BAC Information

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BAC

Clone NameB6Ng01-240J19
Chromosome2 (Build37)
Map Location 173,875,859 - 173,876,291
singlet/doubletsinglet
Overlap genenone
Upstream geneCtcfl, EG619800, Pck1, Zbp1, Tmepai, 1700021F07Rik, 1700030G11Rik, LOC100043911, Rab22a, 1700010B08Rik, Vapb, LOC620189, LOC664880, LOC100043912, LOC664901
Downstream geneStx16, Npepl1, Nespas, Gnas, Th1l, Ctsz, Rpl30-ps5, Tubb1, Atp5e, Slmo2, LOC664967, LOC100043757, Edn3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-240J19.bB6Ng01-240J19.g
ACCGA050738GA050739
length1,203427
definitionB6Ng01-240J19.b B6Ng01-240J19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgatccatacctaaacataataaaagcaatatacaacaaacca
gtagccaacatcaaactaaatggagagaaacgtgaaacaatcctattaaa
ataagggactagacaaggctgctgacactctccctatctcctcagtatag
tactcaaagttctagccagagcaattagggatacaaattggcaaggaaga
agccaatatatcactatttgcagatgatataatagtatacttaagtgacc
ccaaaaattcttccagagaactcctacagctgataaacaacttcagcaaa
gtggctcgatataaaattaactcaaacaaatcagtagcctttctctactc
aaaggataatcaggctgagaaagaaattagagaaaatgacacctttcaca
atagtcagaaataagataaaatatcttggtgtgactctatttaagcaagt
gaaagatctctttgacaagaacttcaagtctctaaagaaataaatcaaaa
aagacctcagaagatggaaagatctcccatgctcatggagcagcaggatt
aacagagggaaaatggccatcttaccaaaatcaatctacagattcaatgc
aatccccatcaaaattccaacacaattcatcacagacatagaaagaaaat
ttctcaaatttatctggcataacaaaaaacataggatagagaaagctatt
ctcaataataagagaacttccggggaaatcaccatccctgacttcaaact
gtactagagagcaatagtgataaaaactaaatgatatttttacagagaca
gaaaggaaaataatggattagaattgaagatccagaaatgaacctacaca
cctatggtcacctgatctttgacaaagaagccaaaaccatccagtgaaaa
aagacagcatattcaacaaatggtgctggctcaagtggtggtctgcatgt
agaaaaatgcgaattgattcattcttattctccttgtagaaagctcaagt
tcaagtggatcaatgacctccacataaaccagatgcactgaaatctaata
gaagagaaatttggggaagaatcctttgacacataggttacagcaaattt
ctgagcagaaacatcagtgctcagctcttagatcccacttaatgacagtg
aaatgtcataaattagacctcctgtaggccagaaacactggttcacatca
ggg
agtgtttatgttatagacccagaggatgaagatgctggccttcagccccc
aaagcaactggggtatctctctcttggcaaatggcttcatgccacattac
aaaatcatccttctcaaggaagtgataagactgacaagtgtttagacttt
gccctaatttttcaagaggctgaagcagagatacttctctgaagctcttg
ggtcctggtttcaatttgctccgggtatctattgagcataaacagcccct
ttcatcatggcctgaaccatgaactgattcacagatgcccaaggctttat
ctcatcagatctcaatctcatggccgagtctctgtgagcaagggaggctg
tctgactggctagaaactccaggcctggatgggaagatgtcacatcttga
gatagtggggggctggagggggtgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_173875859_173876291
seq2: B6Ng01-240J19.g_66_498 (reverse)

seq1  CCCCACCCCCTCCAGCCCCCCACTATCTCAAGATGTGACATCTTCCCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCCCCTCCAGCCCCCCACTATCTCAAGATGTGACATCTTCCCATC  50

seq1  CAGGCCTGGAGTTTCTAGCCAGTCAGACAGCCTCCCTTGCTCACAGAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCTGGAGTTTCTAGCCAGTCAGACAGCCTCCCTTGCTCACAGAGAC  100

seq1  TCGGCCATGAGATTGAGATCTGATGAGATAAAGCCTTGGGCATCTGTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCCATGAGATTGAGATCTGATGAGATAAAGCCTTGGGCATCTGTGAA  150

seq1  TCAGTTCATGGTTCAGGCCATGATGAAAGGGGCTGTTTATGCTCAATAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTCATGGTTCAGGCCATGATGAAAGGGGCTGTTTATGCTCAATAGA  200

seq1  TACCCGGAGCAAATTGAAACCAGGACCCAAGAGCTTCAGAGAAGTATCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCGGAGCAAATTGAAACCAGGACCCAAGAGCTTCAGAGAAGTATCTC  250

seq1  TGCTTCAGCCTCTTGAAAAATTAGGGCAAAGTCTAAACACTTGTCAGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCAGCCTCTTGAAAAATTAGGGCAAAGTCTAAACACTTGTCAGTCT  300

seq1  TATCACTTCCTTGAGAAGGATGATTTTGTAATGTGGCATGAAGCCATTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACTTCCTTGAGAAGGATGATTTTGTAATGTGGCATGAAGCCATTTG  350

seq1  CCAAGAGAGAGATACCCCAGTTGCTTTGGGGGCTGAAGGCCAGCATCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAGAGAGATACCCCAGTTGCTTTGGGGGCTGAAGGCCAGCATCTTC  400

seq1  ATCCTCTGGGTCTATAACATAAACACTGAATTC  433
      |||||||||||||||||||||||||||||||||
seq2  ATCCTCTGGGTCTATAACATAAACACTGAATTC  433