MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-241G07
Chromosome	2 (Build37)
Map Location	109,530,380 - 109,688,570
singlet/doublet	doublet
Overlap gene	Bdnf, LOC100043427
Upstream gene	LOC623003, LOC100043423, LOC623031, Mett5d1, Kif18a
Downstream gene	Lin7c, Lgr4, Ccdc34, LOC668797, Bbox1, 1110018M03Rik, LOC668799, Slc5a12, Muc15
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC623003 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623003
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	LOC100043423 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043423
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 513 ESTs, 7 Proteins

name	LOC623031 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623031
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 300 ESTs, 8 Proteins

name	Mett5d1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76894 MGI:1924144
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kif18a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228421 MGI:2446977
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bdnf (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12064 MGI:88145
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 4 mRNAs

name	LOC100043427 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043427
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 10 Proteins pseudo : _no_value

name	Lin7c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22343 MGI:1330839
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lgr4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107515 MGI:1891468
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccdc34 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68201 MGI:1915451
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668797 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668797
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 9 Proteins pseudo : _no_value

name	Bbox1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170442 MGI:1891372
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1110018M03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67606 MGI:1914856
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668799 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668799
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 21 ESTs, 7 Proteins pseudo : _no_value

name	Slc5a12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241612 MGI:2138890
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Muc15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269328 MGI:2442110
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043423 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250001 GeneID:100043423
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 513 ESTs, 7 Proteins product : similar to ribosomal protein L35a transcript_id : XM_001479943.1

name	LOC623031 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94367130 GeneID:623031
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 300 ESTs, 8 Proteins product : similar to Hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit transcript_id : XM_925749.2

name	Mett5d1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386229 GeneID:76894 MGI:1924144
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : methyltransferase 5 domain containing 1 transcript_id : NM_029790.2

name	Kif18a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21314851 GeneID:228421 MGI:2446977
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kinesin family member 18A transcript_id : NM_139303.1

name	Bdnf (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326462 GeneID:12064 MGI:88145
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : brain derived neurotrophic factor transcript_id : NM_007540.4

name	Bdnf (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326456 GeneID:12064 MGI:88145
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : brain derived neurotrophic factor transcript_id : NM_001048139.1

name	Bdnf (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326460 GeneID:12064 MGI:88145
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : brain derived neurotrophic factor transcript_id : NM_001048141.1

name	Bdnf (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326458 GeneID:12064 MGI:88145
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : brain derived neurotrophic factor transcript_id : NM_001048142.1

name	Lin7c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130071 GeneID:22343 MGI:1330839
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lin-7 homolog C (C. elegans) transcript_id : NM_011699.3

name	Lgr4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124430558 GeneID:107515 MGI:1891468
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine-rich repeat-containing G protein-coupled receptor 4 transcript_id : NM_172671.2

name	Ccdc34 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365417 GeneID:68201 MGI:1915451
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 34 transcript_id : NM_026613.3

name	Bbox1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:18485501 GeneID:170442 MGI:1891372
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase) transcript_id : NM_130452.1

name	1110018M03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13385775 GeneID:67606 MGI:1914856
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1110018M03 gene transcript_id : NM_026271.1

name	Slc5a12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51491855 GeneID:241612 MGI:2138890
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 5 (sodium/glucose cotransporter), member 12 transcript_id : NM_001003915.1

name	Muc15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802715 GeneID:269328 MGI:2442110
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mucin 15 transcript_id : NM_172979.2

name	LOC100043423 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250002 GeneID:100043423
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479993.1

name	LOC623031 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:82886628 GeneID:623031
definition	codon_start : 1 product : similar to Hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit protein_id : XP_930842.1

name	Mett5d1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229243 CCDS:CCDS16506.1 GeneID:76894 MGI:1924144
definition	GO_function : GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : methyltransferase 5 domain containing 1 protein_id : NP_084066.2

name	Kif18a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21314852 CCDS:CCDS16507.1 GeneID:228421 MGI:2446977
definition	GO_component : GO:0005874 - microtubule [Evidence IEA]; GO:0005875 - microtubule associated complex [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003777 - microtubule motor activity [Evidence IEA]; GO:0003774 - motor activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007018 - microtubule-based movement [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : kinesin superfamily protein 18A; N-8 kinesin product : kinesin family member 18A protein_id : NP_647464.1

