BAC Information

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BAC

Clone NameB6Ng01-242K01
Chromosome2 (Build37)
Map Location 96,767,917 - 96,769,038
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100043267, Lrrc4c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-242K01.bB6Ng01-242K01.g
ACCGA052221GA052222
length1,092780
definitionB6Ng01-242K01.b B6Ng01-242K01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctcctaagagctggagactgtgagcacttggcctgggaatcgt
gagattttaacagaacaaaaaaggtggacattggggaaagcagatcccat
ctgtaggtctctgttcctgaactctgtaacttatcggtcctatggttcca
tggttttctccttatcagaagctaccgtcagtgttattggtcagctcaaa
tttcctgtatggagcttctcagtctacccaaggcttttagaaacttgacc
ctacagtttgagaacatcatacatacattcagtatgtttttattaagttt
actttcaattatttccacaccaatatctctcatacctctctcctctattc
cataccaacttcattctccagcttccttcttcacctcaacacacagcaaa
tatgtgtgtctgtgtagaatcttgcactagagagcacactgcattcttga
aaacagagttcctgttccagaagctctcaattgctgattgaatttcaaca
cgggttaagacatcataaccacctccacttctactgctggaagtttacat
cttggttgagctcattcaagtcttgcttgtgctgctacaatcactatgcg
ttcatattttaaatatcccacttttatcctaaaaaaaaaaaaaaaaacac
tgtcattgtagccgtctcttgcctttggctgttgcaaaatttctattccc
ttttccacagtgattcctgagccttgagagaaaagtgtttgaatagatgt
cacactcaggactgagaactccacagtctattatcccctgcctgcttagc
agttatagctctctgtcaatcagcatctgctcctaagagaagcatctctg
ataagagctgagagatgcactggtgtaagggtgcaatgtgaagtcattat
gagtcaatgtaaactaatacctgtagaaaataggtttggggccctcggag
ggactactcatggctgatggaaatagtataaatcattatttatttgttga
ttcatttctgctagtaacatctagctagtatgaatcaatatctcatgcat
gtggctgctagcttggccgaactttgtggtggttatggtggg
gaattctcagaaatttatgaaaatgacattagataagacgtaaacatatg
gggatagggatccagaattctgatagtggaattgagataccaacctggcc
acaaaacttagacacacaatttttcaggcctacaagttgtccagagttaa
aaaaaatggagcagaatttgagggaagggcaattaataactgccctagcc
tgagactgatgccatgagagggagactactgatgagactattaatgatat
tctgcaatacctgtagacaggtgcctagcataattgtcatcagagtacct
tcacccagtaacttatggaaattgatgcaatgacccatggacaaacttta
agtagagtattgggaattccatggaagagaaaaaggagtatttgaggatt
tgaggtgaaagggggttttaaaacagcacaagaaaaccaacagaatccac
taacctgggccaattgaggctgaactgccaaccagagagcatgcaagagg
tggacttaggctctctgcacatatgtacagctttgcagctggatattcat
gtgggattcctaaaactggaactggaactggagctgtctctgactacact
acctgcatttggattcctttcttctaactgggcggctttctcttccctaa
atagatgaagatgtgcctagtcttattgcaacttgatataacagtactgt
ttgatatccatgagaggcctcgcttttctgaagaatagaaataagggggt
ggagttgtgattgacaggggatgggaggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_96767917_96769038
seq2: B6Ng01-242K01.b_44_1135

seq1  GAATTCTCTCCTAAGAGCTGGAGACTGTGAGCACTTGGCCTGGGAATCGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCCTAAGAGCTGGAGACTGTGAGCACTTGGCCTGGGAATCGT  50

seq1  GAGATTTTAACAGAACAAAAAAGGTGGACATTGGGGAAAGCAGATCCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTTTAACAGAACAAAAAAGGTGGACATTGGGGAAAGCAGATCCCAT  100

seq1  CTGTAGGTCTCTGTTCCTGAACTCTGTAACTTATCGGTCCTATGGTTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGGTCTCTGTTCCTGAACTCTGTAACTTATCGGTCCTATGGTTCCA  150

seq1  TGGTTTTCTCCTTATCAGAAGCTACCGTCAGTGTTATTGGTCAGCTCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTCTCCTTATCAGAAGCTACCGTCAGTGTTATTGGTCAGCTCAAA  200

seq1  TTTCCTGTATGGAGCTTCTCAGTCTACCCAAGGCTTTTAGAAACTTGACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGTATGGAGCTTCTCAGTCTACCCAAGGCTTTTAGAAACTTGACC  250

