BAC Information

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BAC

Clone NameB6Ng01-239N21
Chromosome2 (Build37)
Map Location 40,615,251 - 40,616,112
singlet/doubletsinglet
Overlap geneLrp1b
Upstream geneLOC100042604, Magmas-ps, LOC666531
Downstream geneLOC100042629
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-239N21.g
ACCGA050181
length862
definitionB6Ng01-239N21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatctctgtccattcaactaggtaacagacagataagtttgcct
acatttttccaaaacttattttgtgttctttgaaaaccacagcaaataca
cttgaggtaattaaaaagcgagcctatatttttaaatgatgagttgattg
caactatatagagtgtctacctctgagagtcaaaagcactgagttcacac
tttctgatgaacagattctaattggaatcagaaggaagcagcaaaggaga
gtagaagcaactggaaatgaaaaacttgactggaatctttcccatgtgta
gcatactggcagaatatatgcattaatgttttctgactaattttattcat
ctactctaacttgaaaacagtaaatatataccacattgaacttacagtct
gtcttaagtgtgagctcattattactgagcaatagtaataaggaagactt
tcaagaagcccctaaatttgatagatgtagatttcaatatcgtattatta
ttctatatcagtttagggtgtatataaagtaatatttatctagaagtctg
tgaaaatgcatgcactgagttatccctttgtatcaattgccatactatag
ctctactacaccctagtggtgcatcttgtatgctaaagtttggatataaa
ctgtcctcactagattcatgtgttaaaggcttgcctttgggctcatatat
ccagtcattgatgggaaaatacttagtgaaggattctatataggaataat
ttccctgataaatttattatttgatggcattattggaaggaattagaatg
ttagggaggtaagaccaactcggaagagtattctctctctctctctctct
ctctctctctct
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_40615251_40616112
seq2: B6Ng01-239N21.g_68_929

seq1  GAATTCTATCTCTGTCCATTCAACTAGGTAACAGACAGATAAGTTTGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCTCTGTCCATTCAACTAGGTAACAGACAGATAAGTTTGCCT  50

seq1  ACATTTTTCCAAAACTTATTTTGTGTTCTTTGAAAACCACAGCAAATACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTTCCAAAACTTATTTTGTGTTCTTTGAAAACCACAGCAAATACA  100

seq1  CTTGAGGTAATTAAAAAGCGAGCCTATATTTTTAAATGATGAGTTGATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGGTAATTAAAAAGCGAGCCTATATTTTTAAATGATGAGTTGATTG  150

seq1  CAACTATATAGAGTGTCTACCTCTGAGAGTCAAAAGCACTGAGTTCACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTATATAGAGTGTCTACCTCTGAGAGTCAAAAGCACTGAGTTCACAC  200

seq1  TTTCTGATGAACAGATTCTAATTGGAATCAGAAGGAAGCAGCAAAGGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGATGAACAGATTCTAATTGGAATCAGAAGGAAGCAGCAAAGGAGA  250

seq1  GTAGAAGCAACTGGAAATGAAAAACTTGACTGGAATCTTTCCCATGTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAGCAACTGGAAATGAAAAACTTGACTGGAATCTTTCCCATGTGTA  300

seq1  GCATACTGGCAGAATATATGCATTAATGTTTTCTGACTAATTTTATTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACTGGCAGAATATATGCATTAATGTTTTCTGACTAATTTTATTCAT  350

seq1  CTACTCTAACTTGAAAACAGTAAATATATACCACATTGAACTTACAGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCTAACTTGAAAACAGTAAATATATACCACATTGAACTTACAGTCT  400

seq1  GTCTTAAGTGTGAGCTCATTATTACTGAGCAATAGTAATAAGGAAGACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAAGTGTGAGCTCATTATTACTGAGCAATAGTAATAAGGAAGACTT  450

seq1  TCAAGAAGCCCCTAAATTTGATAGATGTAGATTTCAATATCGTATTATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAAGCCCCTAAATTTGATAGATGTAGATTTCAATATCGTATTATTA  500

seq1  TTCTATATCAGTTTAGGGTGTATATAAAGTAATATTTATCTAGAAGTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATATCAGTTTAGGGTGTATATAAAGTAATATTTATCTAGAAGTCTG  550

seq1  TGAAAATGCATGCACTGAGTTATCCCTTTGTATCAATTGCCATACTATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATGCATGCACTGAGTTATCCCTTTGTATCAATTGCCATACTATAG  600

seq1  CTCTACTACACCCTAGTGGTGCATCTTGTATGCTAAAGTTTGGATATAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACTACACCCTAGTGGTGCATCTTGTATGCTAAAGTTTGGATATAAA  650

seq1  CTGTCCTCACTAGATTCATGTGTTAAAGGCTTGCCTTTGGGCTCATATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTCACTAGATTCATGTGTTAAAGGCTTGCCTTTGGGCTCATATAT  700

seq1  CCAGTCATTGATGGGAAAATACTTAGTGAAGGATTCTATATAGGAATAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCATTGATGGGAAAATACTTAGTGAAGGATTCTATATAGGAATAAT  750

seq1  TTCCCTGATAAATTTATTATTTGATGGCATTATTGGAAGGAATTAGAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTGATAAATTTATTATTTGATGGCATTATTGGAAGGAATTAGAATG  800

seq1  TTAGGGAGGTAAGACCAACTCGGAAGAGTATTCTCTCTCTCTCTCTCTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGAGGTAAGACCAACTCGGAAGAGTATTCTCTCTCTCTCTCTCTCT  850

seq1  CTCTCTCTCTCT  862
      ||||||||||||
seq2  CTCTCTCTCTCT  862


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