BAC Information

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BAC

Clone NameB6Ng01-235J18
Chromosome2 (Build37)
Map Location 95,926,608 - 95,927,733
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042843
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-235J18.bB6Ng01-235J18.g
ACCGA047041GA047042
length1,1571,119
definitionB6Ng01-235J18.b B6Ng01-235J18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtaccacattttaaaatagggttatctagtt
ttctggagtccaacttcttgaattctttatattcattggatattagcccc
cctatcagatttaggattggtaaagatcttttcccaatctgttggtggcc
ttttttgtcttattgacagtgtcctttgccttacagaagctttgcaattt
tatgaggtcccatttgttaattcttgattttacagcacaagccattgctg
ttctattcagggatcttttccctgtgcccataactttcaatgtctctggt
tttatgtggaattctttgattcacatagacctgagctttttgcaaggaga
taagaatggatcaattctcattcttctacatgatgactgccagttgacac
agtaccatttgttgatgattccactggatgggtttcactcctttgtcaaa
gatcaagtgaacataggtgtgtgggttcatttctgggtcttcaattctgt
tccattgatttatatgtctattgctgtaacagtatcatgcagattttatc
acaattgctctgtagcatagcctgaggtgggggatgatggttccaccaga
agttcttttattgttgagaatcattttttctatcctaggttttttttgtt
attccagaagaatttgcaaattgtcctttctaactcagtgaagaatttag
ttggaattttgatggggattgcactgaatctgtagattgctttttggaag
atagccatttttactatattgatcctgccaatccataagcatgggaggtc
tttctgtcttttgaggtcttctttgatttttttcttcagagacttgaagt
tcttatcacacagatctttcactttctttagttagagtcacaccaaggtt
attttatattacttgtgacttatgtgaagggtgttggttccctaatttca
ttcttcagcctgtttatcctttttttagaagaaaggtcactgaatttgtt
tgagttaatctttatatccatctacttcactgaagttatcagtttaaggg
agttctcctggtggaattttaaggacacttactatacctatcacactatc
taccaataggacattggatttcttccttggcaattggaattactgtgaat
tttctcc

gaattctccatacagcaggaaagatgaatgtcaagtttacccatggggac
atggatggaaagccaaggaagagctagctgcttctcttctacccttgatt
agtgtagtaatccgtagtttgtgtccagaatcctagctttttaatagtta
ctacattaaaagttaagtttacacttaagtcttatagggatgtaatgttt
caaattagagcacttattaaacatttgaaaagttgtacaactttggcaag
gatctggggaaaagggacaaaaataattggaaaacacaaataacactact
tcacacccaccagttaagtgtcagtcatatgatagtagtaggtgatggta
aatgggatagaaagtggaatcacaaggcagtgttaacattttggagaaca
atttgaaatgcttaataaaattgctaggtacatacagtgtgagtcacact
tactcatctgtctgtataacctataaaaatcccattacatgtttacatgt
ttggacaactttgctaatagtgacaaagaactcaaactgaatacaatgct
ttctaccaggagggtgaaaaaaaatggaatgtccttttgtatagttcaat
aatgtcataaatgaagaggaaataactagaattctttatgtcatagtcag
tctcaggaaaaggtactcagagaaggaaataatttaaaaatgacatacag
aaagttcacatgcaatataaatatatatgtaatactataaacatatgggc
ataaatatgttagtcctcatgtttatattgcttgagctctatcaacaata
atcatctcatgatctcaatcatcccatggatatatcttctagcaggaata
gttttgaatgaattagagcaataaatattgaattttaaaaacattaaaaa
attaatttaaattttatactataaagtaattacttcgtttttcttctttt
tattttctcctcctcccgtgtacacaagtctacctcttgccttcttttca
aaaatgtttaaaaatgcttgaaagatgggcttgtctttaagagtgtggct
cacagaaaatgaatggcacaatgcttaaatgaaggcaacaatgtagtgat
ggatataggtctttaaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_95926608_95927733
seq2: B6Ng01-235J18.g_67_1185

seq1  GAATTCTCCATACAGCAGGAAAGATGAATGTCAAGTTTACCCATGGGGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATACAGCAGGAAAGATGAATGTCAAGTTTACCCATGGGGAC  50

seq1  ATGGATGGAAAGCCAAGGAAGAGCTAGCTGCTTCTCTTCTACCCTTGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATGGAAAGCCAAGGAAGAGCTAGCTGCTTCTCTTCTACCCTTGATT  100

seq1  AGTGTAGTAATCCGTAGTTTGTGTCCAGAATCCTAGCTTTTTAATAGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTAGTAATCCGTAGTTTGTGTCCAGAATCCTAGCTTTTTAATAGTTA  150

