BAC Information

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BAC

Clone NameB6Ng01-232A18
Chromosome2 (Build37)
Map Location 44,844,733 - 44,951,840
singlet/doubletdoublet
Overlap geneZeb2
Upstream geneArhgap15, Gtdc1
Downstream geneLOC100042661, LOC100041337, LOC666604
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232A18.bB6Ng01-232A18.g
ACCGA044481GA044482
length7581,173
definitionB6Ng01-232A18.b B6Ng01-232A18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(44,951,087 - 44,951,840)(44,844,733 - 44,845,915)
sequence
gaattctatagttgcaaaacttgttttcacaatgaaaataaatataaaat
tttttttctatctttggcagagtacgtgtttttctgctttatgtctataa
aacagatgcacgtttccccattcttctctacagttttaaactttggagaa
gggcggcgggaggggggatgggggaagcctggtgtctttaccagatgatt
taaaatcctcttctctttccagctagacttgggggtcgaataaacccttg
ctttcaagcagtcttcaagctccgtgtatgacaggcattggctgatctgt
tgatgcccattcgacaggcactgttgaactaaagtggtgtgacggcacag
ttttgttaagctgtgaacaaaggttggagatgccttactggcgtcacccg
tgtgcatattggccttgtcacagtgtgcttgatttaatgctctgtttatt
cctagatattaaaacctaaattctgaacaataagtttttcaaatgctact
acataccaactttattttaaaaagctttaactttgaagaccccagggtcc
atttgctcctccagcccccccacccccaccccccaatgcaaccagtatta
gaacatagctctggaaaagaaatgtactcccagtaccttcttagttctta
cccatttaaaaatggggatttcagtcttttaaaagccttattagagtaaa
aagatttttttccttctttgatcatttggctgaaatgattatttattttc
aacagtgg
gaattctgtcatcgtgtcccgactcaggcatgagcatgtctgcttatgtc
tgaaagatcgacacacttcggtctaacccaagtcggttaggaaggtccat
tttcatctcataatctggttttctaccgattactaacgaatgtgattggt
taaccagatggctgctgaaggggaactcaaaatggaggctttgtcactgt
ctcaaacggaaaaacgtcctgggaaacaagacatttttagtggcctacaa
cattttaccgccagacaattcttctcatccttacggtgttttgttttgtt
ttgttttgtcttgttttgttttgttttgttttgttttaaggcaagaactt
gagtgagagcaatagaaatggtatcatcactggttttgtatggtccatca
tgagctagctgctttgaaagtgggcctagtctcaaacaggagcaaactgc
tacgttatgaaagaacagactggaggcaagaagatgctaagagtgtctga
tcagtcattggattctaagagtaaaacttagggaagaaaccatctgaaat
gcaaactagaaagatgtgtttcataggatctgaactagctgcaaatggtg
tttccccccccccctccccgctagagttttccatgggatgccagccactt
gttgcgtgttaaaatactcctgagctagagaacctagcgcttcctttccc
attccaggcagtttctaaccagtgtttggaacttgaaaccactgccaagc
ctaaacacatctggttgattccaggccacaaatagcactggaatgccttc
aacaccttttggagctgtcatacttaaaactttatttccaaaatagaact
gacaaatagagagatagatcagcctgatgcgccagagttaaaaatcaatg
tgtggcgcggagcatgaggtatcatcatatcgtacatgaagctaggtgat
tctacttcccctacaaaactcctgtttcagcaaattaaataaaacacggg
caatagtagagtcaactccgtttcattgctaagtgtcatgttatagatag
aactcattctggacacttcagtttcagttatagggtgaatatacaattcc
caatagtatcaaatatctttaataatgttattgaatggctcagggcaatg
ccactactaagaaacgctgcaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_44951087_44951840
seq2: B6Ng01-232A18.b_44_800 (reverse)

seq1  CACTGTTGGAAATAAATAATCACTTTCAGCC-AATGATCAAAGAA-GAAA  48
      |||||||| ||||||||||||| |||||||| ||||||||||||| ||||
seq2  CACTGTTGAAAATAAATAATCA-TTTCAGCCAAATGATCAAAGAAGGAAA  49

seq1  TAAATC-TTTTACTCTAATAAGGCTTTTTAAAGGCTGAAAT-CCCATTTT  96
       ||||| ||||||||||||||||||||| |||| ||||||| ||||||||
seq2  AAAATCTTTTTACTCTAATAAGGCTTTTAAAAGACTGAAATCCCCATTTT  99