name	Bdnf (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114326463 GeneID:12064 MGI:88145
definition	GO_component : GO:0016023 - cytoplasmic membrane-bound vesicle [Evidence IDA] GO_function : GO:0008083 - growth factor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006916 - anti-apoptosis [Evidence IDA]; GO:0007411 - axon guidance [Evidence IMP]; GO:0007412 - axon target recognition [Evidence IMP]; GO:0016358 - dendrite development [Evidence IMP]; GO:0007631 - feeding behavior [Evidence IMP]; GO:0048839 - inner ear development [Evidence IMP]; GO:0042490 - mechanoreceptor differentiation [Evidence IGI]; GO:0007406 - negative regulation of neuroblast proliferation [Evidence IDA]; GO:0021675 - nerve development [Evidence IMP]; GO:0008038 - neuron recognition [Evidence IMP]; GO:0045666 - positive regulation of neuron differentiation [Evidence IDA]; GO:0019222 - regulation of metabolism [Evidence IMP]; GO:0043523 - regulation of neuron apoptosis [Evidence IDA]; GO:0046668 - regulation of retinal programmed cell death [Evidence IDA]; GO:0001657 - ureteric bud development [Evidence IDA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; brain-derived neurotrophic factor; anorexia BDNF product : brain derived neurotrophic factor isoform 1 protein_id : NP_031566.4

name	Bdnf (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114326457 GeneID:12064 MGI:88145
definition	GO_component : GO:0016023 - cytoplasmic membrane-bound vesicle [Evidence IDA] GO_function : GO:0008083 - growth factor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006916 - anti-apoptosis [Evidence IDA]; GO:0007411 - axon guidance [Evidence IMP]; GO:0007412 - axon target recognition [Evidence IMP]; GO:0016358 - dendrite development [Evidence IMP]; GO:0007631 - feeding behavior [Evidence IMP]; GO:0048839 - inner ear development [Evidence IMP]; GO:0042490 - mechanoreceptor differentiation [Evidence IGI]; GO:0007406 - negative regulation of neuroblast proliferation [Evidence IDA]; GO:0021675 - nerve development [Evidence IMP]; GO:0008038 - neuron recognition [Evidence IMP]; GO:0045666 - positive regulation of neuron differentiation [Evidence IDA]; GO:0019222 - regulation of metabolism [Evidence IMP]; GO:0043523 - regulation of neuron apoptosis [Evidence IDA]; GO:0046668 - regulation of retinal programmed cell death [Evidence IDA]; GO:0001657 - ureteric bud development [Evidence IDA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; brain-derived neurotrophic factor; anorexia BDNF product : brain derived neurotrophic factor isoform 2 protein_id : NP_001041604.1

name	Bdnf (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114326461 GeneID:12064 MGI:88145
definition	GO_component : GO:0016023 - cytoplasmic membrane-bound vesicle [Evidence IDA] GO_function : GO:0008083 - growth factor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006916 - anti-apoptosis [Evidence IDA]; GO:0007411 - axon guidance [Evidence IMP]; GO:0007412 - axon target recognition [Evidence IMP]; GO:0016358 - dendrite development [Evidence IMP]; GO:0007631 - feeding behavior [Evidence IMP]; GO:0048839 - inner ear development [Evidence IMP]; GO:0042490 - mechanoreceptor differentiation [Evidence IGI]; GO:0007406 - negative regulation of neuroblast proliferation [Evidence IDA]; GO:0021675 - nerve development [Evidence IMP]; GO:0008038 - neuron recognition [Evidence IMP]; GO:0045666 - positive regulation of neuron differentiation [Evidence IDA]; GO:0019222 - regulation of metabolism [Evidence IMP]; GO:0043523 - regulation of neuron apoptosis [Evidence IDA]; GO:0046668 - regulation of retinal programmed cell death [Evidence IDA]; GO:0001657 - ureteric bud development [Evidence IDA] codon_start : 1 note : isoform 2 is encoded by transcript variant 3; brain-derived neurotrophic factor; anorexia BDNF product : brain derived neurotrophic factor isoform 2 protein_id : NP_001041606.1

