BAC Information

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BAC

Clone NameB6Ng01-241F10
Chromosome2 (Build37)
Map Location 127,953,006 - 128,082,853
singlet/doubletdoublet
Overlap geneBcl2l11, LOC100043424
Upstream geneNcaph, 1700041B20Rik, 1810024B03Rik, LOC100043408, Ascc3l1, Ciao1, Tmem127, ENSMUSG00000074822, Stard7, Dusp2, Astl, Adra2b, A530057A03Rik, Fahd2a, Kcnip3, Prom2, Zfp661, Mrps5, Mal, LOC668892, Mall, Nphp1, 1500011K16Rik, Bub1, Acoxl
Downstream geneLOC100043729, LOC383791, LOC100043730, Gm355, Anapc1, Mertk, Tmem87b, 1600015H20Rik, Zc3h8, LOC100043735, LOC100043736, Zc3h6, LOC668894, Ttl, LOC100043738, Rpo1-2, Chchd5, LOC545461, LOC100043431, Slc20a1, A730036I17Rik, LOC671466
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-241F10.bB6Ng01-241F10.g
ACCGA051281GA051282
length1,1671,071
definitionB6Ng01-241F10.b B6Ng01-241F10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,081,697 - 128,082,853)(127,953,006 - 127,954,067)
sequence
gaattcagtctttggttgccaaaaacaaaaacaaaaacaaacaaacaaaa
cccttatatttagccagggacaccatatatcacattttggttttatctgg
ccatcattttcatagctgagccaagtcttattcaactgtggtcagagaat
ccacaatttgctttttgctctgagaacttgtttgcagttttctcggtatt
ccaggacactcgctctgttttctgcccctccccccagctctttccctttc
tacatatgtacacacgggcacacctttatgtgactatttaaaccttcatt
catccattcgtttataacacctccaagacctctgtgtttgcacaaaacct
gaccacactggtgtttgtgttgcttgtaatatgttctctatattgcattg
taacatccagagactcacaaaactgccctctctggtcttgtctgctacgt
aggccgttgcctgtcagacggttagcccttctatttgtaaatttcagctt
gagctacagtgcaaaattctgtctcaaaaacaaaacaaaacaaaaaacaa
aaaataaacaaacaaacacctttgaatctatactgaaaagctgtttttcc
tttgcttttagttcccaaacagcaatcctcacagcaaggctcagagcatt
cgcatctcccagcctctgtgagagctccagagatcacccaaaaggactcc
ttcctgcctgggacctttctatttatttatttatttagttagttagttag
ttagttagttaatgatctgggatctctctataaaatgggtacataaacca
gttgtgatagtgacacaagtagatacccctgaagaggcagaggcaggagg
atcgcaaactcaaggtcagcctggctacacattttaaaaaaaaagggggg
gggggggggccacaaatcaaacatttgctgtcaacaaatttacaaacccc
tttattctaaacatataatatgcatgtaattattggtaatttaggtaaat
taccatttactaaagatcaaggcaactttgcaatataatgagacgggatg
ttgcttgttagcttgcataaagaaacggaatcttggcctgatggggtgtg
gagcaccctgtagccatgactttgtaactggtcaagtgcagaagaaacgg
ctttaccaatgtataaa
gaattcccgcaaagcgcgcgccgtcccggcctggcccaggggtggggcgg
ggcgcaaagcgaagctgcccggccccctaagttccagccggagctgcggt
ggccggcacagtctgagcggcgctgggcggcgagtttgtcaacaatcgcc
ttgccttcggctgcctgacccgtaggcgccgcccccaccgcctctgccca
ttggttacgatggggagcgactgcgcgcgggccaatgggggagcactggc
agccggcgccaggggcgcagggctggcggtgcccgcgcggcggcgggagc
tgcgcgctaggggcggagcgggaggaggcggaggatgatcccggcggcgg
ccggtgcagcgcgggccagaggcgcggcgcgcgaaaccttcggctccccg
gcggagcgtggcggagggcggacgggcaggcgcggggccctggagcccag
gacccggctttgtttcccttgcctcctcggtggcgacgtgcaggggtcgt
tcgatcggcgcaacacgccgcgctcggaagggaaggggcggacgtgagtc
tcggcatggtggcccggggagggaaagagtcagccttgcgccgggtattg
ccaagaacgcgcagctaggtgtggaactttcaaagggatgtctcttaagg
cccctctttggaagtgtgcacattccggcaaggttgcacccgagagaagt
ggttttgtgtttggggtggcgcgcagggcagcagcagagggacctttgcg
gccgagggcgctcgacccgggcggagctgcgctcggagttacaaactcta
ttgtgacgcacttactacgactgacggccgctgccaaaccttctccagac
ttgctgccctcagcatttttcggcaaacaatggggcccgaagcagggagg
cggccagccgcctgcaatctctgcaatctgcgcccgctcctgtgctccag
cttccgcattctgagccagggaattagagagcccgcctgggaattttcag
actgattcagtttggtcctgagtaagcacgaaatgtagaacgttcccgcg
agcctcgcttcctcctaaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_128081697_128082853
seq2: B6Ng01-241F10.b_43_1209 (reverse)

