BAC Information

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BAC

Clone NameB6Ng01-234K08
Chromosome2 (Build37)
Map Location 142,775,306 - 142,775,865
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-234K08.bB6Ng01-234K08.g
ACCGA046351GA046352
length1,0021,180
definitionB6Ng01-234K08.b B6Ng01-234K08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgatctttccagaacttttatcatgagtggttgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctatcttgtgaaaaagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggacactatttataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcctccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcagttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctctttggttaattctttgaa
tagttcttcttgtttccacttggttgatttcacccctgagtttgattatt
tcctgccgtctactcctcttgggtgaatttgcttcctttttttctagagc
ttttagatgtgttgtcaagctgctaatatgtgctctctcccgtttcttct
tggaggcactcagagctatgagtttccctcttagaaatgctttcattgtg
tc

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaacaaagtttggagctgagatgaa
aggatggaccatgtagagactgccatatccagggatccaccccataatca
gcatccaaacgctgacaccattgcatatactagcaagattttatcgaaag
gacccagatgtagctgtctcttgtgagactatgccggggcctagcaaaca
cagaagtggatgctcacagtcagctaatggatggatcacagggctcccaa
tggagagctagagaaagtacccaagagctaaaggatcttcaaccctatag
tggaacacattatgaactaaccagtaccctgagctcttgactctagctgc
atatgtatcaaagatgctagtcgcatcactgtaaagaagagcccatggaa
ccgcagaacttgttgtgccctggtcagggtacgcaaggtcaagggggcaa
gttgggttggcttatgacgtacacttcgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142775306_142775865
seq2: B6Ng01-234K08.b_44_603 (reverse)

seq1  CCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCTTCTAAACAGTCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCTTCTAAACAGTCCCA  50

seq1  TATCCCCTAGAGAAATAGAAGCAGTTATAAATAGTCTCCCAGCCAAAAAA  100
      ||||||||| ||||||||||||||||||||||||| ||||||||||||||
seq2  TATCCCCTAAAGAAATAGAAGCAGTTATAAATAGTGTCCCAGCCAAAAAA  100

seq1  AGCCCAGGACCAGACGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAGGACCAGACGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGA  150

seq1  AGATCTAATTCCAGTTCTGCACAAACTTTTTCACAAGATAGAAGTAGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTAATTCCAGTTCTGCACAAACTTTTTCACAAGATAGAAGTAGAAG  200

seq1  GTACTCTACCCAACTCATTTTATGAAGCCACTATTACTCTGATACCTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCTACCCAACTCATTTTATGAAGCCACTATTACTCTGATACCTAAA  250

seq1  CCACAGAAAGATCCAACAAAGATAGAGAACTTCAGACCAATTTCTCTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGAAAGATCCAACAAAGATAGAGAACTTCAGACCAATTTCTCTTAT  300

seq1  GAATATCGATGTAAAAATCCTCAATAAAATTCTCGCTAACCGAATCCAAG  350
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GAATATCGATGCAAAAATCCTCAATAAAATTCTCGCTAACCGAATCCAAG  350

seq1  AACACATTAAAGCAATCATCCATACTGACCAAGTAGGTTTTATTCCAGGG  400
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AACACATTAAAGCAATCATCCATCCTGACCAAGTAGGTTTTATTCCAGGG  400

seq1  ATGCAGGGATGGTTTAATATACGAAAATCCATCAATGTAATCCATTATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGGGATGGTTTAATATACGAAAATCCATCAATGTAATCCATTATAT  450

seq1  AAACAAACTCAAAGACAAAAACCACATGATCATCTCGTTAGATGCAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACTCAAAGACAAAAACCACATGATCATCTCGTTAGATGCAGAAA  500

seq1  AAGCATTTGACAAGATCCAACACCCATTCATGATAAAAGTTCTGGAAAGA  550
      |||||||||||||||||||||| ||| |||||||||||||||||||||||
seq2  AAGCATTTGACAAGATCCAACAACCACTCATGATAAAAGTTCTGGAAAGA  550

seq1  TCAGGAATTC  560
      ||||||||||
seq2  TCAGGAATTC  560


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