BAC Information

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BAC

Clone NameB6Ng01-231O14
Chromosome2 (Build37)
Map Location 114,178,385 - 114,318,380
singlet/doubletdoublet
Overlap genenone
Upstream geneFmn1, Grem1, LOC100043520, Scg5, Arhgap11a, LOC100043526, Gja9, A530058N18Rik, Actc1, Aqr, Zfp770
Downstream geneAtpbd4, LOC100043219, LOC100043222
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-231O14.bB6Ng01-231O14.g
ACCGA044381GA044382
length1,1541,007
definitionB6Ng01-231O14.b B6Ng01-231O14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,317,227 - 114,318,380)(114,178,385 - 114,179,391)
sequence
gaattcacatgatagattggcccataaaatcttcacgttaggcttgtgca
gctgagttcatgactgaatacagaatgataaagaagtctgagcattttgt
agaaagcaaagaaatcatgccttctagatggcccttaagctagcttttaa
ctgcctggaaatcagctagaaatgtataatcaaacttgccattaaaggca
cagtgtgtagcataaatctttgggacataatctgcaaattaatgcaaagg
ggttctttcacattcatttggttttcattatatttgcatggaagtgtgcc
aatccaaacacatttttttttttttacctttctatccatcagaagttaaa
atagaaatgatggattgtgtcactggccagtccaacagcctgtttctttc
aacgcattactgtgtatttactgttttaggtatattgttttcaatttctg
gcagaatagtcagtttttgatccttggtagaaaatgtcagtgctcacatt
tcctgtggggctttggcctttttgtgaaaaggtagggggagctaaatgaa
ttatgatgctgtcatctgaagaaaccacaatatatttctttgccaaattt
tagcaagaacagggctgatcatctgctcatacaagcctttcgctgaaccc
taccagcagttcgcacaggctgctgcctgttctctttcatgctgggagaa
tgtagtgtgcacatgtccttttaaccttccctttgcaaggttaatggatt
taataacccccaaggaagagatgttttgccacagggacttaggagtctaa
atttatgaatttagaagttcataactgagcttaaataaaactaacaccag
gttgcttcataatgtaagcagggtatggtgaacacacttgtctttctcta
acttctggagaatgagcaccagtctcatcatttttgactcaatattctta
tgttctacacatatttctggcagcatttgttacatctcagcaaagaacag
attctgaatattttgtatagcatgtgagcactacacttatggcagagcac
tatcttaacagtccttagaatagtctagtagcatcagttcataatttatt
ctgatcggcttcacttaccacgaggaggtcttttcttccgcttgtacatt
attt
gaattcactttgattttttgattttttgttgcaataataacatctacaag
gaccctgcagagttaagagagaaagttaagcaccaactgcaggctaatca
ggagaccacacacacacaaacacacactctcgaaaaaaatatatgtataa
tgtctatatagaaaataaatattatttttatatacaaatggttatagatt
ataaaatcattttatttttaaaactattgtcttcttgaaatataaagacc
ctcagagtctggataaaaccagtaactgtttctgtttcagttaaacttgc
ttactatgccgtgcaatatttaatgttcagtaggatgaaagttacagaac
agataaaagattaatgtataaggatcatagcaacacactgattatgatat
aaactaaaagccaatggattctgagatagactaatgcaatttcaaattat
tagactaggacttcatgctttgtgtagttttaagatagtggtgtgtttga
agaaatgtagacatttcaaccaaaatcagggacataaaaaggtgcaatta
gcaacttgtgttgaagtttcccctagacattataatattttcttgggact
aaaagtactcattgtgtgtatcacaatattgttggagaggttactctctg
catgttttacctaggctgaatatccagaatagtttgggagatcctaactt
actttcaaaagtgaatatacactgtagaaccaacttacagggttgcttac
aaattagaatgcaacaaaagacaaatggaaaaattgattaatttatgtgc
ttctccttaaaactcagtacctgactctccaaactgatgccttatgtttg
ttaaatgtgcagatttaggttttgctatgggttcatgaagccacgtctga
tggtgggacacatttggaaggatgcattttacagcactccagatgaacta
gcctataactaagggaaagagaaaagaaaatgtacagttatgggggggtg
ggggaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_114317227_114318380
seq2: B6Ng01-231O14.b_42_1195 (reverse)

seq1  AAATAATGTAACCAGCCGAAGAAAAGACACTTCCTCGTGGGTTAGTGAAG  50
      ||||||||| || ||| |||||||||  || ||||||| ||| |||||||
seq2  AAATAATGT-ACAAGCGGAAGAAAAG--ACCTCCTCGT-GGTAAGTGAAG  46

seq1  GCGATCAG-ATAA--TATGAACTGATGCTTACTAAGGACTA-TCTAAGGA  96
       ||||||| ||||  ||||||||||||| |||||  ||||| ||||||||
seq2  CCGATCAGAATAAATTATGAACTGATGC-TACTA--GACTATTCTAAGGA  93