seq1  CTACATTAAAAGTTAAGTTTACACTTAAGTCTTATAGGGATGTAATGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATTAAAAGTTAAGTTTACACTTAAGTCTTATAGGGATGTAATGTTT  200

seq1  CAAATTAGAGCACTTATTAAACATTTGAAAAGTTGTACAACTTTGGCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTAGAGCACTTATTAAACATTTGAAAAGTTGTACAACTTTGGCAAG  250

seq1  GATCTGGGGAAAAGGGACAAAAATAATTGGAAAACACAAATAACACTACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGGGGAAAAGGGACAAAAATAATTGGAAAACACAAATAACACTACT  300

seq1  TCACACCCACCAGTTAAGTGTCAGTCATATGATAGTAGTAGGTGATGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACCCACCAGTTAAGTGTCAGTCATATGATAGTAGTAGGTGATGGTA  350

seq1  AATGGGATAGAAAGTGGAATCACAAGGCAGTGTTAACATTTTGGAGAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGATAGAAAGTGGAATCACAAGGCAGTGTTAACATTTTGGAGAACA  400

seq1  ATTTGAAATGCTTAATAAAATTGCTAGGTACATACAGTGTGAGTCACACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAAATGCTTAATAAAATTGCTAGGTACATACAGTGTGAGTCACACT  450

seq1  TACTCATCTGTCTGTATAACCTATAAAAATCCCATTACATGTTTACATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCATCTGTCTGTATAACCTATAAAAATCCCATTACATGTTTACATGT  500

seq1  TTGGACAACTTTGCTAATAGTGACAAAGAACTCAAACTGAATACAATGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACAACTTTGCTAATAGTGACAAAGAACTCAAACTGAATACAATGCT  550

seq1  TTCTACCAGGAGGGTGAAAAAAAATGGAATGTCCTTTTGTATAGTTCAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACCAGGAGGGTGAAAAAAAATGGAATGTCCTTTTGTATAGTTCAAT  600

seq1  AATGTCATAAATGAAGAGGAAATAACTAGAATTCTTTATGTCATAGTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCATAAATGAAGAGGAAATAACTAGAATTCTTTATGTCATAGTCAG  650

seq1  TCTCAGGAAAAGGTACTCAGAGAAGGAAATAATTTAAAAATGACATACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGAAAAGGTACTCAGAGAAGGAAATAATTTAAAAATGACATACAG  700

seq1  AAAGTTCACATGCAATATAAATATATATGTAATACTATAAACATATGGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTCACATGCAATATAAATATATATGTAATACTATAAACATATGGGC  750

seq1  ATAAATATGTTAGTCCTCATGTTTATATTGCTTGAGCTCTATCAACAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATATGTTAGTCCTCATGTTTATATTGCTTGAGCTCTATCAACAATA  800

seq1  ATCATCTCATGATCTCAATCATCCCATGGATATATCTTCTAGCAGGAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCTCATGATCTCAATCATCCCATGGATATATCTTCTAGCAGGAATA  850

seq1  GTTTTGAATGAATTAGAGCAATAAATATTGAA-TTTAAAAACATTAAAAA  899
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GTTTTGAATGAATTAGAGCAATAAATATTGAATTTTAAAAACATTAAAAA  900

seq1  ATTAATTTAAATTTTATACTATAAAGTAATTACTTCGTTTT--CTCCTTT  947
      |||||||||||||||||||||||||||||||||||||||||   || |||
seq2  ATTAATTTAAATTTTATACTATAAAGTAATTACTTCGTTTTTCTTCTTTT  950

seq1  TATTTTCTC--TCTCCCGTGTACACCAGTCTACCCTCCTTGCCCTC-TTT  994
      |||||||||   ||||||||||||| ||||||||   |||||| || |||
seq2  TATTTTCTCCTCCTCCCGTGTACACAAGTCTACC--TCTTGCCTTCTTTT  998

seq1  CAAAAATGTTTAAAAATGCTTTGAAAGATGGCTTTGTCTTTAAAGAGTGT  1044
      ||||||||||||||||||| |||||||||||  |||||||| ||||||||
seq2  CAAAAATGTTTAAAAATGC-TTGAAAGATGGGCTTGTCTTT-AAGAGTGT  1046

seq1  GGCTCACAAGAAAAATGAAATGGGACCATGCTTTAAATGAAAGGCCAACC  1094
      ||||||||   |||||| ||||| || |||| |||||||||  | |||| 
seq2  GGCTCACA--GAAAATG-AATGGCACAATGC-TTAAATGAA--GGCAAC-  1089

seq1  ATATGTAGTGATGAATATTAAGTCTTTAAAAT  1126
        ||||||||||| ||| || |||||||||||
seq2  -AATGTAGTGATGGATA-TAGGTCTTTAAAAT  1119


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