name	Bdnf (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114326459 GeneID:12064 MGI:88145
definition	GO_component : GO:0016023 - cytoplasmic membrane-bound vesicle [Evidence IDA] GO_function : GO:0008083 - growth factor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006916 - anti-apoptosis [Evidence IDA]; GO:0007411 - axon guidance [Evidence IMP]; GO:0007412 - axon target recognition [Evidence IMP]; GO:0016358 - dendrite development [Evidence IMP]; GO:0007631 - feeding behavior [Evidence IMP]; GO:0048839 - inner ear development [Evidence IMP]; GO:0042490 - mechanoreceptor differentiation [Evidence IGI]; GO:0007406 - negative regulation of neuroblast proliferation [Evidence IDA]; GO:0021675 - nerve development [Evidence IMP]; GO:0008038 - neuron recognition [Evidence IMP]; GO:0045666 - positive regulation of neuron differentiation [Evidence IDA]; GO:0019222 - regulation of metabolism [Evidence IMP]; GO:0043523 - regulation of neuron apoptosis [Evidence IDA]; GO:0046668 - regulation of retinal programmed cell death [Evidence IDA]; GO:0001657 - ureteric bud development [Evidence IDA] codon_start : 1 note : isoform 2 is encoded by transcript variant 4; brain-derived neurotrophic factor; anorexia BDNF product : brain derived neurotrophic factor isoform 2 protein_id : NP_001041607.1

name	Lin7c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755973 CCDS:CCDS16509.1 GeneID:22343 MGI:1330839
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0045202 - synapse [Evidence IEA]; GO:0019717 - synaptosome [Evidence IDA]; GO:0005923 - tight junction [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006887 - exocytosis [Evidence IEA]; GO:0007269 - neurotransmitter secretion [Evidence IGI]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : vertebrate homolog of C. elegans Lin-7 type 3 product : lin 7 homolog c protein_id : NP_035829.1

name	Lgr4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124430559 GeneID:107515 MGI:1891468
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0016500 - protein-hormone receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0050673 - epithelial cell proliferation [Evidence IMP]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0030539 - male genitalia development [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA]; GO:0035239 - tube morphogenesis [Evidence IMP] codon_start : 1 note : G protein-coupled receptor GPR48 product : G protein-coupled receptor 48 protein_id : NP_766259.2

name	Ccdc34 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980878 GeneID:68201 MGI:1915451
definition	codon_start : 1 product : coiled-coil domain containing 34 protein_id : NP_080889.2

name	Bbox1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18485502 CCDS:CCDS16510.1 GeneID:170442 MGI:1891372
definition	GO_function : GO:0008336 - gamma-butyrobetaine dioxygenase activity [Evidence ISS]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016706 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors [Evidence IEA]; GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen [Evidence IEA] GO_process : GO:0045329 - carnitine biosynthesis [Evidence IEA] [Evidence ISS]; GO:0006118 - electron transport [Evidence IEA] codon_start : 1 note : gamma-butyrobetaine,2-oxoglutarate dioxygenase; gamma-butyrobetaine hydroxylase product : gamma-butyrobetaine dioxygenase protein_id : NP_569719.1

name	1110018M03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385776 CCDS:CCDS16511.1 GeneID:67606 MGI:1914856
definition	codon_start : 1 product : hypothetical protein LOC67606 protein_id : NP_080547.1

name	Slc5a12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51491856 CCDS:CCDS16512.1 GeneID:241612 MGI:2138890
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : sodium solute cotransporter; solute carrier family 5 member 12 product : solute carrier family 5 (sodium/glucose cotransporter), member 12 protein_id : NP_001003915.1

name	Muc15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794250 CCDS:CCDS16513.1 GeneID:269328 MGI:2442110
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : mucin 15 protein_id : NP_766567.1

name	LOC623003 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623003
definition	number : 5 pseudo : _no_value

name	LOC623003 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623003
definition	number : 4 pseudo : _no_value

name	LOC623003 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623003
definition	number : 3 pseudo : _no_value