seq1  TTTATACATTTGTGTAAAGCCCTGTTCTCTGCAC-TGA-CAGTCACAAAG  48
      ||||||||||   |||||||| | |  ||||||| ||| |||| ||||||
seq2  TTTATACATT--GGTAAAGCCGTTTCTTCTGCACTTGACCAGTTACAAAG  48

seq1  TCAT-GCTACA-GGTGCTCCACACCCATTCAGG-CAAGATTCCG-TTCTT  94
      |||| |||||| ||||||||||||||  ||||| |||||||||| |||||
seq2  TCATGGCTACAGGGTGCTCCACACCCCATCAGGCCAAGATTCCGTTTCTT  98

seq1  TATGCAAAGCTAACAGGC-ACAT-CCGTCTCATTAATATGCAAAGTTGCT  142
      ||||| ||||||||| || |||| |||||||||||   ||||||||||| 
seq2  TATGC-AAGCTAACAAGCAACATCCCGTCTCATTATATTGCAAAGTTGCC  147

seq1  TTGATCTTTAGTAAATGGTAATTTA-CTAAATTACCAATAATTACATGCA  191
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTGATCTTTAGTAAATGGTAATTTACCTAAATTACCAATAATTACATGCA  197

seq1  TATTATATGTTTTAGAATAAGGGGTTTTGT-AATTTGTTGACAGCAAATG  240
      ||||||||| |||||||||| ||| ||||| |||||||||||||||||||
seq2  TATTATATG-TTTAGAATAAAGGGGTTTGTAAATTTGTTGACAGCAAATG  246

seq1  TTTGATTTGTG---CCCCCCCCCCCCCTTTTTTTTT-AAATGTGTAGCCC  286
      |||||||||||   |||||||||||||||||||||| |||||||||| ||
seq2  TTTGATTTGTGGCCCCCCCCCCCCCCCTTTTTTTTTAAAATGTGTAG-CC  295

seq1  AGGCTGACCTTGAGTTTGCGATCCTCCTGCCTCTGCCTCTTCA-GGGTAT  335
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AGGCTGACCTTGAGTTTGCGATCCTCCTGCCTCTGCCTCTTCAGGGGTAT  345

seq1  CTACTTGTGTCACTATCACAACTGGTTTATGTACCCATTTTATAGAGAGA  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTGTGTCACTATCACAACTGGTTTATGTACCCATTTTATAGAGAGA  395

seq1  TCCCAGATCATTAACTAACTAACTAACTAACTAACTAAATAAATAAATAA  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGATCATTAACTAACTAACTAACTAACTAACTAAATAAATAAATAA  445

seq1  ATAGAAATTTCCCAGGCAGGAAGGAGTCCTTTTGGGTGATCTCTGGAGCT  485
      |||||||  |||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAGGTCCCAGGCAGGAAGGAGTCCTTTTGGGTGATCTCTGGAGCT  495

seq1  CTCACAGAGGCTGGGAGATGCGAATGCTCTGAGCCTTGCTGTGAGGATTG  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAGAGGCTGGGAGATGCGAATGCTCTGAGCCTTGCTGTGAGGATTG  545

seq1  CTGTTTGGGAACTAAAAGCAAAGGAAAAACAGCTTTTCAGTATAGATTCA  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTGGGAACTAAAAGCAAAGGAAAAACAGCTTTTCAGTATAGATTCA  595

