BAC Information

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BAC

Clone NameB6Ng01-237N04
Chromosome2 (Build37)
Map Location 63,634,138 - 63,756,890
singlet/doubletdoublet
Overlap genenone
Upstream geneKcnh7, EG667257
Downstream geneFign, LOC620544, LOC667291, Grb14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-237N04.bB6Ng01-237N04.g
ACCGA048680GA048681
length1,1461,069
definitionB6Ng01-237N04.b B6Ng01-237N04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,755,752 - 63,756,890)(63,634,138 - 63,635,228)
sequence
gaattcagaaatggacaaatctgttgttgctgtccgtgtcatacttcctt
gtatttcagtctaaccgtactgcttcttttcttggcttcccatcaccttt
ggaaacaactgtatccaacctttcaaactgaatgactgggatagctatta
gacacttaaacattttagacaccgaagcttattgtgatgtgttactataa
tttatggggaaagatttcaactggtaatttatttaggttccacattttct
atgttttcctgtgttagatatggctttatgatggctttagaaaacagatt
caaatcttgtctctgagaattacaagctgtaagatcatggaaaagcaagt
ctttgtaaacctgaaatgtttgctgtcagtatgtgaaagatggccatgtg
ttcaccagttgtgagctttaccaaatcaaataatggcatgaatagattag
tgcaatgtctgtcaataaatacacttggaaaaattaattactcctccctc
ttggttacttagtgctgtgacgagctgcctggtaagaagccatttaaggc
aagatagttcattttgtaatagtttgagggtgtagtctattatggagaga
aaggctaggcagtgagagtggctctggcttttgtaatatcatgtcagttt
ttgtgcgataaaaagatgaaaaagaatttctcattcatttgatcactgag
ttatctgtcttcaagaaatctgtagcctctaaaatgtaaaagctgaaagt
ttggcattcttaccttgcattcatcatgagcatagtttaacattctagtg
gtcaagcttgtctatattattattatacatagctcagcaccagtccttaa
atccaaatccttcttgagatacagcattttgaatactttgaatcttaatg
tgggacacctacatttttcatactaatctgaaagcacccctgaccacgta
ttaaattgaacaggactgtctatttcaattgtgggtattgggggatttag
actgcttacaaatgaagtcccattgattacgtcactggttatcatttcag
ggatgttgtaagttcctgagctctgaatttgccctccctgggggcgatca
ttcttctctggtaccctaaccttgctttcagtgaatttaaatttgc
gaattcataggttaagcagaacctattgtatgtctggtttctccagaact
gcagaaccaatagggtgtgaagaaataaattaaaaattcattgacatatc
actattgaaagtatgaggaatttagtaacttgagaaacttcctaaaattt
gttttaaaactgggttaatgtcctaaaagtcttaaattatttaataaagt
ataatttcattttatatttattaagctgcccatcaataaatgctctttgg
aagaaatagtaatctctaggctgaccaaacttaaattgtacatatttgca
aagattgcaatattgagtatcacatatttataaagatagttttgaaagcc
ttatttaagcttgatttttttttcatatagctggtttttaccatttttga
cagtagttgccagatggcatgactccttcccaacccttcatagtctggaa
ctctgaataaccccacaccaggatcctgtatcctcttgcttttctgagag
ttgatctggacatgctctgatgaagacttatagtgcaggattacttgaaa
tgactggttcaaaggaagaaattgttttgccaattttcttggttaaagtt
agagttgatagacactgttatgcagagtttttaattataaacagtaatta
ctactgtcaccgagacatacatggaatcgggagctttaatgaggagatct
gaaattgtattcgatacaaacatgtaatttttcaataatcaaaaatgtag
acaaatgagtagaaaaaccttcagggtgaactcacagacataggaagaca
gagcacacatacctcctctttcaacactcagccaagtagttcaacatgta
tagaacataacctgtgatttaaaaaaaaagaagagagagattttattatt
tttgaaaaagtgagggatggaaagaagaaaagaagtagagagccagagga
tgaaagatgagttgatgagaccagagatgattgttttttaaaagagagag
ccataaagggaatgaaagagtagaatatttactgggcactgcttaataac
ttaattttaattatcctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_63755752_63756890
seq2: B6Ng01-237N04.b_49_1194 (reverse)

