MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-237P04
Chromosome	2 (Build37)
Map Location	10,154,642 - 10,194,874
singlet/doublet	doublet
Overlap gene	Itih5
Upstream gene	LOC100040710, LOC100040548, LOC100040566, Gata3, LOC100040768, 4930412O13Rik, Taf3, Atp5c1, Kin, Itih2
Downstream gene	Sfmbt2, LOC100040690, LOC100040703, LOC667192, Prkcq
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100040710 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040710
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	LOC100040548 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040548
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100040566 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040566
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Gata3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14462 MGI:95663
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040768 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040768
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 12 ESTs

name	4930412O13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381347 MGI:1921185
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs

name	Taf3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:209361 MGI:2388097
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp5c1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11949 MGI:1261437
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kin (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16588 MGI:96676
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Itih2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16425 MGI:96619
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Itih5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:209378 MGI:1925751
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sfmbt2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:353282 MGI:2447794
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040690 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040690
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	LOC100040703 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040703
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC667192 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667192
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 7 Proteins pseudo : _no_value

name	Prkcq (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18761 MGI:97601
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040710 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149248880 GeneID:100040710
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040710, transcript variant 1 transcript_id : XM_001475168.1

name	LOC100040710 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149248878 GeneID:100040710
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : hypothetical protein LOC100040710, transcript variant 2 transcript_id : XM_001475191.1

name	LOC100040566 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149248872 GeneID:100040566
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to Ubtf protein transcript_id : XM_001474917.1

name	Gata3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254638 GeneID:14462 MGI:95663
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GATA binding protein 3 transcript_id : NM_008091.2

name	LOC100040768 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149248888 GeneID:100040768
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 12 ESTs product : similar to Ubtf protein transcript_id : XM_001475284.1

name	Taf3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142362642 GeneID:209361 MGI:2388097
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor transcript_id : NM_027748.2

name	Atp5c1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368640 GeneID:11949 MGI:1261437
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 transcript_id : NM_020615.3

name	Kin (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130378 GeneID:16588 MGI:96676
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : antigenic determinant of rec-A protein transcript_id : NM_025280.2

name	Itih2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803557 GeneID:16425 MGI:96619
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : inter-alpha trypsin inhibitor, heavy chain 2 transcript_id : NM_010582.2

name	Itih5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124286821 GeneID:209378 MGI:1925751
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : inter-alpha (globulin) inhibitor H5 transcript_id : NM_172471.2

name	Sfmbt2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348084 GeneID:353282 MGI:2447794
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Scm-like with four mbt domains 2 transcript_id : NM_177386.4

name	Prkcq (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130636 GeneID:18761 MGI:97601
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein kinase C, theta transcript_id : NM_008859.2

name	LOC100040710 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149248879 GeneID:100040710
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001475241.1

name	LOC100040710 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149248881 GeneID:100040710
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001475218.1

name	LOC100040566 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149248873 GeneID:100040566
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474967.1

name	Gata3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679951 CCDS:CCDS15674.1 GeneID:14462 MGI:95663
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0016563 - transcriptional activator activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0001709 - cell fate determination [Evidence IDA]; GO:0042421 - norepinephrine biosynthesis [Evidence IMP]; GO:0045893 - positive regulation of transcription, DNA-dependent [Evidence IDA]; GO:0042035 - regulation of cytokine biosynthesis [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0048485 - sympathetic nervous system development [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : GATA-binding protein 3 product : GATA binding protein 3 protein_id : NP_032117.1

name	LOC100040768 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149248889 GeneID:100040768
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475334.1

name	Taf3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:74315971 CCDS:CCDS15675.1 GeneID:209361 MGI:2388097
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005669 - transcription factor TFIID complex [Evidence ISS] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003702 - RNA polymerase II transcription factor activity [Evidence TAS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0006366 - transcription from RNA polymerase II promoter [Evidence TAS] codon_start : 1 exception : mismatches in translation note : RNA polymerase II transcription factor, TFIID subunit; TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa product : TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor protein_id : NP_082024.1