seq1  AAGGTGTTTGTTTGTTTATTTTTTGTTTTTTGTTTTGTTTTGTTTTTGAG  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGTTTGTTTGTTTATTTTTTGTTTTTTGTTTTGTTTTGTTTTTGAG  645

seq1  ACAGAATTTTGCACTGTAGCTCAAGCTGAAATTTACAAATAGAAGGGCTA  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAATTTTGCACTGTAGCTCAAGCTGAAATTTACAAATAGAAGGGCTA  695

seq1  ACCGTCTGACAGGCAACGGCCTACGTAGCAGACAAGACCAGAGAGGGCAG  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTCTGACAGGCAACGGCCTACGTAGCAGACAAGACCAGAGAGGGCAG  745

seq1  TTTTGTGAGTCTCTGGATGTTACAATGCAATATAGAGAACATATTACAAG  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTGAGTCTCTGGATGTTACAATGCAATATAGAGAACATATTACAAG  795

seq1  CAACACAAACACCAGTGTGGTCAGGTTTTGTGCAAACACAGAGGTCTTGG  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACAAACACCAGTGTGGTCAGGTTTTGTGCAAACACAGAGGTCTTGG  845

seq1  AGGTGTTATAAACGAATGGATGAATGAAGGTTTAAATAGTCACATAAAGG  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTTATAAACGAATGGATGAATGAAGGTTTAAATAGTCACATAAAGG  895

seq1  TGTGCCCGTGTGTACATATGTAGAAAGGGAAAGAGCTGGGGGGAGGGGCA  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCCGTGTGTACATATGTAGAAAGGGAAAGAGCTGGGGGGAGGGGCA  945

seq1  GAAAACAGAGCGAGTGTCCTGGAATACCGAGAAAACTGCAAACAAGTTCT  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACAGAGCGAGTGTCCTGGAATACCGAGAAAACTGCAAACAAGTTCT  995

seq1  CAGAGCAAAAAGCAAATTGTGGATTCTCTGACCACAGTTGAATAAGACTT  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCAAAAAGCAAATTGTGGATTCTCTGACCACAGTTGAATAAGACTT  1045

seq1  GGCTCAGCTATGAAAATGATGGCCAGATAAAACCAAAATGTGATATATGG  1085
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCAGCTATGAAAATGATGGCCAGATAAAACCAAAATGTGATATATGG  1095

seq1  TGTCCCTGGCTAAATATAAGGGTTTTGTTTGTTTGTTTTTGTTTTTGTTT  1135
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTGGCTAAATATAAGGGTTTTGTTTGTTTGTTTTTGTTTTTGTTT  1145

seq1  TTGGCAACCAAAGACTGAATTC  1157
      ||||||||||||||||||||||
seq2  TTGGCAACCAAAGACTGAATTC  1167

seq1: chr2_127953006_127954067
seq2: B6Ng01-241F10.g_69_1139

seq1  GAATTCCCGCAAAGCGCGCGCCGTCCCGGCCTGGCCCAGGGGTGGGGCGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCGCAAAGCGCGCGCCGTCCCGGCCTGGCCCAGGGGTGGGGCGG  50

seq1  GGCGCAAAGCGAAGCTGCCCGGCCCCCTAAGTTCCAGCCGGAGCTGCGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGCAAAGCGAAGCTGCCCGGCCCCCTAAGTTCCAGCCGGAGCTGCGGT  100

seq1  GGCCGGCACAGTCTGAGCGGCGCTGGGCGGCGAGTTTGTCAACAATCGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCGGCACAGTCTGAGCGGCGCTGGGCGGCGAGTTTGTCAACAATCGCC  150

seq1  TTGCCTTCGGCTGCCTGACCCGTAGGCGCCGCCCCCACCGCCTCTGCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTCGGCTGCCTGACCCGTAGGCGCCGCCCCCACCGCCTCTGCCCA  200

seq1  TTGGTTACGATGGGGAGCGACTGCGCGCGGGCCAATGGGGGAGCACTGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTACGATGGGGAGCGACTGCGCGCGGGCCAATGGGGGAGCACTGGC  250

seq1  AGCCGGCGCCAGGGGCGCAGGGCTGGCGGTGCCCGCGCGGCGGCGGGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCGGCGCCAGGGGCGCAGGGCTGGCGGTGCCCGCGCGGCGGCGGGAGC  300

