BAC Information

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BAC

Clone NameB6Ng01-236G01
Chromosome2 (Build37)
Map Location 138,613,554 - 138,614,687
singlet/doubletsinglet
Overlap genenone
Upstream geneBtbd3
Downstream geneLOC628103, C130053K05Rik, LOC100043792, 5430433G21Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-236G01.bB6Ng01-236G01.g
ACCGA047611GA047612
length1,127966
definitionB6Ng01-236G01.b B6Ng01-236G01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcctggtctgtctacgtggtttctccacacctttttatcctctt
ctctccctttgttcttcctctctggtctcttcaaatccccctgacttgga
ttggaagtcttgtactatattctctttttgccagctatcagctaaatcag
ctctttattactcaatctgagatgatggaaaacattttttttacataaca
tttgagaagggagatgtttgaccatgccaacatccaactgcaaacagatg
cctggcatagaaatcagcatctgaatacacagtgcacaaaaccatcccct
aacaatcatcagaagtgaaaatgtgggtctttgaccaggatgccatgaat
tttcatgaagacttaacacagcagttaagggtcgtgccttttgaagtgac
ctcagcacagaagagcagcacctaagagagaaagcaaagttcattcagta
tggacaaaatgggatgaagaaccagccggcaaatcattttaatcaggcat
tttacagttgctagtatttcctgacatcaaatgacagtctgatcacccag
tgagcaattagaataatctcaccattacttttgagttatcactgttgtaa
agctcttgctaattttttttaaagcaaaaaaaatttggtgttcaaatgtt
aacaaacattaatatctcttggagagatgacaatctagaaacaccaggag
ctccaccctagattgggtttgaagttggtgtctgtggatttgcatttctc
agcagctcctgagtaatgtcattttattttatgtcagtttgaagaactct
gagactcctgagactgtccaaaagtctcttgtgttttaacaaagttcaag
gtgaaatagatgctctctatggtatgagaacttcttcaaaacacgggttc
ttggtttcagcctaacattgcatgagttttgggcttaacaaggatggctt
gcttattgacttcctatgtcaggtcttagtctgttctgataaagtcagaa
gtggaaacaccttgacagagatgggtgaggcctcttaacaggtcaatata
cagtcagcttcatactggtgtttagaacaataactcatttctagtgtagg
cttagaactaactgcaatatgtagttt

gaattcattataagcactgaatggtatattttaatcaggtaaattttata
gtgtgtgaattattcaccaataaaagtaattaaatgaaagaaagagggaa
cctaatttaattcttgacagtcttatgaaacagctacagggcatctggtc
attatgaacaaattcagtcatttttaattactgaacagtaaaaaagttga
aaataaaactcatattcactcatgtaagtttatacagcatccaaggaggt
ttgcagaagggattacatttacatttgctggttaattctagtgtgacatc
tagtatttgagctccagccctagaatattaaattatatttacatttttga
aagggttagaaaattccaaaagataacaattattttgacaagtagaatat
gtgcacaaaggtcatttagattttgggctttcaaagtaagaatttattgt
ttttttcttttatggaaaatgatttctcacataatataccctgattaaaa
ccgtcccttcatagttctttcccacatccctgcccatccagatccacccc
ttctatgtctctattaaaaaacaaacaaaatattctacgggataatattg
aaataaaacaaggcaaaacaaaaactaacacatcagaattgggcaaaaga
aacaagcagaaaagatcccaagaggaggcacaagaaacagagacccactc
attcacaaactcaaggatttcaaaaatacactaaactggaagccaatgac
atatgcacaaatgatgtgtagtataaaaagacggaatatatatatatata
tatatatatatatatatatatatgtatatatggatatatagatatatata
tatatatatatatatatgatatatctatatgtgatagagatatatagata
tatgtatgtttgtgtaatatgagtgatctactgtttattatatactgcat
gtgtgattttttttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_138613554_138614687
seq2: B6Ng01-236G01.b_43_1169

seq1  GAATTCTCCTGGTCTGTCTACGTGGTTTCTCCACACCTTTTTATCCTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTGGTCTGTCTACGTGGTTTCTCCACACCTTTTTATCCTCTT  50

seq1  CTCTCCCTTTGTTCTTCCTCTCTGGTCTCTTCAAATCCCCCTGACTTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCTTTGTTCTTCCTCTCTGGTCTCTTCAAATCCCCCTGACTTGGA  100

seq1  TTGGAAGTCTTGTACTATATTCTCTTTTTGCCAGCTATCAGCTAAATCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGTCTTGTACTATATTCTCTTTTTGCCAGCTATCAGCTAAATCAG  150