name	Atp5c1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11602916 GeneID:11949 MGI:1261437
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0016469 - proton-transporting two-sector ATPase complex [Evidence IEA] GO_function : GO:0015078 - hydrogen ion transporter activity [Evidence IEA]; GO:0046933 - hydrogen-transporting ATP synthase activity, rotational mechanism [Evidence IEA]; GO:0046961 - hydrogen-transporting ATPase activity, rotational mechanism [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0006754 - ATP biosynthesis [Evidence IEA]; GO:0015986 - ATP synthesis coupled proton transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0015992 - proton transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : ATP synthase gamma-subunit gene encoding a mitochondrial protein; F1 gamma product : ATP synthase, H+ transporting, mitochondrial F1 complex, gamma subunit protein_id : NP_065640.1

name	Kin (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859684 CCDS:CCDS15676.1 GeneID:16588 MGI:96676
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : KIN, antigenic determinant of recA protein homolog product : antigenic determinant of rec-A protein protein_id : NP_079556.1

name	Itih2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754384 CCDS:CCDS15677.1 GeneID:16425 MGI:96619
definition	GO_function : GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]; GO:0004867 - serine-type endopeptidase inhibitor activity [Evidence IEA] GO_process : GO:0030212 - hyaluronan metabolism [Evidence IEA] codon_start : 1 product : inter-alpha trypsin inhibitor, heavy chain 2 protein_id : NP_034712.1

name	Itih5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369644 CCDS:CCDS15678.1 GeneID:209378 MGI:1925751
definition	GO_function : GO:0004867 - serine-type endopeptidase inhibitor activity [Evidence IEA] GO_process : GO:0030212 - hyaluronan metabolism [Evidence IEA] codon_start : 1 note : inter-alpha trypsin inhibitor heavy chain precursor 5 product : inter-alpha (globulin) inhibitor H5 protein_id : NP_766059.1

name	Sfmbt2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:91206402 GeneID:353282 MGI:2447794
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA] codon_start : 1 note : Scm-related gene containing four mbt domain 2 product : Scm-like with four mbt domains 2 protein_id : NP_796360.2

name	Prkcq (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679353 CCDS:CCDS15682.1 GeneID:18761 MGI:97601
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0001772 - immunological synapse [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004697 - protein kinase C activity [Evidence IDA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0051092 - activation of NF-kappaB transcription factor [Evidence ISS]; GO:0007242 - intracellular signaling cascade [Evidence IMP]; GO:0045086 - positive regulation of interleukin-2 biosynthesis [Evidence IMP]; GO:0050870 - positive regulation of T cell activation [Evidence IMP]; GO:0042102 - positive regulation of T cell proliferation [Evidence IMP]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA] codon_start : 1 note : PKC theta product : protein kinase C, theta protein_id : NP_032885.1

name	LOC100040548 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040548
definition	number : 1 pseudo : _no_value

name	LOC100040690 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040690
definition	number : 3 pseudo : _no_value

name	LOC100040690 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040690
definition	number : 2 pseudo : _no_value

name	LOC100040690 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040690
definition	number : 1 pseudo : _no_value

name	LOC100040703 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040703
definition	number : 1 pseudo : _no_value

name	LOC100040703 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040703
definition	number : 2 pseudo : _no_value

name	4930412O13Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149248886 GeneID:381347 MGI:1921185
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs product : RIKEN cDNA 4930412O13 gene transcript_id : XR_035727.1

name	LOC667192 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149248893 GeneID:667192
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 7 Proteins product : similar to zinc finger and BTB domain containing 2 pseudo : _no_value transcript_id : XR_032260.1

