BAC Information

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BAC

Clone NameB6Ng01-232A20
Chromosome2 (Build37)
Map Location 108,416,771 - 108,417,925
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043078, LOC668790
Downstream geneLOC623003, LOC100043423, LOC623031, Mett5d1, Kif18a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232A20.bB6Ng01-232A20.g
ACCGA044485GA044486
length1,1551,173
definitionB6Ng01-232A20.b B6Ng01-232A20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttatccctgccttcactctggttttctccctcactgtagtcac
tgtacagccaagaataagacatttatgatcacactgacttcttggccttt
tagtgtctctgttctcttccactcttcctccaggatctcttgtacatagc
ttcagcctttttctttttacactgctcttctgcctcagctccacccacag
acactcttagatgatctgcctacattcctgcatgttagttcatcacttac
ctttgagaaagcacatgttacatcataattaagtctcatctaacctttct
cccactttagtgaattttttaatttaaaagttttaccatcatattgtaga
aaaattggaaaatacttccatattataaaggggaagaattccatatgtgc
tttttaaaatatttagtcacccacccagaataagaataactgcagttcat
atttaaaagttaagttgacgtgtatctctgggaagtttggtgtcttcttt
ctaaagctctgttttacttttccctgatgtttctaagattacttctgtaa
ctactgtgagtcaaaactctttgtaatgttttctaatttatctttgttgt
tttacataggaatgtaaataaccattaatttaaaattttcttcctaactc
tcaccaaattcaggaagctttagtttatcttcttggaatttctgggaaca
taataagatagttcttaaataataattccataccctttccctttttaaac
atttcattagatttcaatggatcttccaggaaaatgctaactaatattgg
aaatagcctacgtcattgtgctgtttttgatactgctaagaatgactcca
gggcttcggtgttatactaagcatggcattgcaatactgcattcacaagt
gttcatggctttctagagttttaattgaggaactttaaaactacacaatt
attttttatcaaattcaatttgtcatttaaaggaatcttagacttcttta
tattccagtgtaaaatggttttgtttctccatctatcttggcatgattta
aatactttaatagtataatatgaagtttgttggctcatgatagcttggcc
taatagaatgcaaatctagtactgcttcaatgccgaataactgaattctc
tattt

gaattctgtttagctctataccccattatttttattgttttttttttggt
tatcttttagaggttagtttcctgtgttctttatatattttatatactga
ccctgtatcagttgtggggttagtgaacagtttttccaattcataggttg
gtgatttgtcttattgactatttcccatgctttacagatgcttttcaatt
tcattttcataaggtaccacctgtcagttcttcatcttagaacctaagcc
attgaaattctgtttaggaaaatttcccccttgtcaatgagtttgaagtt
ctttcctcctttctctcctattagattcagtgtgtctggttttatgttga
tgagcacttggactagagctttgtgcaatgtgacaaatatggatctactt
tcaattttctacataccaactgccagttagtccagcactaactttctttt
ttcttttcattgtatatttttggctcatttgtcaaagatcaagtatccat
aagtgagtggttttatttccaggtcttcaattctattccattgatcaatg
tgtctttctctgtaccaataccatacagtttttatcattgttgctctgta
gtaaagcttgaggtcagagatcatgatttacccagttttttttattatta
agaattgttttcaatattcagggatttttatttttccatatgacattgag
aattgttcttttcatgtctttgaagaattgtgttggaatcttgatgggga
ttgcattgagtctgtagactgctttcagtaagatgggcatttttactatg
ttgattctaccaatccatgaggaaggaaaatctctccattttctgagatc
tttcttcgatttctttcttgaaaggccacaaccaaaagcagcatgggcat
aataatttatgaagttgcagtagtatcacatatgacttagttgaacttaa
aaactcacttaacaagaggaaatcatgcaagtattggaaactagccagtt
accaggctagtgaagtatggataacccacaggcactttactaaatgagtc
taaactagccttaacttattcttatccaattgtccctatacttacagtgc
catgcaccacctctcaacgaaacatgtcttgaacgacaagtacatagaaa
tgtaatcctaatcacatatgccg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_108416771_108417925
seq2: B6Ng01-232A20.b_44_1198 (reverse)

seq1  AAATAGAGAAATCAGTAATATTGGCATTGAGGCAGTACCAGATTTGCA-T  49
      |||||||||| ||||| || | |||||||| ||||||| ||||||||| |
seq2  AAATAGAGAATTCAGTTAT-TCGGCATTGAAGCAGTACTAGATTTGCATT  49

seq1  CTATTA-GCAAAGCTTATCAATGAGCCACCAACCTTCATATTATTACTAT  98
      |||||| || |||| |||| |||||||| ||| |||||||||| ||||||
seq2  CTATTAGGCCAAGC-TATC-ATGAGCCAACAAACTTCATATTA-TACTAT  96

seq1  TAAAGTATTTAAATCATGCCAAGAATAGATGGAG-AACAAAACCATTTTA  147
      ||||||||||||||||||||||| |||||||||| |||||||||||||||
seq2  TAAAGTATTTAAATCATGCCAAG-ATAGATGGAGAAACAAAACCATTTTA  145