seq1  CTCTTTATTACTCAATCTGAGATGATGGAAAACATTTTTTTTACATAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTATTACTCAATCTGAGATGATGGAAAACATTTTTTTTACATAACA  200

seq1  TTTGAGAAGGGAGATGTTTGACCATGCCAACATCCAACTGCAAACAGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGAAGGGAGATGTTTGACCATGCCAACATCCAACTGCAAACAGATG  250

seq1  CCTGGCATAGAAATCAGCATCTGAATACACAGTGCACAAAACCATCCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCATAGAAATCAGCATCTGAATACACAGTGCACAAAACCATCCCCT  300

seq1  AACAATCATCAGAAGTGAAAATGTGGGTCTTTGACCAGGATGCCATGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATCATCAGAAGTGAAAATGTGGGTCTTTGACCAGGATGCCATGAAT  350

seq1  TTTCATGAAGACTTAACACAGCAGTTAAGGGTCGTGCCTTTTGAAGTGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGAAGACTTAACACAGCAGTTAAGGGTCGTGCCTTTTGAAGTGAC  400

seq1  CTCAGCACAGAAGAGCAGCACCTAAGAGAGAAAGCAAAGTTCATTCAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCACAGAAGAGCAGCACCTAAGAGAGAAAGCAAAGTTCATTCAGTA  450

seq1  TGGACAAAATGGGATGAAGAACCAGCCGGCAAATCATTTTAATCAGGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAAAATGGGATGAAGAACCAGCCGGCAAATCATTTTAATCAGGCAT  500

seq1  TTTACAGTTGCTAGTATTTCCTGACATCAAATGACAGTCTGATCACCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAGTTGCTAGTATTTCCTGACATCAAATGACAGTCTGATCACCCAG  550

seq1  TGAGCAATTAGAATAATCTCACCATTACTTTTGAGTTATCACTGTTGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAATTAGAATAATCTCACCATTACTTTTGAGTTATCACTGTTGTAA  600

seq1  AGCTCTTGCTAATTTTTTTTAAAGCAAAAAAAATTTGGTGTTCAAATGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTTGCTAATTTTTTTTAAAGCAAAAAAAATTTGGTGTTCAAATGTT  650

seq1  AACAAACATTAATATCTCTTGGAGAGATGACAATCTAGAAACACCAGGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACATTAATATCTCTTGGAGAGATGACAATCTAGAAACACCAGGAG  700

seq1  CTCCACCCTAGATTGGGTTTGAAGTTGGTGTCTGTGGATTTGCATTTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACCCTAGATTGGGTTTGAAGTTGGTGTCTGTGGATTTGCATTTCTC  750

seq1  AGCAGCTCCTGAGTAATGTCATTTTATTTTATGTCAGTTTGAAGAACTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCTCCTGAGTAATGTCATTTTATTTTATGTCAGTTTGAAGAACTCT  800

seq1  GAGACTCCTGAGACTGTCCAAAAGTCTCTTGTGTTTTAACAAAGTTCAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTCCTGAGACTGTCCAAAAGTCTCTTGTGTTTTAACAAAGTTCAAG  850

seq1  GTGAAATAGATGCTCTCTATGGTATGAGAACTTCTTCAAAACACGGGTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAATAGATGCTCTCTATGGTATGAGAACTTCTTCAAAACACGGGTTC  900

seq1  TTGGTTTCAGCCTAACATTGCATGAGTTTT-GGCTTAACAAGGATGGCTT  949
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTGGTTTCAGCCTAACATTGCATGAGTTTTGGGCTTAACAAGGATGGCTT  950

seq1  GCTTATTGACTTCCTATGTCAGGGTCTTAGTCTGTTCTGATAAAGTCAGA  999
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GCTTATTGACTTCCTATGTCA-GGTCTTAGTCTGTTCTGATAAAGTCAGA  999

seq1  AGTGGAAACACCTTGACAAGGAGATTGGGTGAAGGCCTCTT-ACAGGTCA  1048
      ||||||||||||||||||  |||| |||||| ||||||||| ||||||||
seq2  AGTGGAAACACCTTGACA--GAGA-TGGGTG-AGGCCTCTTAACAGGTCA  1045

seq1  ATATACAGTCAAGCTTCAATAACTGTGTTTTAGACCATAACTTCATTTCT  1098
      |||||||||| |||||| |||   ||||||   || ||||| ||||||||
seq2  ATATACAGTC-AGCTTC-ATACTGGTGTTTAGAACAATAAC-TCATTTCT  1092

seq1  AGGTTGTAAGCCTAG-ACTAACTGCAATATGTAGTTT  1134
      ||  |||| || ||| |||||||||||||||||||||
seq2  AG--TGTAGGCTTAGAACTAACTGCAATATGTAGTTT  1127


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