seq1  CTGT--AGATAGTGCTCTGCCATAAGTGTAGTGCTCACATGCTATAC-AA  143
      ||||  ||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTGTTAAGATAGTGCTCTGCCATAAGTGTAGTGCTCACATGCTATACAAA  143

seq1  ATATTCAGAATCTGTTCTTTGCTGAGATGT-ACAAATGCTGCCAGAAAAT  192
      |||||||||||||||||||||||||||||| |||||||||||||| ||||
seq2  ATATTCAGAATCTGTTCTTTGCTGAGATGTAACAAATGCTGCCAG-AAAT  192

seq1  ATGTGTAGAACATAAGAATATTGAGTCAAAAATGATGAGACTGGTGCTCA  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTAGAACATAAGAATATTGAGTCAAAAATGATGAGACTGGTGCTCA  242

seq1  TTCTCCAGAAGTTAGAGAAAGACAAGTGTGTTCACCATACCCTGCTTACA  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCAGAAGTTAGAGAAAGACAAGTGTGTTCACCATACCCTGCTTACA  292

seq1  TTATGAAGCAACCTGGTGTTAGTTTTATTTAAGCTCAGTTATGAACTTCT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAAGCAACCTGGTGTTAGTTTTATTTAAGCTCAGTTATGAACTTCT  342

seq1  AAATTCATAAATTTAGACTCCTAAGTCCCTGTGGCAAAACATCTCTTCCT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCATAAATTTAGACTCCTAAGTCCCTGTGGCAAAACATCTCTTCCT  392

seq1  TGGGGGTTATTAAATCCATTAACCTTGCAAAGGGAAGGTTAAAAGGACAT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGTTATTAAATCCATTAACCTTGCAAAGGGAAGGTTAAAAGGACAT  442

seq1  GTGCACACTACATTCTCCCAGCATGAAAGAGAACAGGCAGCAGCCTGTGC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACACTACATTCTCCCAGCATGAAAGAGAACAGGCAGCAGCCTGTGC  492

seq1  GAACTGCTGGTAGGGTTCAGCGAAAGGCTTGTATGAGCAGATGATCAGCC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGCTGGTAGGGTTCAGCGAAAGGCTTGTATGAGCAGATGATCAGCC  542

seq1  CTGTTCTTGCTAAAATTTGGCAAAGAAATATATTGTGGTTTCTTCAGATG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCTTGCTAAAATTTGGCAAAGAAATATATTGTGGTTTCTTCAGATG  592

seq1  ACAGCATCATAATTCATTTAGCTCCCCCTACCTTTTCACAAAAAGGCCAA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCATCATAATTCATTTAGCTCCCCCTACCTTTTCACAAAAAGGCCAA  642

seq1  AGCCCCACAGGAAATGTGAGCACTGACATTTTCTACCAAGGATCAAAAAC  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCACAGGAAATGTGAGCACTGACATTTTCTACCAAGGATCAAAAAC  692

seq1  TGACTATTCTGCCAGAAATTGAAAACAATATACCTAAAACAGTAAATACA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTATTCTGCCAGAAATTGAAAACAATATACCTAAAACAGTAAATACA  742

seq1  CAGTAATGCGTTGAAAGAAACAGGCTGTTGGACTGGCCAGTGACACAATC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAATGCGTTGAAAGAAACAGGCTGTTGGACTGGCCAGTGACACAATC  792

seq1  CATCATTTCTATTTTAACTTCTGATGGATAGAAAGGTAAAAAAAAAAAAA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATTTCTATTTTAACTTCTGATGGATAGAAAGGTAAAAAAAAAAAAA  842

seq1  TGTGTTTGGATTGGCACACTTCCATGCAAATATAATGAAAACCAAATGAA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTGGATTGGCACACTTCCATGCAAATATAATGAAAACCAAATGAA  892

seq1  TGTGAAAGAACCCCTTTGCATTAATTTGCAGATTATGTCCCAAAGATTTA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAAGAACCCCTTTGCATTAATTTGCAGATTATGTCCCAAAGATTTA  942

seq1  TGCTACACACTGTGCCTTTAATGGCAAGTTTGATTATACATTTCTAGCTG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACACACTGTGCCTTTAATGGCAAGTTTGATTATACATTTCTAGCTG  992

seq1  ATTTCCAGGCAGTTAAAAGCTAGCTTAAGGGCCATCTAGAAGGCATGATT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCAGGCAGTTAAAAGCTAGCTTAAGGGCCATCTAGAAGGCATGATT  1042

seq1  TCTTTGCTTTCTACAAAATGCTCAGACTTCTTTATCATTCTGTATTCAGT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCTTTCTACAAAATGCTCAGACTTCTTTATCATTCTGTATTCAGT  1092

seq1  CATGAACTCAGCTGCACAAGCCTAACGTGAAGATTTTATGGGCCAATCTA  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAACTCAGCTGCACAAGCCTAACGTGAAGATTTTATGGGCCAATCTA  1142