clone name	MSMg01-336P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-205N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522N22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-161A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504L24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-397N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500M13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-147D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545L21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-072P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237A21
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-237P04.b	B6Ng01-237P04.g
ACC	GA048773	GA048774
length	1,149	996
definition	B6Ng01-237P04.b	B6Ng01-237P04.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(10,154,642 - 10,155,802)	(10,193,878 - 10,194,874)
sequence	gaattctcctcgtgtgtctcactgggaaccaaacaatagcaaaggcatca agcatcagctctactccgttctgagcatagttcatcttgttcctgattta ataatgttcatgaaggatgaggcaggcttgtcatcccagttctactgatg ggataacttcggggcagccatgttccttcccagggctgaaccaagggtaa ataatgtgcccagggtccttgctatggcacgtatgcaatgcatattctta acttcatactgggtttctttaaacatctgatgacagtactcatgagacat ggcagtgtttgtcacaaatcctcctctccccctcgctcccctcccctcct tcctatttgctccccctttcccactaactctctctccactttcaggaaca acgtcttaccatatgaccttagcctcagtcctggcactaccactgggttc tgggattacaagtgtgtagcaccatgcccagtttcagattcatttcctta tagcatatccccatgtcactctggttcagagagtttgtaatattttaaaa tcccacaacagcacccaaagaaatgactcagtggataaagattcttccca ccaaacctgataagctgagttccaaccctggggtccatatgatgggagga gagaactacgcacacaaattgtcctttgacctctacacttgacattgcat gagaacacacaccttatccccacacacaaacaaatacatgtaataaaatc tctgaaaagataataatgtcttagtcattgttctattgctgtgaagagac accatgaccatggcaactcttataaaagaaaacatttaattggggctgac ttacagttcagaggtttagtccactctcatcatggcaggaagcatggtgg cagacagacagacagacgcggtgctggagagaagctgatcatctacatcc tgatctgtagcagcagaagagagctactagcctagcttgagcttttgaaa cctcggatcctacccacagtaaccacacttcctcgatgaagtcacaccta ctcatgagtcacacttacttcatgagtcacaggcttctgtagttcaatga tggccactccctatgagtcaatgggaccattttcactcaactacataaa	gaattcattcatcctttgttgtataccgggcttgaggccttgaaccgggt acacctgggaggcaggctggggctgaaaaagacttagacagcgagagaaa taatggaaccaagacaaaggtcctgatcaaggcccgagattttactcgga aactgtgcttataaagggggaagatacatctctcctccccccccccccgc cccgcccccgccagtccattcttggtgtctggagccagcctgcgggtgac atgcaggataggatgttcctctggaatatctcaggggcctctcagcaaga agcagcgtcttggaggagagcagtggcaggtgacagaacaatagagccat ctaggtcggaaggctccaccttaggtaattcccttcttagtggcagcaag gtcaaagtctggatcagcctgcttcagggctaagggaggctacaatcctt tagttcaatgattagtcagctccgtcagcattattattggctaatctttc cacatgtctagtagatgaaatcacctcatctcccaaaatatgctgatccc tgtcctggggatttctgttgctatgacaaaatatcttgacaaaaaaaaaa accaatttaaggaaggaagagtttactctggctcacaattccacgttaga atctatcatcacagcgaagccaaggcagcaaggtaagatttaaaacagct ggtcacgtgacatccacatcaagagcagaaaatgaatgtatgcacactga ttctcagctcactgtctattactctttcacagttcagaacccaagcccag gggaatggtgcctcccacagtgggctaggccttcctacatagagtcattt taattaggacaatctccaacagacataccctcaggctaatctcatctaga cactgccttattgggaatcttattcttaggtcattctagactgtgcagtt aacaggttgaatgaccattacaaagttccatcctcagtatttggat
quality values	Open. Hide. 58 31 29 25 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 56 47 62 62 62 49 44 59 44 59 47 62 43 43 34 28 32 40 25 28 43 51 62 62 59 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 54 54 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 59 62 59 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 54 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 52 58 53 58 58 58 58 58 58 54 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 54 54 58 49 58 58 58 54 58 53 58 58 54 54 58 58 54 58 58 52 58 58 58 47 58 54 54 52 58 58 58 45 47 54 58 58 58 46 34 58 58 58 58 58 58 40 52 45 41 39 58 58 58 58 58 58 58 53 53 51 50 58 58 58 58 39 58 51 50 51 50 51 58 58 58 49 58 58 58 58 50 49 51 42 50 54 54 58 58 50 58 58 58 53 39 58 51 27 36 33 58 49 