seq1  CACTGGGAAATATAAAG-AGTCT-AGATTTCCTTTAATGACAAATTGAAT  195
      ||||||  ||||||||| ||||| ||||| | || |||||||||||||||
seq2  CACTGG--AATATAAAGAAGTCTAAGATTCCTTTAAATGACAAATTGAAT  193

seq1  TTGAT-AAAAATAATTGTGTAGTTTT-AAGTTCCTCAATTAAAACTCTAG  243
      ||||| |||||||||||||||||||| |||||||||||||||||||||||
seq2  TTGATAAAAAATAATTGTGTAGTTTTAAAGTTCCTCAATTAAAACTCTAG  243

seq1  AAAGCCATGAACACTTGTGAATGCAGTATTGCAATGCCATGCTTAGTATA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCATGAACACTTGTGAATGCAGTATTGCAATGCCATGCTTAGTATA  293

seq1  ACACCGAAGCCCTGGAGTCATTCTTAGCAGTATCAAAAACAGCACAATGA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCGAAGCCCTGGAGTCATTCTTAGCAGTATCAAAAACAGCACAATGA  343

seq1  CGTAGGCTATTTCCAATATTAGTTAGCATTTTCCTGGAAGATCCATTGAA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGGCTATTTCCAATATTAGTTAGCATTTTCCTGGAAGATCCATTGAA  393

seq1  ATCTAATGAAATGTTTAAAAAGGGAAAGGGTATGGAATTATTATTTAAGA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAATGAAATGTTTAAAAAGGGAAAGGGTATGGAATTATTATTTAAGA  443

seq1  ACTATCTTATTATGTTCCCAGAAATTCCAAGAAGATAAACTAAAGCTTCC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCTTATTATGTTCCCAGAAATTCCAAGAAGATAAACTAAAGCTTCC  493

seq1  TGAATTTGGTGAGAGTTAGGAAGAAAATTTTAAATTAATGGTTATTTACA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTGGTGAGAGTTAGGAAGAAAATTTTAAATTAATGGTTATTTACA  543

seq1  TTCCTATGTAAAACAACAAAGATAAATTAGAAAACATTACAAAGAGTTTT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTATGTAAAACAACAAAGATAAATTAGAAAACATTACAAAGAGTTTT  593

seq1  GACTCACAGTAGTTACAGAAGTAATCTTAGAAACATCAGGGAAAAGTAAA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCACAGTAGTTACAGAAGTAATCTTAGAAACATCAGGGAAAAGTAAA  643

seq1  ACAGAGCTTTAGAAAGAAGACACCAAACTTCCCAGAGATACACGTCAACT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCTTTAGAAAGAAGACACCAAACTTCCCAGAGATACACGTCAACT  693

seq1  TAACTTTTAAATATGAACTGCAGTTATTCTTATTCTGGGTGGGTGACTAA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTTAAATATGAACTGCAGTTATTCTTATTCTGGGTGGGTGACTAA  743

seq1  ATATTTTAAAAAGCACATATGGAATTCTTCCCCTTTATAATATGGAAGTA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTAAAAAGCACATATGGAATTCTTCCCCTTTATAATATGGAAGTA  793

seq1  TTTTCCAATTTTTCTACAATATGATGGTAAAACTTTTAAATTAAAAAATT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCAATTTTTCTACAATATGATGGTAAAACTTTTAAATTAAAAAATT  843

seq1  CACTAAAGTGGGAGAAAGGTTAGATGAGACTTAATTATGATGTAACATGT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAAGTGGGAGAAAGGTTAGATGAGACTTAATTATGATGTAACATGT  893

seq1  GCTTTCTCAAAGGTAAGTGATGAACTAACATGCAGGAATGTAGGCAGATC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCTCAAAGGTAAGTGATGAACTAACATGCAGGAATGTAGGCAGATC  943

seq1  ATCTAAGAGTGTCTGTGGGTGGAGCTGAGGCAGAAGAGCAGTGTAAAAAG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAGAGTGTCTGTGGGTGGAGCTGAGGCAGAAGAGCAGTGTAAAAAG  993

seq1  AAAAAGGCTGAAGCTATGTACAAGAGATCCTGGAGGAAGAGTGGAAGAGA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGCTGAAGCTATGTACAAGAGATCCTGGAGGAAGAGTGGAAGAGA  1043

seq1  ACAGAGACACTAAAAGGCCAAGAAGTCAGTGTGATCATAAATGTCTTATT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGACACTAAAAGGCCAAGAAGTCAGTGTGATCATAAATGTCTTATT  1093

seq1  CTTGGCTGTACAGTGACTACAGTGAGGGAGAAAACCAGAGTGAAGGCAGG  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTGTACAGTGACTACAGTGAGGGAGAAAACCAGAGTGAAGGCAGG  1143

seq1  GATAAGGAATTC  1155
      ||||||||||||
seq2  GATAAGGAATTC  1155


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