgacca
tagtctactctttcataggtaagcatgattttaaaattaaaatttgatga
atagccaaagcaaaattgtaaaccggattaggcctgttgtttctaagcaa
ctgaatgaataaacattataaagtcctacaaggccaagtctatgatgatt
tcatatttactggattacatattatatgaaacatttttagtagtgtgtgc
atgttttatatcttgggtttagcaacacagactctcttgtctcttgtccc
aggaaactattgtcttttattctcattactgttttttgaaagcctgtgaa
gaaattccttgttttgtttttcgagacagggtttctctgtatagccctgg
ctgtcctggaactcactttgtagaccaggctggcctcaaactcagaaatc
tgcctgtctctgcctcccaagttctaagaagttcttaacacagtagttgg
tttctggcatagaaactcaacctgcttaaaagaaacttttaaccaaaaat
aattacctaaaatttctataattggctgatcttgtgtttctcctataaca
ccgtttcttccttcttagtccacagtacactcacaccccttcctttctgg
ttcagggacctgtgagataaagtttagaaccttttggatgggttcaatca
tcataaactgactattgcttctgttgattaaggcaaaagccattaaagag
agacagggaaactcttcagttgtggatagccccggggctaattatatttg
atgttaattccattttcctgtgagtggctgcaaacaagcaaattgtcagc
agtcagtgatttcctgttaaacctgcttcccaccttaatttgtaaaataa
ggagagctgatcagtgggaagataaaaaagaaggtgagtgaagttgaagg
gg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_16758156_16758796
seq2: B6Ng01-231K05.b_45_685

seq1  GAATTCTGAGGACCATCTGTCAAGGCTATTGTCATTTTTCTAAGGCCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGGACCATCTGTCAAGGCTATTGTCATTTTTCTAAGGCCATT  50

seq1  AGATCTTCTAAACCATTTCTCCCTTAAGTTTCTCAGCTCCCTTCTCTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTTCTAAACCATTTCTCCCTTAAGTTTCTCAGCTCCCTTCTCTCTC  100

seq1  TCTTTCTCCCCCACTCTCCCTCTGTCCCTCATCTAGTAGATATGGTTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTCCCCCACTCTCCCTCTGTCCCTCATCTAGTAGATATGGTTTCC  150

seq1  TAAAGCAATCATTTATCAACATATAATTGATTCCCTTAAAAAGAAATCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCAATCATTTATCAACATATAATTGATTCCCTTAAAAAGAAATCAG  200

seq1  ATTCACACTTCTTTCCAGAATAGGCCTTTCTGTGTCTTTAGATATCCGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACACTTCTTTCCAGAATAGGCCTTTCTGTGTCTTTAGATATCCGGT  250

seq1  AAGATGCTTGAGAAACATTGCCCTTAATTTCTAAAATTCCTTTTACTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGCTTGAGAAACATTGCCCTTAATTTCTAAAATTCCTTTTACTTAA  300

seq1  AGGATCTATGATCCTTAAGCCCAGGCCTTTTGATTCTCATGAGTCCTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCTATGATCCTTAAGCCCAGGCCTTTTGATTCTCATGAGTCCTACA  350

seq1  TAGTCACACCTGGAAATCTCTCTGAAGTCTTAATATAGACTCCTAGAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCACACCTGGAAATCTCTCTGAAGTCTTAATATAGACTCCTAGAGCC  400

seq1  ATGCTGAGATTTAATACCCTGTTATTCTAGGAGTGCCTCAGATTTGGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGAGATTTAATACCCTGTTATTCTAGGAGTGCCTCAGATTTGGTCT  450

seq1  CTACCCCGAAGCTATTTCTGACAATTTTTTTTTCCTGAGAGCAAAATAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCCGAAGCTATTTCTGACAATTTTTTTTTCCTGAGAGCAAAATAGT  500

seq1  TTATTTTCAATAGTAAAAGTTTCTAAACTTACATTGAAAAGTTAACTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTCAATAGTAAAAGTTTCTAAACTTACATTGAAAAGTTAACTGTT  550

seq1  GTTGTTTGTAGGTTAAGTTTGGCTTTCTCTTCCTTTATTTTACCTTGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTGTAGGTTAAGTTTGGCTTTCTCTTCCTTTATTTTACCTTGTTT  600

seq1  ACCTAAAATGGAAATGGCTGGCTTTCAGCAACTTACCTGGA  641
      |||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAAAATGGAAATGGCTGGCTTTCAGCAACTTACCTGGA  641


seq1: chr2_16953070_16954123
seq2: B6Ng01-231K05.g_68_1119 (reverse)

seq1  CCCCCTCAACTTCCACTCCACCTTCTTTTTTATCTTCCCACTGATCAGCT  50
      |||| ||||||| |||| ||||||||||||||||||||||||||||||||
seq2  CCCCTTCAACTT-CACT-CACCTTCTTTTTTATCTTCCCACTGATCAGCT  48