seq1  TAAATGGGTAAGAGCTAAGAAGGTACTGGGAGTCCGTTTCTTTTCCAGAG  146
      ||||||||||||| ||||||||||||||||||| | ||||||||||||||
seq2  TAAATGGGTAAGAACTAAGAAGGTACTGGGAGTACATTTCTTTTCCAGAG  149

seq1  CTATGTTCTAATACTGGTTGCATTGGGGGGTGGGGGTGGGGGGGCTGGAG  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTTCTAATACTGGTTGCATTGGGGGGTGGGGGTGGGGGGGCTGGAG  199

seq1  GAGCAAATGGACCCTGGGGTCTTCAAAGTTAAAGCTTTTTAAAATAAAGT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAATGGACCCTGGGGTCTTCAAAGTTAAAGCTTTTTAAAATAAAGT  249

seq1  TGGTATGTAGTAGCATTTGAAAAACTTATTGTTCAGAATTTAGGTTTTAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATGTAGTAGCATTTGAAAAACTTATTGTTCAGAATTTAGGTTTTAA  299

seq1  TATCTAGGAATAAACAGAGCATTAAATCAAGCACACTGTGACAAGGCCAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAGGAATAAACAGAGCATTAAATCAAGCACACTGTGACAAGGCCAA  349

seq1  TATGCACACGGGTGACGCCAGTAAGGCATCTCCAACCTTTGTTCACAGCT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCACACGGGTGACGCCAGTAAGGCATCTCCAACCTTTGTTCACAGCT  399

seq1  TAACAAAACTGTGCCGTCACACCACTTTAGTTCAACAGTGCCTGTCGAAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAAACTGTGCCGTCACACCACTTTAGTTCAACAGTGCCTGTCGAAT  449

seq1  GGGCATCAACAGATCAGCCAATGCCTGTCATACACGGAGCTTGAAGACTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATCAACAGATCAGCCAATGCCTGTCATACACGGAGCTTGAAGACTG  499

seq1  CTTGAAAGCAAGGGTTTATTCGACCCCCAAGTCTAGCTGGAAAGAGAAGA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAAGCAAGGGTTTATTCGACCCCCAAGTCTAGCTGGAAAGAGAAGA  549

seq1  GGATTTTAAATCATCTGGTAAAGACACCAGGCTTCCCCCATCCCCCCTCC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTTAAATCATCTGGTAAAGACACCAGGCTTCCCCCATCCCCCCTCC  599

seq1  CGCCGCCCTTCTCCAAAGTTTAAAACTGTAGAGAAGAATGGGGAAACGTG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCGCCCTTCTCCAAAGTTTAAAACTGTAGAGAAGAATGGGGAAACGTG  649

seq1  CATCTGTTTTATAGACATAAAGCAGAAAAACACGTACTCTGCCAAAGATA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGTTTTATAGACATAAAGCAGAAAAACACGTACTCTGCCAAAGATA  699

seq1  GAAAAAAAATTTTATATTTATTTTCATTGTGAAAACAAGTTTTGCAACTA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAATTTTATATTTATTTTCATTGTGAAAACAAGTTTTGCAACTA  749

seq1  TAGAATTC  754
      ||||||||
seq2  TAGAATTC  757

seq1: chr2_44844733_44845915
seq2: B6Ng01-232A18.g_66_1238

seq1  GAATTCTGTCATCGTGTCCCGACTCAGGCATGAGCATGTCTGCTTATGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCATCGTGTCCCGACTCAGGCATGAGCATGTCTGCTTATGTC  50

seq1  TGAAAGATCGACACACTTCGGTCTAACCCAAGTCGGTTAGGAAGGTCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGATCGACACACTTCGGTCTAACCCAAGTCGGTTAGGAAGGTCCAT  100

seq1  TTTCATCTCATAATCTGGTTTTCTACCGATTACTAACGAATGTGATTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATCTCATAATCTGGTTTTCTACCGATTACTAACGAATGTGATTGGT  150

seq1  TAACCAGATGGCTGCTGAAGGGGAACTCAAAATGGAGGCTTTGTCACTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAGATGGCTGCTGAAGGGGAACTCAAAATGGAGGCTTTGTCACTGT  200

seq1  CTCAAACGGAAAAACGTCCTGGGAAACAAGACATTTTTAGTGGCCTACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAACGGAAAAACGTCCTGGGAAACAAGACATTTTTAGTGGCCTACAA  250

seq1  CATTTTACCGCCAGACAATTCTTCTCATCCTTACGGTGTTTTGTTTTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTACCGCCAGACAATTCTTCTCATCCTTACGGTGTTTTGTTTTGTT  300

