BAC Information

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BAC

Clone NameB6Ng01-240H16
Chromosome2 (Build37)
Map Location 59,313,074 - 59,313,921
singlet/doubletsinglet
Overlap genenone
Upstream geneAcvr1, LOC674940, Upp2, BC062650, Pkp4, LOC625354
Downstream gene2310032F03Rik, LOC100038999, LOC100039016, Tanc1, Wdsub1, Baz2b, LOC667103, LOC667106, Ldha-ps, LOC100039092, March7, Cd302, LOC625861, Ly75, LOC100039176, Pla2r1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-240H16.bB6Ng01-240H16.g
ACCGA050640GA050641
length8481,183
definitionB6Ng01-240H16.b B6Ng01-240H16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgggatggacagccagggccacacagagaaaccctgtctggaaa
aacaaagcaaaacaaaacaaaacaacaacaacaacaaaccaaataaactc
ataaaaaaacaacgcattgtatacatctctttgtaggcaagccatctata
accagttatgaaacaaacaaactcaaatactgactaatactcagtgacat
taaataaagacttttggggctagagcgatgatggttcagtagttaagaac
aagtttggttcccagcacccagatcaggcatcttacaaccacctgtaact
ctggctttctggggatgtgacacctctggccttcacagacacctgcactc
acatgatgtagccacatacagaagacacaggcacgcacacacgtagatat
gcacgtccttataagtaaatttcaaaaatattttaaaaggatggttcatt
ttgtataaagacatcataattctttaaaaatgatggcaataatcattact
ggaatatatacaaaggacatagatccttgcaaccaaggacagaggaaaaa
tttgagaggagtttgtgagccccgtaggaagagagttgcatgtattaaga
tggcattttcctgtgtttgcaaaaggggatgggctcaaaacaaaacaaaa
accccaccccaagacgagaaggtattggcaactgatggctgctggtagag
aaagcttccattaaatgactccagaggagctacccacactccagtggatg
gtcccccacacccatccatacacacagccctaaatagactcaatgggttt
aagaacacaggaagttgggggtggaagagggtagaagaggaaatggag
gaattccagatcctggtgatggtggccttctaaaccacaggaaggacaat
ggtggataggagggacacctacgcggagcaagcgtgggctgctcctcttc
acctcagcagtacacagaagacgctcgctcgcccctgtcagtccactgag
cttcctcatgtctgctcccagagaaactcagttcaaatggctaactgtag
tgcctacttaatagagttatgcacaggctgccgccaggctgctcagtact
cgtggtttctctcagcacttttcaccctgttgctaccctaagcctctcca
gcctgcaagcttcgcctcccttctcccagcttctggttcctaaaaaaccc
tgccatttgggccctgcgctcgcacggttctttttgtgcttctggtcccc
tgctcttggttcttctctctcacttagtcctctagactctgtggtcttct
gtcttcatctcttgtcgtctctgtgtctctctctctgtctgtctctctct
gcctctgtctgtctctctctctatctctgtctgtctctctgtctctctct
gtctctctctctctgtctctctctctctgcctctgtctctctaaatgtct
ctgtctctctctgtctctctgtctctctctctctccctctctctctctct
ctctctctgtctctctctctctcagcccggttcagtctggactcttccag
atgcctctggctgaactctccttcatatctacaataaaaaccttctccgc
aaccatacctctaggggtgggcatgtcctcattttcattcactgccccct
gcacagagctgcctactcggtctagctcagttgctgccactgtgagaaaa
cactcaccaaaacaactcttgggaggaaagggcttccgttcccttacact
tccccacagagttcatcatgggagagactcagcagggagctagaggcagg
aactgaagcgagaccatggagacgctacttactctcaagcctccgagctc
agcttagaatacacttcgtacaaagctcagcccacctacccaggatgcct
gaccctcctacacaggtagcattcagaaatgctccacagacatctaaaca
agacgctcctcactgaagcctttcccaagatagcacttaactctggtaaa
tatttcagtctctatgatgatgaaccattacgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_59313074_59313921
seq2: B6Ng01-240H16.b_42_889

