BAC Information

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BAC

Clone NameB6Ng01-232B13
Chromosome2 (Build37)
Map Location 76,489,892 - 76,602,814
singlet/doubletdoublet
Overlap geneDfnb59, Fkbp7, Plekha3, Ttn
Upstream geneLOC667828, Hnrpa3, Nfe2l2, E030042O20Rik, LOC623453, Agps, Ttc30b, Ttc30a2, Ttc30a1, Pde11a, Cyct, Drbp1, Osbpl6, Prkra
Downstream gene2610301F02Rik, Sestd1, LOC623706, LOC667906, Zfp533
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232B13.bB6Ng01-232B13.g
ACCGA044517GA044518
length1,1181,211
definitionB6Ng01-232B13.b B6Ng01-232B13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,489,892 - 76,491,019)(76,601,625 - 76,602,814)
sequence
gaattcaactccatcttgggcaaattattgagaatctgtctcaaactaaa
atcaaaatcactgggtggcagggaggtggctcagtgatagagtgcttgcc
cagcgtgcacaaggctctgggttcagtccccggtcctagaaaactaaaca
agtcgtgcctccactctatagagcaagaaaaacaactgaagagagaggca
aattagtcaagtgattttgtttctattttctgattttcattattcctacc
tcagattcacacacgtcattaagatgggccttaaataacacaaaaaggta
ccttcagtcacatgatcacatattagagcatcttagacacatgtcttttt
ttattctagaaaaattaactttgaccacagtttgatccgccaatcaagga
gcagcaggaaggcggtgctgtgcgtggtcatggagagcatccgaaccaca
cgccagtgctctctgtcagtgcacgctgggattcgtggggaagccatgcg
ggtaagatacactcagggcttcactaacgacacagttactatggagttta
aaaaaaaattactcatcaaaggcagaaaaaaaaaaaaaaaaaaagagcct
cagttttgtagggcttcagtccggagtggctgtgctttggaataagaaaa
ccaaccaaaaccacttgggttctaaccctgtgtgctacggtacaaacaat
atattactggagtctctccaattaactactacctcagtgttagagtaacc
acataaagtaagccttgatgtcgtatgctttgacatttatttatttattt
atttatttattgttttttgagaaagggtttctctgtgtagccctaggctt
atcctgggaacttgctctgtagaccaggctggcctcaaactcagaaattc
gcctgcctctgcctctcaagtgctgggattaaaggcatgtacaccacatt
gcctcaagttttatttcatttttagaaaatctattcatactgatttttaa
agttgagtttagctattctttttgtacttattatttagtgctctgggtgt
gtgtgtgtagcgttcacatgcacagtgtgcatgtggagtcaagacaattg
tgggactcaggttttctc
gaattcacagtcaccagctaaggatgagaaccaggagtacgagttcaggg
tgtgtgcccagaatcaagttggcattgggcgccctgcagagctaaaggaa
gccatcaaacctaaagaaatcctaggtgaggcccttttgtggtggtagat
agtcatctgcatgcattctcacggtcatgggcttcctcgtgtctcaagag
tcggctgatgtcttttgtgtcgtttgcagagcctccagagattgacttgg
atgccagcatgagaaaactggtcgtagtgagagctggctgccctattcga
ctattcgcaatagtgagaggacgacctgcccccaaagtcacatggcgcaa
agtgggcattgataatgtggtcagaaaaggacaagtcgatctagttgaca
ctatggccttccttgtcatccccaactctacccgtgatgactctggaaaa
tactccctgacccttgtgaacccagcaggagaaaaggctgtttttgtgaa
tgtcaaagtactaggtgcgttatccaagtgcttttttttttctgcttcaa
aatcaaataagttaataagaatgcttatgggacatatgttctgagtctgt
ggatctttacagatactcctggacctgtggctgatttaaaagtttcagat
gtcactaaaacatcatgtcacgtgtcctgggcacctcctgaaaatgatgg
tggaagccaagtgacacattatattgtggagaaacgtgaggcagaaagaa
aaacatggtcaacagttacccctgaagtgaagaaaacaagcttcaatgta
accaaccttgtccctgggaacgagtatttcttccgagtaacctgctgtca
atgaatatggccctggtgtcccgacagacatccccaaacctgtgcttgca
tcagatcctctcagtaagcattctccgttctttttcccttttgattgcag
ccctctagtttactaaggtcatgagatcagtatgattattaatccacgga
agggacttgaattgtgaaatctgaactcaagagttaccgtgatatctctc
ctccgaacaaaacttattagttttcttcatcttatactttcatttttcac
atgttgaactaaacatccataatacttgggtgccaaagtcatctgtaact
ccttacacatagccagtgatatcgcattaggcaaaggggatatttatata
aagaaggtacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_76489892_76491019
seq2: B6Ng01-232B13.b_48_1165