40 51 46 58 52 58 53 58 52 54 40 58 41 50 51 54 53 53 52 50 58 44 33 36 37 58 50 52 49 38 53 42 51 58 50 53 38 40 32 58 49 50 47 50 51 50 54 28 49 50 50 52 54 54 54 53 54 51 54 38 50 47 54 54 54 54 39 54 41 54 53 53 54 54 37 54 33 49 39 39 35 54 37 52 54 41 44 44 52 32 36 54 36 42 53 54 42 52 38 44 54 54 54 40 34 30 53 45 39 52 52 40 54 35 46 36 30 42 23 51 52 37 36 32 45 35 41 42 40 45 52 36 47 33 52 52 45 52 53 39 21 33 28 33 32 29 20 31 32 31 46 29 16 21 26 32 31 47 28 28 33 45 53 39 42 31 31 34 41 51 51 35 31 51 47 47 31 31 29 29 51 28 31 41 21 38 38 46 47 51 31 31 26 18 12 31 32 29 43 26 26 38 30 32 26 17 46 11 41 30 47 23 29 29 25 23 33 28 30 43 31 31 31 21 33 33 26 28 30 31 32 27 27 19 32 31 16 26 26 31 33 31 29 33 30 27 30 15 31 12 32 18 31 23 23 23 26 20 31 22 39 19 23 37 13 32 29 36 30 31 18 24 29 13 31 17 26 31 11 19 32 32 21 26 27 30 31 24 24 23 22 11 22 17 29 31 29 14 30 33 31 38 20 5 5 6 23 31 30 7 20 17 25 8 18 7 28 28 27 19 24 33 21 7 9 4 7 21 29 28 31 33 15 17 29 17 24 30 48 48 32 26 29 48 21 24 31 34 17 12 10 23 14 15 13 24 13 15 30 10 11 16 16 19 12 14 14 11 6 8 14 12 20 15 21 9 16 19 5 5 5 6 25 11 8 30 7 20 16 16 16 16 26 14 20 22 14 3 3 3 9 23 24 9 7 6 10 5 14 4 9 10 23 7 5 19 3 3 6 8 9 5 6 4 8 7 8 6 15 13 5 18 4 2 1 5 4 13 13 11 23 22 13 14 16 9 8 6 20 16 9 7 8 7 25 17 3 4 5 7 11 4 6 6 5 7 9 15 17 12 2 5 7 5 13 28 28 15 4 4 3 2 2 3 7 7 4 4 10 1 7 8 17 5	Open. Hide. 62 47 56 47 62 47 51 49 62 47 44 62 39 51 32 27 36 56 32 32 62 59 59 62 62 62 62 62 62 62 62 62 62 59 59 59 59 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 54 59 62 62 62 62 62 62 59 62 62 54 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 59 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 16 14 11 10 10 13 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 59 62 59 62 62 62 59 51 62 54 59 62 62 54 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 59 51 62 62 62 62 62 62 62 62 62 62 51 62 59 59 62 62 62 59 62 62 56 62 59 59 62 59 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 59 62 62 59 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 59 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 56 56 51 62 62 62 62 62 62 62 62 51 47 62 62 62 62 62 62 47 62 62 47 54 62 62 54 62 62 31 56 62 62 62 56 62 54 62 56 62 62 62 51 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 52 62 42 62 52 45 54 42 58 58 49 58 58 54 58 58 58 58 58 58 58 58 58 54 42 54 54 58 54 45 58 46 58 54 34 54 52 54 41 47 58 54 58 58 58 52 45 58 42 58 54 58 54 51 52 58 54 35 54 54 58 52 42 58 58 58 58 58 51 58 46 46 51 51 58 49 51 54 51 54 46 58 51 42 30 58 54 46 51 51 36 58 58 51 49 50 52 54 51 48 42 58 58 28 35 54 54 50 58 51 51 49 49 32 54 54 53 54 51 49 48 44 39 40 43 31 16 40 51 54 41 40 42 44 58 39 41 58 44 33 37 27 58 39 51 58 49 40 41 53 58 29 39 49 50 54 39 49 31 24 54 53 53 54 28 11 52 41 54 27 34 31 54 34 38 53 49 51 52 42 31 45 53 31 41 39 35 52 38 33 46 26 54 27 18 22 9 51 32 29 34 42 16 34 51 49 27 41 40 37 37 32 54 30 31 54 54 51 45 34 23 40 40 52 47 27 31 23 45 40 52 39 32 45 32 45 41 32 22 38 22 33 29 21 31 36 35 19 40 34 31 53 53 52 41 32 35 37 37 29 51 28 33 32 39 36 23 45 29 41 31 42 29 15 42 45 31 39 31 28 42 36 29 31 33 28 45 23 43 32 34 33 29 30 32 42 43 42 47 31 31 23 31 32 26 32 37 25 17 8 43 33 9 40 26 31 29 31 30 40 41 21 10 41 46 25 18 21 27 36 32 28 31 30 33 39 37 41 30 22 26 21 15 12 27 39 32 16 31 19 10 8 7 19 30 12 12 38 21 25 34 19 32 25 11 17 13 25 14 13 6 29 44 32 11 30 22 19 8 5 7 27 13 23 16 24 29 31 19 30 22 25 30 19 28 29 16 8 21 27 37 44 31 31 19 11 29 27 22 32 29 21 32 22 26 16 11 32 27 23 32 19 29 17 7 19 22 23 14 21 33 20 26 19 20 27 40 21 12 18 16 10 6 13 14 23 18 8 7 34 19 17 19 21 32 24 37 22 32 22 31 18 26 16 11 20 7 10 14 5 5 9 13 21 15 22 7 21 13 21 11 14 18 22 5 8 20 6 14 5 12 8 11 24 12 28 27 15 11 18 16 24 13 3 4 6 6 17 7 28 27 18 28 38 38 14 15 9 18