seq1  CTCCTTTATTTTACAAATTAAGGTGGGAAGCAGG-TTAACAGGAAATCAC  99
      |||| ||||||||||||||||||||||||||||| |||||||||||||| 
seq2  CTCC-TTATTTTACAAATTAAGGTGGGAAGCAGGTTTAACAGGAAATCA-  96

seq1  CTGACTGCTGACAA-TTGCTTGTTTGCAGCCACTCACAGGAAAATGGAAT  148
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CTGACTGCTGACAATTTGCTTGTTTGCAGCCACTCACAGGAAAATGGAAT  146

seq1  TAACATCAAATATAATTAGCCCCGGGGCTATCCACAACTGAAGAGTTTCC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATCAAATATAATTAGCCCCGGGGCTATCCACAACTGAAGAGTTTCC  196

seq1  CTGTCTCTCTTTAATGGCTTTTGCCTTAATCAACAGAAGCAATAGTCAGT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCTCTTTAATGGCTTTTGCCTTAATCAACAGAAGCAATAGTCAGT  246

seq1  TTATGATGATTGAACCCATCCAAAAGGTTCTAAACTTTATCTCACAGGTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGATGATTGAACCCATCCAAAAGGTTCTAAACTTTATCTCACAGGTC  296

seq1  CCTGAACCAGAAAGGAAGGGGTGTGAGTGTACTGTGGACTAAGAAGGAAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAACCAGAAAGGAAGGGGTGTGAGTGTACTGTGGACTAAGAAGGAAG  346

seq1  AAACGGTGTTATAGGAGAAACACAAGATCAGCCAATTATAGAAATTTTAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGGTGTTATAGGAGAAACACAAGATCAGCCAATTATAGAAATTTTAG  396

seq1  GTAATTATTTTTGGTTAAAAGTTTCTTTTAAGCAGGTTGAGTTTCTATGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTATTTTTGGTTAAAAGTTTCTTTTAAGCAGGTTGAGTTTCTATGC  446

seq1  CAGAAACCAACTACTGTGTTAAGAACTTCTTAGAACTTGGGAGGCAGAGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACCAACTACTGTGTTAAGAACTTCTTAGAACTTGGGAGGCAGAGA  496

seq1  CAGGCAGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAAAGTGAGTTCCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAAAGTGAGTTCCA  546

seq1  GGACAGCCAGGGCTATACAGAGAAACCCTGTCTCGAAAAACAAAACAAGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGCCAGGGCTATACAGAGAAACCCTGTCTCGAAAAACAAAACAAGG  596

seq1  AATTTCTTCACAGGCTTTCAAAAAACAGTAATGAGAATAAAAGACAATAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTTCACAGGCTTTCAAAAAACAGTAATGAGAATAAAAGACAATAG  646

seq1  TTTCCTGGGACAAGAGACAAGAGAGTCTGTGTTGCTAAACCCAAGATATA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGGGACAAGAGACAAGAGAGTCTGTGTTGCTAAACCCAAGATATA  696

seq1  AAACATGCACACACTACTAAAAATGTTTCATATAATATGTAATCCAGTAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGCACACACTACTAAAAATGTTTCATATAATATGTAATCCAGTAA  746

seq1  ATATGAAATCATCATAGACTTGGCCTTGTAGGACTTTATAATGTTTATTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAAATCATCATAGACTTGGCCTTGTAGGACTTTATAATGTTTATTC  796

seq1  ATTCAGTTGCTTAGAAACAACAGGCCTAATCCGGTTTACAATTTTGCTTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTTGCTTAGAAACAACAGGCCTAATCCGGTTTACAATTTTGCTTT  846

seq1  GGCTATTCATCAAATTTTAATTTTAAAATCATGCTTACCTATGAAAGAGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATTCATCAAATTTTAATTTTAAAATCATGCTTACCTATGAAAGAGT  896

seq1  AGACTATGGTCATGTGTATTTGTTGAAAAGTGTTCATTATAATTTCCCTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTATGGTCATGTGTATTTGTTGAAAAGTGTTCATTATAATTTCCCTC  946

seq1  TCTGCAGAACAATCAGGATTTAAATCCTGGCTTTCTGAAACATCCTCTCA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAGAACAATCAGGATTTAAATCCTGGCTTTCTGAAACATCCTCTCA  996

seq1  GGTCTCCAGCCACAAGGATTCCATTAACTGGGATTTCTTTTGTAGCAATT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCCAGCCACAAGGATTCCATTAACTGGGATTTCTTTTGTAGCAATT  1046

seq1  GAATTC  1054
      ||||||
seq2  GAATTC  1052


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