seq1  GAATTCAACTCCATCTTGGGCAAATTATTGAGAATCTGTCTCAAACTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTCCATCTTGGGCAAATTATTGAGAATCTGTCTCAAACTAAA  50

seq1  ATCAAAATCACTGGGTGGCAGGGAGGTGGCTCAGTGATAGAGTGCTTGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAATCACTGGGTGGCAGGGAGGTGGCTCAGTGATAGAGTGCTTGCC  100

seq1  CAGCGTGCACAAGGCTCTGGGTTCAGTCCCCGGTCCTAGAAAACTAAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGTGCACAAGGCTCTGGGTTCAGTCCCCGGTCCTAGAAAACTAAACA  150

seq1  AGTCGTGCCTCCACTCTATAGAGCAAGAAAAACAACTGAAGAGAGAGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCGTGCCTCCACTCTATAGAGCAAGAAAAACAACTGAAGAGAGAGGCA  200

seq1  AATTAGTCAAGTGATTTTGTTTCTATTTTCTGATTTTCATTATTCCTACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGTCAAGTGATTTTGTTTCTATTTTCTGATTTTCATTATTCCTACC  250

seq1  TCAGATTCACACACGTCATTAAGATGGGCCTTAAATAACACAAAAAGGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTCACACACGTCATTAAGATGGGCCTTAAATAACACAAAAAGGTA  300

seq1  CCTTCAGTCACATGATCACATATTAGAGCATCTTAGACACATGTCTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAGTCACATGATCACATATTAGAGCATCTTAGACACATGTCTTTTT  350

seq1  TTATTCTAGAAAAATTAACTTTGACCACAGTTTGATCCGCCAATCAAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTAGAAAAATTAACTTTGACCACAGTTTGATCCGCCAATCAAGGA  400

seq1  GCAGCAGGAAGGCGGTGCTGTGCGTGGTCATGGAGAGCATCCGAACCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAGGAAGGCGGTGCTGTGCGTGGTCATGGAGAGCATCCGAACCACA  450

seq1  CGCCAGTGCTCTCTGTCAGTGCACGCTGGGATTCGTGGGGAAGCCATGCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCAGTGCTCTCTGTCAGTGCACGCTGGGATTCGTGGGGAAGCCATGCG  500

seq1  GGTAAGATACACTCAGGGCTTCACTAACGACACAGTTACTATGGAGTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGATACACTCAGGGCTTCACTAACGACACAGTTACTATGGAGTTTA  550

seq1  AAAAAAAATTACTCATCAAAGGCAGAAAAAAAAAAAAAAAAAAAGAGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAATTACTCATCAAAGGCAGAAAAAAAAAAAAAAAAAAAGAGCCT  600

seq1  CAGTTTTGTAGGGCTTCAGTCCGGAGTGGCTGTGCTTTGGAATAAGAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTGTAGGGCTTCAGTCCGGAGTGGCTGTGCTTTGGAATAAGAAAA  650

seq1  CCAACCAAAACCACTTGGGTTCTAACCCTGTGTGCTACGGTACAAACAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCAAAACCACTTGGGTTCTAACCCTGTGTGCTACGGTACAAACAAT  700

seq1  ATATTACTGGAGTCTCTCCAATTAACTACTACCTCAGTGTTAGAGTAACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTACTGGAGTCTCTCCAATTAACTACTACCTCAGTGTTAGAGTAACC  750

seq1  ACATAAAGTAAGCCTTGATGTCGTATGCTTTGACATTTATTTATTTATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAGTAAGCCTTGATGTCGTATGCTTTGACATTTATTTATTTATTT  800

