BAC Information

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BAC

Clone NameB6Ng01-237K21
Chromosome2 (Build37)
Map Location 36,043,698 - 36,044,734
singlet/doubletsinglet
Overlap geneMrrf
Upstream geneRab14, Gsn, Stom, LOC654354, 4930568D16Rik, 4930402F06Rik, Ggta1, LOC666042, LOC100042194, Dab2ip, Ttll11, Ndufa8, 1700010A17Rik, Lhx6, Rbm18, LOC100042236
Downstream geneLOC100040493, Ptgs1, Olfr334-ps1, Olfr335, Olfr336-ps1, Olfr337-ps1, Olfr338, LOC675440, Olfr339, Olfr340, Olfr341, Olfr342, Olfr343-ps1, Olfr344, Olfr345, Olfr346, Olfr347, Olfr348, Olfr50, Rpl18p, Olfr3, Olfr349-ps1, Olfr350, Olfr351, Olfr352, Olfr353, Olfr354, Olfr355, Olfr356, Olfr357, Olfr358, Olfr359-ps1, Olfr360, Olfr361, Olfr362, Olfr364-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-237K21.bB6Ng01-237K21.g
ACCGA048572GA048573
length1,1971,061
definitionB6Ng01-237K21.b B6Ng01-237K21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactggtcttaccatgttccccatcatcctgaagcagctggtctg
atagaaagatggaatggccttttgaagacgcagttacagcgccaattaag
tggtaacagcttggaaggctggggtagagttcttcagaaggcagtatatg
ctttgaatcagcgctcgatatatggtacagtttcacccatagccaggatt
catgggtccaggaatcaaggggtgaaaaagggaatagttccacttactat
cactcctagtgaccctctaggaaaatttttgcttcctgtccccataactc
taggttctgctggcctagaagttttggctccagagaggggagtgctcctt
ccaggagctacaacaaacattccattgaactggaagctcagacttccccc
tggtcattttgggcttctaatgcccttaaaccaacaggctaaaaaaggaa
taacagtgttaggaggggtgatagatccagattaccatggggaaattgga
ttacctcttcacaatggtggtaagcaagattatgtctggagtttaggaga
tcccttagggcgtctcttagtactaccatgtcctgtgattaaagtcaatg
ggaaactacaacagcctaatccaagcaggatgacaaaggacacagaccca
tcaggaatgaaggtatgggtcaatcctccaggaaaagagccaagacctgc
tgaggtgctggctgaaggtgaaggaaatacagaatgggtagtagaggaag
gtagttataaataccaattaaggccacgtaaccagttgcagaaacgagga
ttataaagtaatatgaatgcccccttgtaaattgacaaatgcgtttgcga
ttgtacgagggatagttatatcatgttaggcgtattcacaaccttgttat
tgtttcaggtgaacatgagatattatttgtgtcaagttgacaggggtgga
ttgtagtggttattcctggttgtcaacttgacttatatttggaatgacta
caattcaagaattggaaagctcacaggtgaccctatcctggaggcttgaa
agaccttatctggaatcttgggtataggagaatcctgagccataagtgcc
tatgggaatccagaagattgaatcacggagttcaggaaccaccctttaac
ctgggctaccgctttcatcttggaaataagggtgtgggtgggaaact
gaattccctatgtttgttgatcagatgtgcatttctctttctgtttacct
ctgaggtcttatatccgttcatctaaaggctttctgaaagagagtggctg
aggtgtaagatgttctacaacagtggttctcaacaaccccatgtggggtc
aaagggcactttcataggggtcacataccagatatcctgcatatcagaca
tttacttcacaattcacaacagtagtagaattacagttatgaagtagcaa
caaaaataattttatggttggggccaccacaacagaatgaactgtattag
agagtcacagtattgggaaggttgaaccactactcttggggcttaataag
aggcagctaggctggcttttctgcattgtattatagttttaaatggtggc
ttgtagaatcagacttctataaattaaagttcaatattctgactttctga
ctgttgccctgaataaatagtctgtcttggttttcttatctgtaaaagat
gagtaatcagccaggcagtggtggcacacacctttaatccctgcacttgg
gaggcagaggcaggcagatttctgagttcaaggccagcctggtctacaga
gtgagttccaggacagtcagggctgcacagaaaaacactatcttgaaaaa
aaccaaaccaaactaaactaaacaaaacaaaaaaacaaacaacaacaaca
aaaaaggagtagtcttacctaccttgcaggagtgttgttaagaatctgta
acaatatcaacatacatttcttagtgcagagagtggataaacctcagtta
gtgtgaactttgtcactctcagtttttcccagtaaccttttgcatgtttt
cagaaacattttgtccctaccccagttcatcaacttcaatttgttcttac
agatcagccaaatgggcagacgacacggttggcagagcttggaccaacat
tctggcagcaaagaaccaaaagaaacctccttgggatgaagttcagccag
tcacagccggaacaaccggagtcccttggtgtcctgctcatgctcgttgg
gtggcaagctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_36043698_36044734
seq2: B6Ng01-237K21.g_68_1128

seq1  GAATTCCCTATGTTTGTTGATCAGATGTGCATTTCTCTTTCTGTTTACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTATGTTTGTTGATCAGATGTGCATTTCTCTTTCTGTTTACCT  50