seq1  GCAAATTTAAAAATCCTG-AAGCAA-GTTAGGGTCACAGAGAAGAGTGAT  48
      |||||||||||    ||| |||||| ||||||||  ||||||||| ||||
seq2  GCAAATTTAAATTCACTGAAAGCAAGGTTAGGGTACCAGAGAAGAATGAT  50

seq1  CGCCCCAAGGGAAGGGCAAAATCAGAGCTCA-GAACTTTTCACATCCCTG  97
      |||||| |||| |||||||| |||||||||| ||||||   |||||||||
seq2  CGCCCCCAGGG-AGGGCAAATTCAGAGCTCAGGAACTTACAACATCCCTG  99

seq1  AAATGATACCATGTGACCTAATCAAT-GGACTTCATTTGTAAGCAGTCTA  146
      |||||||| |  ||||| |||||||| |||||||||||||||||||||||
seq2  AAATGATAACCAGTGACGTAATCAATGGGACTTCATTTGTAAGCAGTCTA  149

seq1  A--TCCCCAATACCCACAATTGAAATAGACAGTCCTGTTCAA-TTAATAC  193
      |   |||||||||||||||||||||||||||||||||||||| |||||||
seq2  AATCCCCCAATACCCACAATTGAAATAGACAGTCCTGTTCAATTTAATAC  199

seq1  GTGGTCA-GGGTGCTTTCAGATTTAGTATTGAAAAATGTAGGTGTTCCAC  242
      ||||||| ||||||||||||| |||||| |||||||||||||||| ||||
seq2  GTGGTCAGGGGTGCTTTCAGA-TTAGTA-TGAAAAATGTAGGTGTCCCAC  247

seq1  ATTAAGATTC-AAGTATTC-AAATGCTGTATCTC-AGGAGGATTTGGATT  289
      |||||||||| |||||||| |||||||||||||| || ||||||||||||
seq2  ATTAAGATTCAAAGTATTCAAAATGCTGTATCTCAAGAAGGATTTGGATT  297

seq1  TAAGGACTGGTGCTGAGCTATGTATAATAATAATATAGACAAGCTTGACC  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGACTGGTGCTGAGCTATGTATAATAATAATATAGACAAGCTTGACC  347

seq1  ACTAGAATGTTAAACTATGCTCATGATGAATGCAAAGGTAAGAATGCCAA  389
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ACTAGAATGTTAAACTATGCTCATGATGAATGC-AAGGTAAGAATGCCAA  396

seq1  ACTTTCAGCTTTTACATTTTAGAGGCTACAGATTTCTTGAAGACAGATAA  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCAGCTTTTACATTTTAGAGGCTACAGATTTCTTGAAGACAGATAA  446

seq1  CTCAGTGATCAAATGAATGAGAAATTCTTTTTCATCTTTTTATCGCACAA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTGATCAAATGAATGAGAAATTCTTTTTCATCTTTTTATCGCACAA  496

seq1  AAACTGACATGATATTACAAAAGCCAGAGCCACTCTCACTGCCTAGCCTT  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGACATGATATTACAAAAGCCAGAGCCACTCTCACTGCCTAGCCTT  546

seq1  TCTCTCCATAATAGACTACACCCTCAAACTATTACAAAATGAACTATCTT  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCATAATAGACTACACCCTCAAACTATTACAAAATGAACTATCTT  596

seq1  GCCTTAAATGGCTTCTTACCAGGCAGCTCGTCACAGCACTAAGTAACCAA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTAAATGGCTTCTTACCAGGCAGCTCGTCACAGCACTAAGTAACCAA  646