seq1  CTACAGTTTGAGAACATCATACATACATTCAGTATGTTTTTATTAAGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGTTTGAGAACATCATACATACATTCAGTATGTTTTTATTAAGTTT  300

seq1  ACTTTCAATTATTTCCACACCAATATCTCTCATACCTCTCTCCTCTATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCAATTATTTCCACACCAATATCTCTCATACCTCTCTCCTCTATTC  350

seq1  CATACCAACTTCATTCTCCAGCTTCCTTCTTCACCTCAACACACAGCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCAACTTCATTCTCCAGCTTCCTTCTTCACCTCAACACACAGCAAA  400

seq1  TATGTGTGTCTGTGTAGAATCTTGCACTAGAGAGCACACTGCATTCTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTGTCTGTGTAGAATCTTGCACTAGAGAGCACACTGCATTCTTGA  450

seq1  AAACAGAGTTCCTGTTCCAGAAGCTCTCAATTGCTGATTGAATTTCAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAGTTCCTGTTCCAGAAGCTCTCAATTGCTGATTGAATTTCAACA  500

seq1  CGGGTTAAGACATCATAACCACCTCCACTTCTACTGCTGGAAGTTTACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGTTAAGACATCATAACCACCTCCACTTCTACTGCTGGAAGTTTACAT  550

seq1  CTTGGTTGAGCTCATTCAAGTCTTGCTTGTGCTGCTACAATCACTATGCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTTGAGCTCATTCAAGTCTTGCTTGTGCTGCTACAATCACTATGCG  600

seq1  TTCATATTTTAAATATCCCACTTTTATCCTAAAAAAAAAAAAAAAAACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATTTTAAATATCCCACTTTTATCCTAAAAAAAAAAAAAAAAACAC  650

seq1  TGTCATTGTAGCCGTCTCTTGCCTTTGGCTGTTGCAAAATTTCTATTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTGTAGCCGTCTCTTGCCTTTGGCTGTTGCAAAATTTCTATTCCC  700

seq1  TTTTCCACAGTGATTCCTGAGCCTTGAGAGAAAAGTGTTTGAATAGATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCACAGTGATTCCTGAGCCTTGAGAGAAAAGTGTTTGAATAGATGT  750

seq1  CACACTCAGGACTGAGAACTCCACAGTCTATTATCCCCTGCCTGCTTAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTCAGGACTGAGAACTCCACAGTCTATTATCCCCTGCCTGCTTAGC  800

seq1  AGTTATAGCTCTCTGTCAATCAGCATCTGCTCCTAAGAGAAGCATCTCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATAGCTCTCTGTCAATCAGCATCTGCTCCTAAGAGAAGCATCTCTG  850

seq1  ATAAGAGCTGAGAGATGCACTGGTGTAAGGGTGCAATGTGAAGTCATTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAGCTGAGAGATGCACTGGTGTAAGGGTGCAATGTGAAGTCATTAT  900

seq1  GAGTCAATGTAAACTAAATACCTGTAGAAAATAGGTTTGGGGCCCTCGGA  950
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GAGTCAATGTAAACT-AATACCTGTAGAAAATAGGTTTGGGGCCCTCGGA  949

seq1  GGGGACCTACTTCCATTGCTTGATGGAAATAGTATTAAATCATTTATTTA  1000
      |||   |||||  ||| || |||||||||||||| ||||||| |||||||
seq2  GGG--ACTACT--CATGGC-TGATGGAAATAGTA-TAAATCA-TTATTTA  992

seq1  TTTTGTTTGATTTCCATTTTCCTTGCTTAGTAACATTTTTGGCTTAAGTA  1050
      |||   ||||||  |||||    ||| ||||||||  | | |||  ||||
seq2  TTT--GTTGATT--CATTT---CTGC-TAGTAACA--TCTAGCT--AGTA  1030

seq1  TGAAATTCATATCTTCCATGCATGTGGCTGCTTAGTCTTTGCCCCAAACT  1100
      || |||  ||||||  ||||||||||||||| ||| ||| |  || ||||
seq2  TG-AATCAATATCT--CATGCATGTGGCTGC-TAG-CTTGG--CCGAACT  1073

seq1  TTGGTGTGTGGTTATGGGTGGG  1122
      || ||| |||||||| ||||||
seq2  TT-GTG-GTGGTTAT-GGTGGG  1092