seq1  ATTTATTTATTGTTTTTTGAGAAAGGGTTTCTCTGTGTAGCCCTAGGC-T  849
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ATTTATTTATTGTTTTTTGAGAAAGGGTTTCTCTGTGTAGCCCTAGGCTT  850

seq1  ATCCT-GGAACTTGCTCTGTAGACCAGGCTGGCCTCAAACTCAGAAATTC  898
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGGGAACTTGCTCTGTAGACCAGGCTGGCCTCAAACTCAGAAATTC  900

seq1  GCCTGCCTCTGCCTCTCAAGTGCTGGGATTAAAGGCATGTACACCACATT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCCTCTGCCTCTCAAGTGCTGGGATTAAAGGCATGTACACCACATT  950

seq1  GCCCCAGTTTTTATTTCATTTTTAAGAAAATCTATTCATACTGAATTTTT  998
      ||| ||  ||||||||||||||| ||||||||||||||||||||  ||||
seq2  GCCTCAAGTTTTATTTCATTTTT-AGAAAATCTATTCATACTGA--TTTT  997

seq1  AAAAGTTGAGGTTTTAGCTAATTCTTTTTGTACTTATTTATTTAGTGCTC  1048
       |||||||||  ||||||| |||||||||||||||| |||||||||||||
seq2  TAAAGTTGAG--TTTAGCT-ATTCTTTTTGTACTTA-TTATTTAGTGCTC  1043

seq1  TGTGTGTGTGTGTGTAAGTGTTCACATGCCACAGTGTGCATGTTGAAGTC  1098
      || |||||||||||| || ||||||||| ||||||||||||| || ||||
seq2  TGGGTGTGTGTGTGT-AGCGTTCACATG-CACAGTGTGCATG-TGGAGTC  1090

seq1  AAAGGACAAATTGTGGGACTCA-GTTTTCTC  1128
      ||  ||| |||||||||||||| ||||||||
seq2  AA--GAC-AATTGTGGGACTCAGGTTTTCTC  1118

seq1: chr2_76601625_76602814
seq2: B6Ng01-232B13.g_67_1277 (reverse)

seq1  GGTACCTT-----TATA---ATCCCCTTTG-CTAATGC---AT-AATGCA  37
      ||||||||     ||||   |||||||||| |||||||   || | ||  
seq2  GGTACCTTCTTTATATAAATATCCCCTTTGCCTAATGCGATATCACTGGC  50

seq1  TATGT---AAGAGTTTCAGTATGACCTTTGCA-CCAAGTATATGGGATGT  83
      |||||   | ||||| ||| ||||| || ||| ||||||||   ||||||
seq2  TATGTGTAAGGAGTTACAG-ATGACTTTGGCACCCAAGTATTATGGATGT  99

seq1  TTAGTTCAACATGTTGAAAATG-AAGTATAAGATGAAG-AAACTAATAAG  131
      ||||||||||||||  |||||| ||||||||||||||| |||||||||||
seq2  TTAGTTCAACATGTGAAAAATGAAAGTATAAGATGAAGAAAACTAATAAG  149

seq1  TTTTG-TCTGA-GAGAGATATTCACTGT-ACTCTTGGGGTTTCAGGTTTC  178
      ||||| || || |||||||| |||| || ||||||| |  ||||| ||||
seq2  TTTTGTTCGGAGGAGAGATA-TCACGGTAACTCTTGAG--TTCAGATTTC  196

seq1  ACAAATCAAGTCCCTTCCGGTGGATT-ATAATCATACTGATCTCATGACC  227
      |||| ||||||||||||| ||||||| |||||||||||||||||||||||
seq2  ACAATTCAAGTCCCTTCC-GTGGATTAATAATCATACTGATCTCATGACC  245

seq1  TTAGTAAACTAGAGGGCTGCAATC-AAAGGGGAGAAGAACGGAGATTGCT  276
      |||||||||||||||||||||||| |||||| | ||||||||||| ||||
seq2  TTAGTAAACTAGAGGGCTGCAATCAAAAGGGAAAAAGAACGGAGAATGCT  295

seq1  TACTGAGAGGATCTGATGCAAGCACAGGTTTGGGGATGTCTGTCGGGACA  326
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAGAGGATCTGATGCAAGCACAGGTTTGGGGATGTCTGTCGGGACA  345