Alignment Information

BAC End 1

BAC End 2

seq1: chr2_10154642_10155802
seq2: B6Ng01-237P04.b_43_1191

seq1  GAATTCTCCTCGTGTGTCTCACTGGGAACCAAACAATAGCAAAGGCATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTCGTGTGTCTCACTGGGAACCAAACAATAGCAAAGGCATCA  50

seq1  AGCATCAGCTCTACTCCGTTCTGAGCATAGTTCATCTTGTTCCTGATTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCAGCTCTACTCCGTTCTGAGCATAGTTCATCTTGTTCCTGATTTA  100

seq1  ATAATGTTCATGAAGGATGAGGCAGGCTTGTCATCCCAGTTCTACTGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTTCATGAAGGATGAGGCAGGCTTGTCATCCCAGTTCTACTGATG  150

seq1  GGATAACTTCGGGGCAGCCATGTTCCTTCCCAGGGCTGAACCAAGGGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAACTTCGGGGCAGCCATGTTCCTTCCCAGGGCTGAACCAAGGGTAA  200

seq1  ATAATGTGCCCAGGGTCCTTGCTATGGCACGTATGCAATGCATATTCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTGCCCAGGGTCCTTGCTATGGCACGTATGCAATGCATATTCTTA  250

seq1  ACTTCATACTGGGTTTCTTTAAACATCTGATGACAGTACTCATGAGACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCATACTGGGTTTCTTTAAACATCTGATGACAGTACTCATGAGACAT  300

seq1  GGCAGTGTTTGTCACAAATCCTCCTCTCCCCCTCGCTCCCCTCCCCTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTGTTTGTCACAAATCCTCCTCTCCCCCTCGCTCCCCTCCCCTCCT  350

seq1  TCCTATTTGCTCCCCCTTTCCCACTAACTCTCTCTCCACTTTCAGGAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATTTGCTCCCCCTTTCCCACTAACTCTCTCTCCACTTTCAGGAACA  400

seq1  ACGTCTTACCATATGACCTTAGCCTCAGTCCTGGCACTACCACTGGGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCTTACCATATGACCTTAGCCTCAGTCCTGGCACTACCACTGGGTTC  450

seq1  TGGGATTACAAGTGTGTAGCACCATGCCCAGTTTCAGATTCATTTCCTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATTACAAGTGTGTAGCACCATGCCCAGTTTCAGATTCATTTCCTTA  500

seq1  TAGCATATCCCCATGTCACTCTGGTTCAGAGAGTTTGTAATATTTTAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATATCCCCATGTCACTCTGGTTCAGAGAGTTTGTAATATTTTAAAA  550