seq1  TTGTTTTGTCTTGTTTTGTTTTGTTTTGTTTTGTTTTAAGGCAAGAACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGTCTTGTTTTGTTTTGTTTTGTTTTGTTTTAAGGCAAGAACTT  350

seq1  GAGTGAGAGCAATAGAAATGGTATCATCACTGGTTTTGTATGGTCCATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAGAGCAATAGAAATGGTATCATCACTGGTTTTGTATGGTCCATCA  400

seq1  TGAGCTAGCTGCTTTGAAAGTGGGCCTAGTCTCAAACAGGAGCAAACTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTAGCTGCTTTGAAAGTGGGCCTAGTCTCAAACAGGAGCAAACTGC  450

seq1  TACGTTATGAAAGAACAGACTGGAGGCAAGAAGATGCTAAGAGTGTCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGTTATGAAAGAACAGACTGGAGGCAAGAAGATGCTAAGAGTGTCTGA  500

seq1  TCAGTCATTGGATTCTAAGAGTAAAACTTAGGGAAGAAACCATCTGAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCATTGGATTCTAAGAGTAAAACTTAGGGAAGAAACCATCTGAAAT  550

seq1  GCAAACTAGAAAGATGTGTTTCATAGGATCTGAACTAGCTGCAAATGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACTAGAAAGATGTGTTTCATAGGATCTGAACTAGCTGCAAATGGTG  600

seq1  TTTCCCCCCCCCCCTCCCCGCTAGAGTTTTCCATGGGATGCCAGCCACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCCCCCCCCTCCCCGCTAGAGTTTTCCATGGGATGCCAGCCACTT  650

seq1  GTTGCGTGTTAAAATACTCCTGAGCTAGAGAACCTAGCGCTTCCTTTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCGTGTTAAAATACTCCTGAGCTAGAGAACCTAGCGCTTCCTTTCCC  700

seq1  ATTCCAGGCAGTTTCTAACCAGTGTTTGGAACTTGAAACCACTGCCAAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAGGCAGTTTCTAACCAGTGTTTGGAACTTGAAACCACTGCCAAGC  750

seq1  CTAAACACATCTGGTTGATTCCAGGCCACAAATAGCACTGGAATGCCTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACACATCTGGTTGATTCCAGGCCACAAATAGCACTGGAATGCCTTC  800

seq1  AACACCTTTTGGAGCTGTCATACTTAAAACTTTATTTCCAAAATAGAACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCTTTTGGAGCTGTCATACTTAAAACTTTATTTCCAAAATAGAACT  850

seq1  GACAAATAGAGAGATAGATCAGCCTGATGCGCCAGAGTTAAAAATCAATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAATAGAGAGATAGATCAGCCTGATGCGCCAGAGTTAAAAATCAATG  900

seq1  TGTGGCGCGGAGCATGAGGTATCATCATATCGTACATGAAGCTAGGTGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCGCGGAGCATGAGGTATCATCATATCGTACATGAAGCTAGGTGAT  950

seq1  TCTACTTCCCCTAC-AAACTCCTGTTTCAGCAAATTAAATTAAAACACCG  999
      |||||||||||||| |||||||||||||||||||||||| |||||||| |
seq2  TCTACTTCCCCTACAAAACTCCTGTTTCAGCAAATTAAA-TAAAACACGG  999

seq1  GCATTAGTAGAGGCCAACCCCGTTTTCATTTGCTAAGTGTCATGTTATAA  1049
      ||| ||||||| | |||| ||| ||||| ||||||||||||||||||| |
seq2  GCAATAGTAGA-GTCAACTCCG-TTTCA-TTGCTAAGTGTCATGTTAT-A  1045

seq1  GATTAGGAACCCATTCTGGACACTTCAGGTTTTCAGTTATAGGGTG-ATA  1098
      |||   |||| |||||||||||||||||  |||||||||||||||| |||
seq2  GAT--AGAACTCATTCTGGACACTTCAG--TTTCAGTTATAGGGTGAATA  1091

seq1  TACAATCCCAATTAGTAATCAAATATCTTTAATAATGTTATTGAATGCCT  1148
      |||||| || | |||| |||||||||||||||||||||||||||||| ||
seq2  TACAATTCCCAATAGT-ATCAAATATCTTTAATAATGTTATTGAATGGCT  1140

seq1  CCAGGGCATTGCCACTACTTAGAAAACGCTGCAGA  1183
       ||||||| |||||||||| || ||||||||||||
seq2  -CAGGGCAATGCCACTACTAAG-AAACGCTGCAGA  1173