seq1  GAGGGAGGAGTAATTAATTTTTCCAAGTGTATTTATTGACAGACATTGCA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGGAGTAATTAATTTTTCCAAGTGTATTTATTGACAGACATTGCA  696

seq1  CTAATCTATTCATGCCATTATTTGATTTGGTAAAGCTCACAACTGGTGAA  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCTATTCATGCCATTATTTGATTTGGTAAAGCTCACAACTGGTGAA  746

seq1  CACATGGCCATCTTTCACATACTGACAGCAAACATTTCAGGTTTACAAAG  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGCCATCTTTCACATACTGACAGCAAACATTTCAGGTTTACAAAG  796

seq1  ACTTGCTTTTCCATGATCTTACAGCTTGTAATTCTCAGAGACAAGATTTG  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCTTTTCCATGATCTTACAGCTTGTAATTCTCAGAGACAAGATTTG  846

seq1  AATCTGTTTTCTAAAGCCATCATAAAGCCATATCTAACACAGGAAAACAT  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGTTTTCTAAAGCCATCATAAAGCCATATCTAACACAGGAAAACAT  896

seq1  AGAAAATGTGGAACCTAAATAAATTACCAGTTGAAATCTTTCCCCATAAA  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATGTGGAACCTAAATAAATTACCAGTTGAAATCTTTCCCCATAAA  946

seq1  TTATAGTAACACATCACAATAAGCTTCGGTGTCTAAAATGTTTAAGTGTC  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGTAACACATCACAATAAGCTTCGGTGTCTAAAATGTTTAAGTGTC  996

seq1  TAATAGCTATCCCAGTCATTCAGTTTGAAAGGTTGGATACAGTTGTTTCC  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGCTATCCCAGTCATTCAGTTTGAAAGGTTGGATACAGTTGTTTCC  1046

seq1  AAAGGTGATGGGAAGCCAAGAAAAGAAGCAGTACGGTTAGACTGAAATAC  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTGATGGGAAGCCAAGAAAAGAAGCAGTACGGTTAGACTGAAATAC  1096

seq1  AAGGAAGTATGACACGGACAGCAACAACAGATTTGTCCATTTCTGAATTC  1139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGTATGACACGGACAGCAACAACAGATTTGTCCATTTCTGAATTC  1146

seq1: chr2_63634138_63635228
seq2: B6Ng01-237N04.g_69_1137

seq1  GAATTCATAGGTTAAGCAGAACCTATTGTATGTCTGGTTTCTCCAGAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGGTTAAGCAGAACCTATTGTATGTCTGGTTTCTCCAGAACT  50

seq1  GCAGAACCAATAGGGTGTGAAGAAATAAATTAAAAATTCATTGACATATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAACCAATAGGGTGTGAAGAAATAAATTAAAAATTCATTGACATATC  100

seq1  ACTATTGAAAGTATGAGGAATTTAGTAACTTGAGAAACTTCCTAAAATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTGAAAGTATGAGGAATTTAGTAACTTGAGAAACTTCCTAAAATTT  150

seq1  GTTTTAAAACTGGGTTAATGTCCTAAAAGTCTTAAATTATTTAATAAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAAAACTGGGTTAATGTCCTAAAAGTCTTAAATTATTTAATAAAGT  200

seq1  ATAATTTCATTTTATATTTATTAAGCTGCCCATCAATAAATGCTCTTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTCATTTTATATTTATTAAGCTGCCCATCAATAAATGCTCTTTGG  250

seq1  AAGAAATAGTAATCTCTAGGCTGACCAAACTTAAATTGTACATATTTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATAGTAATCTCTAGGCTGACCAAACTTAAATTGTACATATTTGCA  300

seq1  AAGATTGCAATATTGAGTATCACATATTTATAAAGATAGTTTTGAAAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTGCAATATTGAGTATCACATATTTATAAAGATAGTTTTGAAAGCC  350

