BAC Information

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BAC

Clone NameB6Ng01-234D09
Chromosome2 (Build37)
Map Location 82,226,324 - 82,227,314
singlet/doubletsinglet
Overlap geneA130030D18Rik
Upstream geneLOC100040704, Zfp804a, LOC100041308
Downstream geneEG624362, LOC433550, LOC269292, LOC433440, Fsip2, LOC545429
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-234D09.bB6Ng01-234D09.g
ACCGA046037GA046038
length9841,186
definitionB6Ng01-234D09.b B6Ng01-234D09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttggaggagcagagtgcctcaccaaatgaggcttccaaataaga
gaacatcattaaattggggcttaaaatcatgcagcagaaaccaactgtca
acggaaacaatcatgtttgagttcatgagatagaattccaggccatgaag
atcatttcttccctgtagtaccttttggattctctttcacactgtaggcg
ttctcatattttgagttgctgtaaaacctatttaatcccgaccctgagtt
aactatttactccaccttaaccatttactttcagataaaagatagacact
atttttatatttataataagccttaatcaacactagagctggtcataaaa
tctaccctctatgctaatagaatctacttttttatttataaccccgagtt
attccttactatatttcatctgagcagctcttaactgcaactggccagac
ctcaggaccactttttcatgtctcacagtattcataggtttgtacaactg
tattattttatcacatgtatgattttatgttaccaccacaatcaagattc
tcaacctaactaccatcacaacctccatggagctatagttttgctgctac
actgtataccatgtactctagaactgattttaaagtcagcagtaagtttt
tcatctttaaatttattgtatttcacaaatgttagcagttgtgatcctat
ggttgaatttattcagagagcataatttcatctttcatcaaccactgaaa
atgtgcttataaatagttccatcctttctattgattggtagtattacatg
tcatgcatccaccatggagtttttaatcatcaacagacatttcatgagtc
ttctattcttggaaaaaataataataaccaaacagacaaaaattccgcag
ctataaataaaccatttgcagtttgatgtgaaaattgatcttatttctac
gatagctgtgtaataatagtgagtaatatagtat
gaattccacataaaaccagagacactgaaacttatagaggagaaagtagg
gaaaagccttgaagatatgggtacaggggaaaaattcctgaatagaacag
caatggcttgtgctgtaagatcaagaatcgataaatgggacctcataaaa
ttgcaaagcttctgcaaagaaaaagacacagtcaataagacaaaaaggcc
accaacagattgggaaaggatctttacctatcccaaatcggataggggac
taatatccaatatatataaagaactcaagaaggtggactccagaaaatca
aataaccccattaaaaatggggctcagagctcaacaaagaattctcacct
gaggaataccgaatggcagagaagcacctgaaaaaatgttcaacatcctt
aatcatcagggaaatgcaaatcaaaacaacactgagattccacttcactc
cagtcagaatggctaagatcaaaaactcaggtgacagcagatgctggcga
ggatgtggagaaaggggaacactcctccattgttggtgggattgcaagct
tgtacaaccactctggaaatcagtatggccgttcctcagaaaattggaca
tagtactaccagaggatcccgcaatacctctcctgggcatatatgcagaa
gatgtcccaaccggtaagaagaacacatgctccactatgttcatagaagc
cttatttataatagccagaagctggaaagaacccagatgcccctcaacag
aggaatgaatacagaaaatgtggtacatttacacaatggaatactactca
gctattaaaaaaatgaatttatgaaattcctaggcaaatggatggacctg
gagattatcatcctgagtgaagtaacccaatcacaaaggaactcgcacaa
tatgtcctcactgataagtggatattagcccagaaacttaggatacccaa
gatataacatacaacttgccaaacgcatgaaattcaagaagaacgaagac
caagtgtgacacttcttaccctttcttagaaatgggacaaaacacccata
gaggagtagaagagacaaaattggagctgtgacgaaagatggaccatcta
gtgattgcatattgccaggaatccatcgatatcagcttcaatgctgaacc
catgcatacacctagcagggattgtgtctgttgaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_82226324_82227314
seq2: B6Ng01-234D09.b_46_1029 (reverse)

seq1  ATACTATATTACTCACTAATTATACACAGCTATTCCGTAGAAATTAAGAT  50
      |||||||||||||||||| |  |||||||||||  |||||||| ||||||
seq2  ATACTATATTACTCACTATTATTACACAGCTAT--CGTAGAAA-TAAGAT  47