name	LOC623003 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623003
definition	number : 2 pseudo : _no_value

name	LOC623003 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623003
definition	number : 1 pseudo : _no_value

name	LOC100043427 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250005 GeneID:100043427
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 10 Proteins product : similar to high-mobility group box 1 pseudo : _no_value transcript_id : XR_034482.1

name	LOC668797 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149249929 GeneID:668797
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 9 Proteins product : similar to lactate dehydrogenase 1, A chain pseudo : _no_value transcript_id : XR_002252.2

name	LOC668799 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250010 GeneID:668799
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 21 ESTs, 7 Proteins product : similar to ribosomal protein S3A pseudo : _no_value transcript_id : XR_002253.2

clone name	MSMg01-275A18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-545J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166E20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-428M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-195P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396H16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-366H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378I04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-354B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337J17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-122I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135K12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-541I06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-155A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-210L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202C19
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-241G07.b	B6Ng01-241G07.g
ACC	GA051317	GA051318
length	1,173	420
definition	B6Ng01-241G07.b	B6Ng01-241G07.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(109,530,380 - 109,531,572)	(109,688,143 - 109,688,570)
sequence	gaattcataacttcctataatgcacaggccattgatccatcttggctctg atgttcttcagtgaaagggaggggaaatttttatggcaaataggtaaatg tcacaagtctagtctcttactgtttgagtattaccacaatcacaaatcag aaagctttaaatactcaaaagtgggaagaagaagtctacttgctcaggtt tatctgaattggtacttgatcttctatccccaaatactcctgcctttctg gctccttctttttctcagtgaaaatgcaccacccactggaaaaggaagac acaagcatttatgtctatggtgtcaaaggagagtgagactaacaggatca gccatccaatcagagtctcagggtgaaagcatggttccaccctgaggaag tgctaacagggtaatgtaagttccatagtatagagatctgacataatatc tacctgagcagcaacacaggtgctagcaaagacatttgcttgcaacagag tttttggaaaagaagtaaattttaacaggttacaaaaccctgggggcaaa acccattcctaacaaatgtaaagttggaaagtagacatttgtttgaagct gatttaaaattatttaccttttaaaattgcaggtaggactcctccagtcc tttttaaagatataccagtagctttaaagattgtaatatagtcacttaag ttatgatgatagaagaaatcatggttatattcagcctataacctaggaag aaacagagggtctttaaggtggcccaagcctagcttcatgccctctatca tctgtgttgtaagatcctttgttttgatcacatgctccaccaagttgtca gtggggcaaagcgaactgtgagtgacactctgagagtgtgcatatatttg aatagcctgactatccagagcaacaatttgtaagggactctaaagtagct tgagttctgatgatttcccctttactgaagacaaaggtagatgagagcct ttctcgcttgagctttgaggtctttaggtggatctcctggtatttcttgg tgatacttatagtatgaatcttctgatcttcactataaaaacgagaaaag attctggttcagcaaggtttggaggcttcaaatgcattagtatcacttgt tacatcagggccttggtaatgaa	agttactatttccttgaaagtaagatgcttgtgtatatctgtaagcacaa aaatatgcccagtggtcctaaggtctgaccacactgtaaaatcaactaca gaacagcagcagcagcagcagtagtaggagcagcagcagcagcagcagta ataggagcagcacatcctatgttttccttactccagaggacttaagttga aactccagaagtattttattcagttgattctacaagaattgaagatttga acacacacacacacacacacacacacacagagagagagagagagagagag agagagagagggagagggagagggagagggagagggagagggagagggag agggagagagagagagagagagagtgagagagagagaagcatgtgagaag tcaggtgtggtgactcacac