seq1  TTATTTAAGCTTGATTTTTTTTTCATATAGCTGGTTTTTACCATTTTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTAAGCTTGATTTTTTTTTCATATAGCTGGTTTTTACCATTTTTGA  400

seq1  CAGTAGTTGCCAGATGGCATGACTCCTTCCCAACCCTTCATAGTCTGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGTTGCCAGATGGCATGACTCCTTCCCAACCCTTCATAGTCTGGAA  450

seq1  CTCTGAATAACCCCACACCAGGATCCTGTATCCTCTTGCTTTTCTGAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAATAACCCCACACCAGGATCCTGTATCCTCTTGCTTTTCTGAGAG  500

seq1  TTGATCTGGACATGCTCTGATGAAGACTTATAGTGCAGGATTACTTGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCTGGACATGCTCTGATGAAGACTTATAGTGCAGGATTACTTGAAA  550

seq1  TGACTGGTTCAAAGGAAGAAATTGTTTTGCCAATTTTCTTGGTTAAAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGGTTCAAAGGAAGAAATTGTTTTGCCAATTTTCTTGGTTAAAGTT  600

seq1  AGAGTTGATAGACACTGTTATGCAGAGTTTTTAATTATAAACAGTAATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTGATAGACACTGTTATGCAGAGTTTTTAATTATAAACAGTAATTA  650

seq1  CTACTGTCACCGAGACATACATGGAATCGGGAGCTTTAATGAGGAGATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGTCACCGAGACATACATGGAATCGGGAGCTTTAATGAGGAGATCT  700

seq1  GAAATTGTATTCGATACAAACATGTAATTTTTCAATAATCAAAAATGTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTGTATTCGATACAAACATGTAATTTTTCAATAATCAAAAATGTAG  750

seq1  ACAAATGAGTAGAAAAACCTTCAGGGTGAACTCACAGACATAGGAAGACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGAGTAGAAAAACCTTCAGGGTGAACTCACAGACATAGGAAGACA  800

seq1  GAGCACACATACCTCCTCTTTCAACACTCAGCCAAGTAGTTCAACATGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACACATACCTCCTCTTTCAACACTCAGCCAAGTAGTTCAACATGTA  850

seq1  TAGAACATAACCTGTGATTTAAAAAAAAAGAAGAAGAAGAAGATTTTATT  900
      ||||||||||||||||||||||||||||||||| |||   ||||||||||
seq2  TAGAACATAACCTGTGATTTAAAAAAAAAGAAG-AGA--GAGATTTTATT  897

seq1  ATTTTTGAAAAAGTGAGGGATGGAAAGAGAAAAAGAAAGTAAGAGAGGCG  950
      ||||||||||||||||||||||||||||  ||||| |||| ||||| || 
seq2  ATTTTTGAAAAAGTGAGGGATGGAAAGAAGAAAAG-AAGT-AGAGA-GCC  944

seq1  AGAAGGAATGAAAGATGAAGTTGATGAAGACAAGAAGATGGATGTTTTTT  1000
      |||  | |||||||||| |||||||| |||| || |||||  ||||||||
seq2  AGA--GGATGAAAGATG-AGTTGATG-AGACCAG-AGATGATTGTTTTTT  989

seq1  AAAAAGAAGAG-GAGCCATAAAAAGGGAAAGGAAAAGAAGTAGAAATATT  1049
      ||    ||||| |||||||  |||||||| |  |||| ||||| ||||||
seq2  AA----AAGAGAGAGCCAT--AAAGGGAATG--AAAG-AGTAG-AATATT  1029

seq1  TACTGGGCACTTGCTTATATACTTATTTTAAATTATCTCTCT  1091
      |||||||||| ||||||   ||||| ||| ||||||| ||||
seq2  TACTGGGCAC-TGCTTAATAACTTAATTTTAATTATC-CTCT  1069