seq1  TGCGCGCTAGGGGCGGAGCGGGAGGAGGCGGAGGATGATCCCGGCGGCGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGCGCTAGGGGCGGAGCGGGAGGAGGCGGAGGATGATCCCGGCGGCGG  350

seq1  CCGGTGCAGCGCGGGCCAGAGGCGCGGCGCGCGAAACCTTCGGCTCCCCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGTGCAGCGCGGGCCAGAGGCGCGGCGCGCGAAACCTTCGGCTCCCCG  400

seq1  GCGGAGCGTGGCGGAGGGCGGACGGGCAGGCGCGGGGCCCTGGAGCCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGAGCGTGGCGGAGGGCGGACGGGCAGGCGCGGGGCCCTGGAGCCCAG  450

seq1  GACCCGGCTTTGTTTCCCTTGCCTCCTCGGTGGCGACGTGCAGGGGTCGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCGGCTTTGTTTCCCTTGCCTCCTCGGTGGCGACGTGCAGGGGTCGT  500

seq1  TCGATCGGCGCAACACGCCGCGCTCGGAAGGGAAGGGGCGGACGTGAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGATCGGCGCAACACGCCGCGCTCGGAAGGGAAGGGGCGGACGTGAGTC  550

seq1  TCGGCATGGTGGCCCGGGGAGGGAAAGAGTCAGCCTTGCGCCGGGTATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCATGGTGGCCCGGGGAGGGAAAGAGTCAGCCTTGCGCCGGGTATTG  600

seq1  CCAAGAACGCGCAGCTAGGTGTGGAACTTTCAAAGGGATGTCTCTTAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAACGCGCAGCTAGGTGTGGAACTTTCAAAGGGATGTCTCTTAAGG  650

seq1  -CCCTCTTTGGAAGTGTGCACATTCCGGCAAGGTTGCACCCGAGAGAAGT  699
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCTTTGGAAGTGTGCACATTCCGGCAAGGTTGCACCCGAGAGAAGT  700

seq1  GGTTTAGTGTTTGGGGTGGCGCGCAGGGCAGGCAGCAGGAGGGACC-TTG  748
      ||||| |||||||||||||||||||||||| |||||| |||||||| |||
seq2  GGTTTTGTGTTTGGGGTGGCGCGCAGGGCA-GCAGCA-GAGGGACCTTTG  748

seq1  CGGCCGAGGGCGCTCGACCCGGGCGGAGCTGCGCTCGGAGTTACAAACTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCGAGGGCGCTCGACCCGGGCGGAGCTGCGCTCGGAGTTACAAACTC  798

seq1  TATTGTGACGCACTTACTACGACTGACGGCCGCTGCCAAACCTTCTCCAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTGACGCACTTACTACGACTGACGGCCGCTGCCAAACCTTCTCCAG  848

seq1  ACTTGCTGCCCTCAGCA-TTTTCGGCAAACAATGGGG-CCGGAGCAGGGA  896
      ||||||||||||||||| ||||||||||||||||||| ||| ||||||| 
seq2  ACTTGCTGCCCTCAGCATTTTTCGGCAAACAATGGGGCCCGAAGCAGGG-  897

seq1  AGGCGGCCAGCCGCCTGCAATCTCTGC-ATCTGCGCCCGCTCCTGTGCTC  945
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGGCGGCCAGCCGCCTGCAATCTCTGCAATCTGCGCCCGCTCCTGTGCTC  947

seq1  CAGC-TCCGCA-TCTGAGCCCGGGAAAT-GAGAGCCCG-CTGGG-ATTTT  990
      |||| |||||| |||||||| ||||| | ||||||||| ||||| |||||
seq2  CAGCTTCCGCATTCTGAGCCAGGGAATTAGAGAGCCCGCCTGGGAATTTT  997

seq1  CAGACTTGATTCAAGTTTGTCCTGAAGGAAAGCACGAAATGTAG-ACG-T  1038
      ||||| |||||||  || |||||||  | ||||||||||||||| ||| |
seq2  CAGAC-TGATTCAGTTTGGTCCTGA--GTAAGCACGAAATGTAGAACGTT  1044

seq1  CCCGCGAGC--TGCTT-CTCCTAAAAC  1062
      |||||||||   |||| ||||||||||
seq2  CCCGCGAGCCTCGCTTCCTCCTAAAAC  1071