quality values	Open. Hide. 58 31 29 25 58 41 30 62 54 62 62 62 62 62 62 62 62 62 62 62 47 54 62 62 56 47 62 62 62 47 44 62 59 59 28 28 46 29 22 59 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 59 59 62 62 62 59 62 62 59 62 54 49 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 49 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 47 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 54 58 58 58 58 54 58 54 54 58 58 58 58 58 58 58 58 58 54 54 58 54 54 58 54 58 58 58 58 58 58 58 58 58 58 58 54 58 58 52 58 52 58 54 54 58 58 54 52 58 58 54 58 58 54 54 54 58 52 58 58 58 54 58 58 58 58 58 58 58 58 54 52 58 58 47 47 58 58 49 58 58 54 58 49 49 51 51 46 58 58 50 58 50 49 58 58 51 47 58 58 58 58 58 58 51 52 53 49 45 45 46 51 58 58 58 54 58 58 48 54 58 50 51 58 58 41 27 58 50 50 58 58 41 47 54 52 47 58 51 46 49 58 50 58 58 39 40 58 58 50 50 58 47 52 53 29 49 39 50 50 58 39 36 54 50 58 51 52 52 41 41 50 50 49 50 58 58 49 40 27 49 49 42 53 40 50 50 50 50 49 41 52 52 53 41 51 53 58 51 47 58 44 52 41 21 58 41 37 51 46 42 49 49 51 40 52 53 39 46 53 53 36 54 37 52 52 42 41 52 46 29 41 41 32 44 40 54 44 22 39 54 34 32 53 37 39 54 51 28 42 40 42 32 42 53 41 35 40 51 44 35 52 38 32 27 45 46 37 46 7 34 42 45 32 52 54 37 40 31 42 46 17 54 47 32 45 39 53 52 32 38 12 44 33 39 38 31 52 40 25 39 32 52 53 32 40 26 37 33 35 35 29 40 52 32 49 52 42 42 31 32 31 36 31 31 42 42 51 31 42 30 40 40 29 31 33 30 31 26 31 32 39 51 46 46 25 46 51 42 35 29 31 32 34 42 29 31 43 42 31 31 37 31 42 42 24 36 31 42 32 40 30 42 31 36 34 42 46 37 40 31 33 47 34 32 41 31 41 31 27 31 37 29 30 39 24 32 36 34 21 14 27 43 43 31 30 39 21 41 22 30 32 25 30 31 31 31 31 38 32 42 48 32 31 33 33 33 32 32 32 36 35 42 26 27 31 32 36 30 31 29 22 35 11 31 21 22 25 15 22 31 48 29 24 23 24 4 5 21 14 19 19 32 24 31 26 48 30 34 25 25 22 30 23 22 30 24 20 30 13 32 21 31 34 27 24 24 17 43 25 12 33 39 11 26 43 22 14 16 26 29 21 11 3 5 6 6 28 22 6 5 3 7 6 5 3 5 4 4 4 5 3 8 19 40 20 27 24 24 16 28 16 13 20 14 6 28 32 34 18 13 28 13 30 9 20 16 38 18 3 4 5 5 17 15 18 13 5 6 4 10 7 7 17 4 6 6 24 5 6 5 11 8 3 2 3 3 3 3 11 9 7 8 6 3 4 3 10 20 7 10 11 9 15 10 5 7 6 5 1 2 6 6 23 9 6 11 24 4 7 12 21 30 20 15 10 4 6 6 23 30 30 5 5 14 8 11 4 4 5 17 8 10 13 16 5 8 9 6 13 5 5 3 9 5 1 2 5 6 18 8 14 5 2 15 16 5 13 2 3 2 3 10 6 6 3 3 1 1 4 17 10 10 9 11 9 7 5 7 11 5 5 4 4 12 7 2 5 6 3 1 5 5 4 13 5 18	Open. Hide. 46 62 62 59 62 59 43 46 31 32 32 32 32 48 48 49 54 59 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 59 59 62 59 59 62 54 62 62 59 62 62 62 62 62 62 62 62 59 59 59 62 62 62 59 59 59 59 62 62 62 54 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 47 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 49 49 58 58 49 38 49 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 39 38 38 49 58 58 58 58 41 33 26 49 58 58 58 49 49 58 58 58 58 49 49 49 43 58 58 58 44 58 40 44 37 40 40 41 32 42 31 28 23 40 26 48 34 10 10 12 16 20 26 30 13 21 13 18 9 14 12 19 13 18 17 30 13 26 15 18 13 15 11 9 9 9 8 14 16 27 13 16 9 10 9 13 13 10 13 9 6 9 14 24 25 9 26 15 10 15 14 9 9 21 15 15 14 25 13 6 12 13 15 12 13 11 13 12 9