seq1  CAATTTTCACATTCAAAAACTGCAAATGGGTTTATTTATAGCTGCGGAAT  100
      ||||||||||||    ||||||||||| ||||||||||||||||||||||
seq2  CAATTTTCACAT---CAAACTGCAAAT-GGTTTATTTATAGCTGCGGAAT  93

seq1  TTTTGTCTGTTTGGTTATTATTATTTTTTCCAAGAATAGAAGACTCATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTGTTTGGTTATTATTATTTTTTCCAAGAATAGAAGACTCATGA  143

seq1  AATGTCTGTTGATGATTAAAAACTCCATGGTGGATGCATGACATGTAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCTGTTGATGATTAAAAACTCCATGGTGGATGCATGACATGTAATA  193

seq1  CTACCAATCAATAGAAAGGATGGAACTATTTATAAGCACATTTTCAGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCAATCAATAGAAAGGATGGAACTATTTATAAGCACATTTTCAGTGG  243

seq1  TTGATGAAAGATGAAATTATGCTCTCTGAATAAATTCAACCATAGGATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGAAAGATGAAATTATGCTCTCTGAATAAATTCAACCATAGGATCA  293

seq1  CAACTGCTAACATTTGTGAAATACAATAAATTTAAAGATGAAAAACTTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGCTAACATTTGTGAAATACAATAAATTTAAAGATGAAAAACTTAC  343

seq1  TGCTGACTTTAAAATCAGTTCTAGAGTACATGGTATACAGTGTAGCAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGACTTTAAAATCAGTTCTAGAGTACATGGTATACAGTGTAGCAGCA  393

seq1  AAACTATAGCTCCATGGAGGTTGTGATGGTAGTTAGGTTGAGAATCTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATAGCTCCATGGAGGTTGTGATGGTAGTTAGGTTGAGAATCTTGA  443

seq1  TTGTGGTGGTAACATAAAATCATACATGTGATAAAATAATACAGTTGTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGTGGTAACATAAAATCATACATGTGATAAAATAATACAGTTGTAC  493

seq1  AAACCTATGAATACTGTGAGACATGAAAAAGTGGTCCTGAGGTCTGGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTATGAATACTGTGAGACATGAAAAAGTGGTCCTGAGGTCTGGCCA  543

seq1  GTTGCAGTTAAGAGCTGCTCAGATGAAATATAGTAAGGAATAACTCGGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCAGTTAAGAGCTGCTCAGATGAAATATAGTAAGGAATAACTCGGGG  593

seq1  TTATAAATAAAAAAGTAGATTCTATTAGCATAGAGGGTAGATTTTATGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAATAAAAAAGTAGATTCTATTAGCATAGAGGGTAGATTTTATGAC  643

seq1  CAGCTCTAGTGTTGATTAAGGCTTATTATAAATATAAAAATAGTGTCTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCTAGTGTTGATTAAGGCTTATTATAAATATAAAAATAGTGTCTAT  693

seq1  CTTTTATCTGAAAGTAAATGGTTAAGGTGGAGTAAATAGTTAACTCAGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATCTGAAAGTAAATGGTTAAGGTGGAGTAAATAGTTAACTCAGGG  743

seq1  TCGGGATTAAATAGGTTTTACAGCAACTCAAAATATGAGAACGCCTACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGATTAAATAGGTTTTACAGCAACTCAAAATATGAGAACGCCTACAG  793

seq1  TGTGAAAGAGAATCCAAAAGGTACTACAGGGAAGAAATGATCTTCATGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAAGAGAATCCAAAAGGTACTACAGGGAAGAAATGATCTTCATGGC  843

seq1  CTGGAATTCTATCTCATGAACTCAAACATGATTGTTTCCGTTGACAGTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAATTCTATCTCATGAACTCAAACATGATTGTTTCCGTTGACAGTTG  893

seq1  GTTTCTGCTGCATGATTTTAAGCCCCAATTTAATGATGTTCTCTTATTTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGCTGCATGATTTTAAGCCCCAATTTAATGATGTTCTCTTATTTG  943

seq1  GAAGCCTCATTTGGTGAGGCACTCTGCTCCTCCAAGAATTC  991
      |||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCTCATTTGGTGAGGCACTCTGCTCCTCCAAGAATTC  984