seq1  TCCCACAACAGCACCCAAAGAAATGACTCAGTGGATAAAGATTCTTCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACAACAGCACCCAAAGAAATGACTCAGTGGATAAAGATTCTTCCCA  600

seq1  CCAAACCTGATAAGCTGAGTTCCAACCCTGGGGTCCATATGATGGGAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACCTGATAAGCTGAGTTCCAACCCTGGGGTCCATATGATGGGAGGA  650

seq1  GAGAACTACGCACACAAATTGTCCTTTGACCTCTACACTTGACATTGCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACTACGCACACAAATTGTCCTTTGACCTCTACACTTGACATTGCAT  700

seq1  GAGAACACACACCTTATCCCCACACACAAACAAATACATGTAATAAAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACACACACCTTATCCCCACACACAAACAAATACATGTAATAAAATC  750

seq1  TCTGAAAAGATAATAATGTCTTAGTCATTGTTCTATTGCTGTGAAGAGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAAAGATAATAATGTCTTAGTCATTGTTCTATTGCTGTGAAGAGAC  800

seq1  ACCATGACCATGGCAACTCTTATAAAAGAAAACATTTAATTGGGGCTGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGACCATGGCAACTCTTATAAAAGAAAACATTTAATTGGGGCTGAC  850

seq1  TTACAGTTCAGAGGTTTAGTCCACTCTCATCATGGCAGGAAGCATGGTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGTTCAGAGGTTTAGTCCACTCTCATCATGGCAGGAAGCATGGTGG  900

seq1  CAGACAGACAGACAGACGCGGTGCTGGAGAGAAGCTGATCATCTACATCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGACAGACAGACGCGGTGCTGGAGAGAAGCTGATCATCTACATCC  950

seq1  TGATCTGTAGGCAGCAGGAAGAGAGCTACTAGGCCTAGCTTGAGCTTTTG  1000
      ||||||||| |||||| |||||||||||||| ||||||||||||||||||
seq2  TGATCTGTA-GCAGCA-GAAGAGAGCTACTA-GCCTAGCTTGAGCTTTTG  997

seq1  AAACCTCGGATCCTACCCACAGTAA-CACACTTCCTCCAATGAGGTCACA  1049
      ||||||||||||||||||||||||| |||||||||| | |||| ||||||
seq2  AAACCTCGGATCCTACCCACAGTAACCACACTTCCT-CGATGAAGTCACA  1046

seq1  CCTACTCCAATGAGGTCACACCTACTCCAATGAGGTCACA-GCTCCTGGT  1098
      |||||||  |||| ||||||| |||| | |||| |||||| ||| || ||
seq2  CCTACTC--ATGA-GTCACACTTACTTC-ATGA-GTCACAGGCTTCT-GT  1090

seq1  AGTTTCAAATGAT-GCCACTCCCTATGAGTCTATGGGGACCATTTTCACT  1147
      ||||   |||||| ||||||||||||||||| || |||||||||||||||
seq2  AGTT--CAATGATGGCCACTCCCTATGAGTCAAT-GGGACCATTTTCACT  1137

seq1  CAAACTACCATAAA  1161
      | ||||| ||||||
seq2  C-AACTA-CATAAA  1149

seq1: chr2_10193878_10194874
seq2: B6Ng01-237P04.g_66_1061 (reverse)

seq1  ATCCAAAATACTGGAGATTGGGACTTTGTAATGGTTCATTTCAACCTGTT  50
      |||| ||||||| |||  ||| |||||||||||| ||| |||||||||||
seq2  ATCC-AAATACT-GAGGATGGAACTTTGTAATGG-TCA-TTCAACCTGTT  46

seq1  AACTTGGCACAGTCTAGAATGACCTAAGAAT-AGATTCCCAATAA-GCAG  98
      ||||  ||||||||||||||||||||||||| ||||||||||||| ||||
seq2  AACT--GCACAGTCTAGAATGACCTAAGAATAAGATTCCCAATAAGGCAG  94

seq1  TGTCTAGATGAGATTAGCCTGAGGGTATGTCTGTTGGAGATTGTCTTAAT  148
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGTCTAGATGAGATTAGCCTGAGGGTATGTCTGTTGGAGATTGTCCTAAT  144