seq1  GAATTCTGGGATGGACAGCCAGGGCCACACAGAGAAACCCTGTCTGGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGATGGACAGCCAGGGCCACACAGAGAAACCCTGTCTGGAAA  50

seq1  AACAAAGCAAAACAAAACAAAACAACAACAACAACAAACCAAATAAACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGCAAAACAAAACAAAACAACAACAACAACAAACCAAATAAACTC  100

seq1  ATAAAAAAACAACGCATTGTATACATCTCTTTGTAGGCAAGCCATCTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAAACAACGCATTGTATACATCTCTTTGTAGGCAAGCCATCTATA  150

seq1  ACCAGTTATGAAACAAACAAACTCAAATACTGACTAATACTCAGTGACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTTATGAAACAAACAAACTCAAATACTGACTAATACTCAGTGACAT  200

seq1  TAAATAAAGACTTTTGGGGCTAGAGCGATGATGGTTCAGTAGTTAAGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAAGACTTTTGGGGCTAGAGCGATGATGGTTCAGTAGTTAAGAAC  250

seq1  AAGTTTGGTTCCCAGCACCCAGATCAGGCATCTTACAACCACCTGTAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTGGTTCCCAGCACCCAGATCAGGCATCTTACAACCACCTGTAACT  300

seq1  CTGGCTTTCTGGGGATGTGACACCTCTGGCCTTCACAGACACCTGCACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTTCTGGGGATGTGACACCTCTGGCCTTCACAGACACCTGCACTC  350

seq1  ACATGATGTAGCCACATACAGAAGACACAGGCACGCACACACGTAGATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGATGTAGCCACATACAGAAGACACAGGCACGCACACACGTAGATAT  400

seq1  GCACGTCCTTATAAGTAAATTTCAAAAATATTTTAAAAGGATGGTTCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGTCCTTATAAGTAAATTTCAAAAATATTTTAAAAGGATGGTTCATT  450

seq1  TTGTATAAAGACATCATAATTCTTTAAAAATGATGGCAATAATCATTACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATAAAGACATCATAATTCTTTAAAAATGATGGCAATAATCATTACT  500

seq1  GGAATATATACAAAGGACATAGATCCTTGCAACCAAGGACAGAGGAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATATATACAAAGGACATAGATCCTTGCAACCAAGGACAGAGGAAAAA  550

seq1  TTTGAGAGGAGTTTGTGAGCCCCGTAGGAAGAGAGTTGCATGTATTAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGAGGAGTTTGTGAGCCCCGTAGGAAGAGAGTTGCATGTATTAAGA  600

seq1  TGGCATTTTCCTGTGTTTGCAAAAGGGGATGGGCTCAAAACAAAACAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTTTCCTGTGTTTGCAAAAGGGGATGGGCTCAAAACAAAACAAAA  650

seq1  ACCCCACCCCAAGACGAGAAGGTATTGGCAACTGATGGCTGCTGGTAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCACCCCAAGACGAGAAGGTATTGGCAACTGATGGCTGCTGGTAGAG  700

seq1  AAAGCTTCCATTAAATGACTCCAGAGGAGCTACCCACACTCCAGTGGATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTCCATTAAATGACTCCAGAGGAGCTACCCACACTCCAGTGGATG  750

seq1  GTCCCCCACACCCATCCATACACACAGCCCTAAATAGACTCAATGGGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCCACACCCATCCATACACACAGCCCTAAATAGACTCAATGGGTTT  800

seq1  AAGAACACAGGAAGTTGGGGGTGGAAGAGGGTAGAAGAGGAAATGGAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACACAGGAAGTTGGGGGTGGAAGAGGGTAGAAGAGGAAATGGAG  848