Alignment Information

BAC End 1

BAC End 2

seq1: chr2_109530380_109531572
seq2: B6Ng01-241G07.b_48_1220

seq1  GAATTCATAACTTCCTATAATGCACAGGCCATTGATCCATCTTGGCTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAACTTCCTATAATGCACAGGCCATTGATCCATCTTGGCTCTG  50

seq1  ATGTTCTTCAGTGAAAGGGAGGGGAAATTTTTATGGCAAATAGGTAAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTTCAGTGAAAGGGAGGGGAAATTTTTATGGCAAATAGGTAAATG  100

seq1  TCACAAGTCTAGTCTCTTACTGTTTGAGTATTACCACAATCACAAATCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAGTCTAGTCTCTTACTGTTTGAGTATTACCACAATCACAAATCAG  150

seq1  AAAGCTTTAAATACTCAAAAGTGGGAAGAAGAAGTCTACTTGCTCAGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTTAAATACTCAAAAGTGGGAAGAAGAAGTCTACTTGCTCAGGTT  200

seq1  TATCTGAATTGGTACTTGATCTTCTATCCCCAAATACTCCTGCCTTTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGAATTGGTACTTGATCTTCTATCCCCAAATACTCCTGCCTTTCTG  250

seq1  GCTCCTTCTTTTTCTCAGTGAAAATGCACCACCCACTGGAAAAGGAAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTTCTTTTTCTCAGTGAAAATGCACCACCCACTGGAAAAGGAAGAC  300

seq1  ACAAGCATTTATGTCTATGGTGTCAAAGGAGAGTGAGACTAACAGGATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCATTTATGTCTATGGTGTCAAAGGAGAGTGAGACTAACAGGATCA  350

seq1  GCCATCCAATCAGAGTCTCAGGGTGAAAGCATGGTTCCACCCTGAGGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCCAATCAGAGTCTCAGGGTGAAAGCATGGTTCCACCCTGAGGAAG  400

seq1  TGCTAACAGGGTAATGTAAGTTCCATAGTATAGAGATCTGACATAATATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAACAGGGTAATGTAAGTTCCATAGTATAGAGATCTGACATAATATC  450

seq1  TACCTGAGCAGCAACACAGGTGCTAGCAAAGACATTTGCTTGCAACAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGAGCAGCAACACAGGTGCTAGCAAAGACATTTGCTTGCAACAGAG  500

seq1  TTTTTGGAAAAGAAGTAAATTTTAACAGGTTACAAAACCCTGGGGGCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGAAAAGAAGTAAATTTTAACAGGTTACAAAACCCTGGGGGCAAA  550

seq1  ACCCATTCCTAACAAATGTAAAGTTGGAAAGTAGACATTTGTTTGAAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATTCCTAACAAATGTAAAGTTGGAAAGTAGACATTTGTTTGAAGCT  600

seq1  GATTTAAAATTATTTACCTTTTAAAATTGCAGGTAGGACTCCTCCAGTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAAAATTATTTACCTTTTAAAATTGCAGGTAGGACTCCTCCAGTCC  650

seq1  TTTTTAAAGATATACCAGTAGCTTTAAAGATTGTAATATAGTCACTTAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAGATATACCAGTAGCTTTAAAGATTGTAATATAGTCACTTAAG  700

seq1  TTATGATGATAGAAGAAATCATGGTTATATTCAGCCTATAACCTAGGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGATGATAGAAGAAATCATGGTTATATTCAGCCTATAACCTAGGAAG  750

seq1  AAACAGAGGGTCTTTAAGGTGGCCCAAGCCTAGCTTCATGCCCTCTATCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAGGGTCTTTAAGGTGGCCCAAGCCTAGCTTCATGCCCTCTATCA  800

seq1  TCTGTGTTGTAAGATCCTTTGTTTTGATCACATGCTCCACCAAGTTGTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTTGTAAGATCCTTTGTTTTGATCACATGCTCCACCAAGTTGTCA  850