seq1  CTGAGGTCTTATATCCGTTCATCTAAAGGCTTTCTGAAAGAGAGTGGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGTCTTATATCCGTTCATCTAAAGGCTTTCTGAAAGAGAGTGGCTG  100

seq1  AGGTGTAAGATGTTCTACAACAGTGGTTCTCAACAACCCCATGTGGGGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTAAGATGTTCTACAACAGTGGTTCTCAACAACCCCATGTGGGGTC  150

seq1  AAAGGGCACTTTCATAGGGGTCACATACCAGATATCCTGCATATCAGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGCACTTTCATAGGGGTCACATACCAGATATCCTGCATATCAGACA  200

seq1  TTTACTTCACAATTCACAACAGTAGTAGAATTACAGTTATGAAGTAGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTCACAATTCACAACAGTAGTAGAATTACAGTTATGAAGTAGCAA  250

seq1  CAAAAATAATTTTATGGTTGGGGCCACCACAACAGAATGAACTGTATTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATAATTTTATGGTTGGGGCCACCACAACAGAATGAACTGTATTAG  300

seq1  AGAGTCACAGTATTGGGAAGGTTGAACCACTACTCTTGGGGCTTAATAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCACAGTATTGGGAAGGTTGAACCACTACTCTTGGGGCTTAATAAG  350

seq1  AGGCAGCTAGGCTGGCTTTTCTGCATTGTATTATAGTTTTAAATGGTGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGCTAGGCTGGCTTTTCTGCATTGTATTATAGTTTTAAATGGTGGC  400

seq1  TTGTAGAATCAGACTTCTATAAATTAAAGTTCAATATTCTGACTTTCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGAATCAGACTTCTATAAATTAAAGTTCAATATTCTGACTTTCTGA  450

seq1  CTGTTGCCCTGAATAAATAGTCTGTCTTGGTTTTCTTATCTGTAAAAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGCCCTGAATAAATAGTCTGTCTTGGTTTTCTTATCTGTAAAAGAT  500

seq1  GAGTAATCAGCCAGGCAGTGGTGGCACACACCTTTAATCCCTGCACTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAATCAGCCAGGCAGTGGTGGCACACACCTTTAATCCCTGCACTTGG  550

seq1  GAGGCAGAGGCAGGCAGATTTCTGAGTTCAAGGCCAGCCTGGTCTACAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGAGGCAGGCAGATTTCTGAGTTCAAGGCCAGCCTGGTCTACAGA  600

seq1  GTGAGTTCCAGGACAGTCAGGGCTGCACAGAAAAACACTATCTTGAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTTCCAGGACAGTCAGGGCTGCACAGAAAAACACTATCTTGAAAAA  650

seq1  AACCAAACCAAACTAAACTAAACAAAACAAAAAAACAAACAACAACAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAACCAAACTAAACTAAACAAAACAAAAAAACAAACAACAACAACA  700

seq1  AAAAAGGAGTAGTCTTACCTACCTTGCAGGAGTGTTGTTAAGAATCTGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGAGTAGTCTTACCTACCTTGCAGGAGTGTTGTTAAGAATCTGTA  750

seq1  ACAATATCAACATACATTTCTTAGTGCAGAGAGTGGAT-AACCTCAGTTA  799
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ACAATATCAACATACATTTCTTAGTGCAGAGAGTGGATAAACCTCAGTTA  800

seq1  GTGTGAACTTTGTCACTCTCAGTTTTTCCCAGTAACC-TTTGCATG-TTT  847
      ||||||||||||||||||||||||||||||||||||| |||||||| |||
seq2  GTGTGAACTTTGTCACTCTCAGTTTTTCCCAGTAACCTTTTGCATGTTTT  850

seq1  CAGAAACA-TTTGTCCCTACCCCAG-TCATCAAACTTCAA-TTGTTCTTA  894
      |||||||| |||||||||||||||| ||||| |||||||| |||||||||
seq2  CAGAAACATTTTGTCCCTACCCCAGTTCATC-AACTTCAATTTGTTCTTA  899

seq1  CAGATCAGCCAAAT-GGCAGACGACACGG-TGGCAGAGC-TGGACCAGCA  941
      |||||||||||||| |||||||||||||| ||||||||| ||||||| ||
seq2  CAGATCAGCCAAATGGGCAGACGACACGGTTGGCAGAGCTTGGACCAACA  949

seq1  -TCTGGCAGCAAAGA--CCAAAGAA--CTCCTT-GGATGAAAGTCAG-CA  984
       ||||||||||||||  | ||||||  |||||| |||||||  |||| ||
seq2  TTCTGGCAGCAAAGAACCAAAAGAAACCTCCTTGGGATGAAGTTCAGCCA  999

seq1  GTCACAGCCGG-ACA--CCGAGTCC---TGTGT-CTGCTCATGC-CG-TG  1025
      ||||||||||| |||  | ||||||    |||| |||||||||| || ||
seq2  GTCACAGCCGGAACAACCGGAGTCCCTTGGTGTCCTGCTCATGCTCGTTG  1049

seq1  GGTGGCAAGCTC  1037
      ||||||||||||
seq2  GGTGGCAAGCTC  1061