seq1  CCAGGGCCATATTCATTGACAGCA-GTTACTCGGAAGAAATACTCGTTCC  375
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CCAGGGCCATATTCATTGACAGCAGGTTACTCGGAAGAAATACTCGTTCC  395

seq1  CAGGGACAAGGTTGGTTACATTGAAGCTTGTTTTCTTCACTTCAGGGGTA  425
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGACAAGGTTGGTTACATTGAAGCTTGTTTTCTTCACTTCAGGGGTA  445

seq1  ACTGTTGACCATGTTTTTCTTTCTGCCTCACGTTTCTCCACAATATAATG  475
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTGACCATGTTTTTCTTTCTGCCTCACGTTTCTCCACAATATAATG  495

seq1  TGTCACTTGGCTTCCACCATCATTTTCAGGAGGTGCCCAGGACACGTGAC  525
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACTTGGCTTCCACCATCATTTTCAGGAGGTGCCCAGGACACGTGAC  545

seq1  ATGATGTTTTAGTGACATCTGAAACTTTTAAATCAGCCACAGGTCCAGGA  575
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGTTTTAGTGACATCTGAAACTTTTAAATCAGCCACAGGTCCAGGA  595

seq1  GTATCTGTAAAGATCCACAGACTCAGAACATATGTCCCATAAGCATTCTT  625
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTGTAAAGATCCACAGACTCAGAACATATGTCCCATAAGCATTCTT  645

seq1  ATTAACTTATTTGATTTTGAAGCAGAAAAAAAAAAGCACTTGGATAACGC  675
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACTTATTTGATTTTGAAGCAGAAAAAAAAAAGCACTTGGATAACGC  695

seq1  ACCTAGTACTTTGACATTCACAAAAACAGCCTTTTCTCCTGCTGGGTTCA  725
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGTACTTTGACATTCACAAAAACAGCCTTTTCTCCTGCTGGGTTCA  745

seq1  CAAGGGTCAGGGAGTATTTTCCAGAGTCATCACGGGTAGAGTTGGGGATG  775
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGTCAGGGAGTATTTTCCAGAGTCATCACGGGTAGAGTTGGGGATG  795

seq1  ACAAGGAAGGCCATAGTGTCAACTAGATCGACTTGTCCTTTTCTGACCAC  825
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGAAGGCCATAGTGTCAACTAGATCGACTTGTCCTTTTCTGACCAC  845

seq1  ATTATCAATGCCCACTTTGCGCCATGTGACTTTGGGGGCAGGTCGTCCTC  875
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCAATGCCCACTTTGCGCCATGTGACTTTGGGGGCAGGTCGTCCTC  895

seq1  TCACTATTGCGAATAGTCGAATAGGGCAGCCAGCTCTCACTACGACCAGT  925
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTATTGCGAATAGTCGAATAGGGCAGCCAGCTCTCACTACGACCAGT  945

seq1  TTTCTCATGCTGGCATCCAAGTCAATCTCTGGAGGCTCTGCAAACGACAC  975
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCATGCTGGCATCCAAGTCAATCTCTGGAGGCTCTGCAAACGACAC  995

seq1  AAAAGACATCAGCCGACTCTTGAGACACGAGGAAGCCCATGACCGTGAGA  1025
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGACATCAGCCGACTCTTGAGACACGAGGAAGCCCATGACCGTGAGA  1045

seq1  ATGCATGCAGATGACTATCTACCACCACAAAAGGGCCTCACCTAGGATTT  1075
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATGCAGATGACTATCTACCACCACAAAAGGGCCTCACCTAGGATTT  1095

seq1  CTTTAGGTTTGATGGCTTCCTTTAGCTCTGCAGGGCGCCCAATGCCAACT  1125
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGGTTTGATGGCTTCCTTTAGCTCTGCAGGGCGCCCAATGCCAACT  1145

seq1  TGATTCTGGGCACACACCCTGAACTCGTACTCCTGGTTCTCATCC-AAGC  1174
      |||||||||||||||||||||||||||||||||||||||||||||  |||
seq2  TGATTCTGGGCACACACCCTGAACTCGTACTCCTGGTTCTCATCCTTAGC  1195

seq1  TGGTGACTGTGAATTC  1190
      ||||||||||||||||
seq2  TGGTGACTGTGAATTC  1211