seq1  GTGGGGCAAAGCGAACTGTGAGTGACACTCTGAGAGTGTGCATATATTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGCAAAGCGAACTGTGAGTGACACTCTGAGAGTGTGCATATATTTG  900

seq1  AATAGCCTGACTATCCAGAGCAACAATTTGTAAGGGGACTCTAAAGTAGC  950
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AATAGCCTGACTATCCAGAGCAACAATTTGTAA-GGGACTCTAAAGTAGC  949

seq1  TTGAGTTCTGATGATTT-CCCTTTACTGAAGGACAAAGGGTAGAAGGAGG  999
      ||||||||||||||||| |||||||||||| |||||| ||||| | ||| 
seq2  TTGAGTTCTGATGATTTCCCCTTTACTGAA-GACAAA-GGTAG-ATGAG-  995

seq1  AGGCCTTTCTCGCTTGAGCTTTTGAGGTCTTTAAGGGTGGATCT-CTGGT  1048
        ||||||||||||||||| |||||||||||||  ||||||||| |||||
seq2  -AGCCTTTCTCGCTTGAGC-TTTGAGGTCTTTA--GGTGGATCTCCTGGT  1041

seq1  A-TTCTTGGTTGAATTACTATAAGGTATTGAATCTCTGGTTCTTCACT-T  1096
      | ||||||| |||  |||| ||  ||| |||||||   | |||||||| |
seq2  ATTTCTTGG-TGA--TACT-TATAGTA-TGAATCTTCTGATCTTCACTAT  1086

seq1  ATAAAACAGAAAGATTTCTG--TCAGCAGGTTTTGGAAGCTTTCAAATAG  1144
      | |||  |||||   |||||  |||||| | |||||| || ||||||| |
seq2  AAAAACGAGAAAAGATTCTGGTTCAGCAAGGTTTGGAGGC-TTCAAAT-G  1134

seq1  CAAATATTAGTAATTTCACTTTGTTAACCATCA-GCCCTTGGTAAATGAA  1193
      |    |||||||   |||| ||||||  ||||| | ||||||| ||||||
seq2  C----ATTAGTA---TCAC-TTGTTA--CATCAGGGCCTTGGT-AATGAA  1173

seq1: chr2_109688143_109688570
seq2: B6Ng01-241G07.g_63_488 (reverse)

seq1  GTGTGAGTCACCACACCTGACTTCTCACTTGCTTCTCTCTCTCTCTCTCT  50
      |||||||||||||||||||||||||||| ||||  |||||||||||| ||
seq2  GTGTGAGTCACCACACCTGACTTCTCACATGCT--TCTCTCTCTCTCACT  48

seq1  CTCTCTCTCTCTCTCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCC  98

seq1  CTCTCCCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGT  148

seq1  GTGTGTGTGTGTGTGTGTGTGTTCAAATCTTCAATTCTTGTAGAATCAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTTCAAATCTTCAATTCTTGTAGAATCAAC  198

seq1  TGAATAAAATACTTCTGGAGTTTCAACTTAAGTCCTCTGGAGTAAGGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAAAATACTTCTGGAGTTTCAACTTAAGTCCTCTGGAGTAAGGAAA  248

seq1  ACATAGGATGTGCTGCTCCTATTACTGCTGCTGCTGCTGCTGCTCCTACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGGATGTGCTGCTCCTATTACTGCTGCTGCTGCTGCTGCTCCTACT  298

seq1  ACTGCTGCTGCTGCTGCTGTTCTGTAGTTGATTTTACAGTGTGGTCAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTGCTGCTGCTGCTGTTCTGTAGTTGATTTTACAGTGTGGTCAGAC  348

seq1  CTTAGGACCACTGGGCATATTTTTGTGCTTACAGATATACACAAGCATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGACCACTGGGCATATTTTTGTGCTTACAGATATACACAAGCATCT  398

seq1  TACTTTCAAGGAAATAGTAACTGAATTC  428
      ||||||||||||||||||||||||||||
seq2  TACTTTCAAGGAAATAGTAACTGAATTC  426

BAC Information

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Search Result

BAC

BAC End Information

Alignment Information