seq1  TCATGTGAATTC  1154
      ||||||||||||
seq2  TCATGTGAATTC  1154

seq1: chr2_114178385_114179391
seq2: B6Ng01-231O14.g_67_1073

seq1  GAATTCACTTTGATTTTTTGATTTTTTGTTGCAATAATAACATCTACAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGATTTTTTGATTTTTTGTTGCAATAATAACATCTACAAG  50

seq1  GACCCTGCAGAGTTAAGAGAGAAAGTTAAGCACCAACTGCAGGCTAATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTGCAGAGTTAAGAGAGAAAGTTAAGCACCAACTGCAGGCTAATCA  100

seq1  GGAGACCACACACACACAAACACACACTCTCGAAAAAAATATATGTATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACCACACACACACAAACACACACTCTCGAAAAAAATATATGTATAA  150

seq1  TGTCTATATAGAAAATAAATATTATTTTTATATACAAATGGTTATAGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTATATAGAAAATAAATATTATTTTTATATACAAATGGTTATAGATT  200

seq1  ATAAAATCATTTTATTTTTAAAACTATTGTCTTCTTGAAATATAAAGACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATCATTTTATTTTTAAAACTATTGTCTTCTTGAAATATAAAGACC  250

seq1  CTCAGAGTCTGGATAAAACCAGTAACTGTTTCTGTTTCAGTTAAACTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAGTCTGGATAAAACCAGTAACTGTTTCTGTTTCAGTTAAACTTGC  300

seq1  TTACTATGCCGTGCAATATTTAATGTTCAGTAGGATGAAAGTTACAGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTATGCCGTGCAATATTTAATGTTCAGTAGGATGAAAGTTACAGAAC  350

seq1  AGATAAAAGATTAATGTATAAGGATCATAGCAACACACTGATTATGATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAAAGATTAATGTATAAGGATCATAGCAACACACTGATTATGATAT  400

seq1  AAACTAAAAGCCAATGGATTCTGAGATAGACTAATGCAATTTCAAATTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAAAAGCCAATGGATTCTGAGATAGACTAATGCAATTTCAAATTAT  450

seq1  TAGACTAGGACTTCATGCTTTGTGTAGTTTTAAGATAGTGGTGTGTTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTAGGACTTCATGCTTTGTGTAGTTTTAAGATAGTGGTGTGTTTGA  500

seq1  AGAAATGTAGACATTTCAACCAAAATCAGGGACATAAAAAGGTGCAATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGTAGACATTTCAACCAAAATCAGGGACATAAAAAGGTGCAATTA  550

seq1  GCAACTTGTGTTGAAGTTTCCCCTAGACATTATAATATTTTCTTGGGACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTTGTGTTGAAGTTTCCCCTAGACATTATAATATTTTCTTGGGACT  600

seq1  AAAAGTACTCATTGTGTGTATCACAATATTGTTGGAGAGGTTACTCTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTACTCATTGTGTGTATCACAATATTGTTGGAGAGGTTACTCTCTG  650

seq1  CATGTTTTACCTAGGCTGAATATCCAGAATAGTTTGGGAGATCCTAACTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTTACCTAGGCTGAATATCCAGAATAGTTTGGGAGATCCTAACTT  700

seq1  ACTTTCAAAAGTGAATATACACTGTAGAACCAACTTACAGGGTTGCTTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCAAAAGTGAATATACACTGTAGAACCAACTTACAGGGTTGCTTAC  750

seq1  AAATTAGAATGCAAC-AAAGACAAATGGAAAAATTGATTAATTTATGTGC  799
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AAATTAGAATGCAACAAAAGACAAATGGAAAAATTGATTAATTTATGTGC  800

seq1  TTCTCCTTAAAACTCAGTACCTGACTCTCCAAACTGATGCCTTATGTTTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTTAAAACTCAGTACCTGACTCTCCAAACTGATGCCTTATGTTTG  850

seq1  TTAAATGTGCAGATTTAGGTTTTGCTATGGGTTCATGAAGCCACGTCTGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGTGCAGATTTAGGTTTTGCTATGGGTTCATGAAGCCACGTCTGA  900

seq1  TGGGTGGGACACATTTGGAAGGATGCATTTTACAGCACTCCAGATGAACT  949
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  T-GGTGGGACACATTTGGAAGGATGCATTTTACAGCACTCCAGATGAACT  949

seq1  AGCCTAATAACTAAGGGAAAGAGAAAAGAAAATGTACAGTTAT-GGGGGG  998
      ||||| ||||||||||||||||||||||||||||||||||||| ||||||
seq2  AGCCT-ATAACTAAGGGAAAGAGAAAAGAAAATGTACAGTTATGGGGGGG  998

seq1  TGGGGGAGG  1007
      ||||||| |
seq2  TGGGGGAAG  1007