seq1  T-AAATGACTCTATGTAGGAAGGCCTAGCCCACTGTGGGAGGCACCATT-  196
      | ||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TAAAATGACTCTATGTAGGAAGGCCTAGCCCACTGTGGGAGGCACCATTC  194

seq1  CCCTGGGCTT-GGTTCTGAACTGTGAAAGAGTAATAGACAGTGAGCTGAG  245
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGGCTTGGGTTCTGAACTGTGAAAGAGTAATAGACAGTGAGCTGAG  244

seq1  AATCAGTGTGCATACATTCATTTTCTGCTCTTGATGTGGATGTCACGTGA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGTGTGCATACATTCATTTTCTGCTCTTGATGTGGATGTCACGTGA  294

seq1  CCAGCTGTTTTAAATCTTACCTTGCTGCCTTGGCTTCGCTGTGATGATAG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTGTTTTAAATCTTACCTTGCTGCCTTGGCTTCGCTGTGATGATAG  344

seq1  ATTCTAACGTGGAATTGTGAGCCAGAGTAAACTCTTCCTTCCTTAAATTG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAACGTGGAATTGTGAGCCAGAGTAAACTCTTCCTTCCTTAAATTG  394

seq1  GTTTTTTTTTTTGTCAAGATATTTTGTCATAGCAACAGAAATCCCCAGGA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTTTTTTGTCAAGATATTTTGTCATAGCAACAGAAATCCCCAGGA  444

seq1  CAGGGATCAGCATATTTTGGGAGATGAGGTGATTTCATCTACTAGACATG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGATCAGCATATTTTGGGAGATGAGGTGATTTCATCTACTAGACATG  494

seq1  TGGAAAGATTAGCCAATAATAATGCTGACGGAGCTGACTAATCATTGAAC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGATTAGCCAATAATAATGCTGACGGAGCTGACTAATCATTGAAC  544

seq1  TAAAGGATTGTAGCCTCCCTTAGCCCTGAAGCAGGCTGATCCAGACTTTG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGATTGTAGCCTCCCTTAGCCCTGAAGCAGGCTGATCCAGACTTTG  594

seq1  ACCTTGCTGCCACTAAGAAGGGAATTACCTAAGGTGGAGCCTTCCGACCT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGCTGCCACTAAGAAGGGAATTACCTAAGGTGGAGCCTTCCGACCT  644

seq1  AGATGGCTCTATTGTTCTGTCACCTGCCACTGCTCTCCTCCAAGACGCTG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCTCTATTGTTCTGTCACCTGCCACTGCTCTCCTCCAAGACGCTG  694

seq1  CTTCTTGCTGAGAGGCCCCTGAGATATTCCAGAGGAACATCCTATCCTGC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTGCTGAGAGGCCCCTGAGATATTCCAGAGGAACATCCTATCCTGC  744

seq1  ATGTCACCCGCAGGCTGGCTCCAGACACCAAGAATGGACTGGCGGGGGCG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCACCCGCAGGCTGGCTCCAGACACCAAGAATGGACTGGCGGGGGCG  794

seq1  GGGCGGGGGGGGGGGGAGGAGAGATGTATCTTCCCCCTTTATAAGCACAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCGGGGGGGGGGGGAGGAGAGATGTATCTTCCCCCTTTATAAGCACAG  844

seq1  TTTCCGAGTAAAATCTCGGGCCTTGATCAGGACCTTTGTCTTGGTTCCAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCGAGTAAAATCTCGGGCCTTGATCAGGACCTTTGTCTTGGTTCCAT  894

seq1  TATTTCTCTCGCTGTCTAAGTCTTTTTCAGCCCCAGCCTGCCTCCCAGGT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTCTCGCTGTCTAAGTCTTTTTCAGCCCCAGCCTGCCTCCCAGGT  944

seq1  GTACCCGGTTCAAGGCCTCAAGCCCGGTATACAACAAAGGATGAATGAAT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCCGGTTCAAGGCCTCAAGCCCGGTATACAACAAAGGATGAATGAAT  994

seq1  TC  997
      ||
seq2  TC  996

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Alignment Information