BAC Information

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BAC

Clone NameB6Ng01-243I08
Chromosome2 (Build37)
Map Location 139,078,428 - 139,079,612
singlet/doubletsinglet
Overlap genenone
Upstream geneBtbd3
Downstream geneLOC628103, C130053K05Rik, LOC100043792, 5430433G21Rik, Tasp1, LOC672103, LOC269365, Esf1, 2310003L22Rik, Sel1l2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-243I08.bB6Ng01-243I08.g
ACCGA052882GA052883
length1,1911,184
definitionB6Ng01-243I08.b B6Ng01-243I08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaatggagatcacagaatcacaggggctgtactgggacactgct
tttacacatgaacttttgaccaagtgatttctctgtgtacgttttaaaat
atctgctaaatagagtttatgcatcaacatttctaggtgtttttgaagaa
tcttaaccaatgaatagccattggatacatggaattgaacatttggaata
ttgttcatccaaattgaaatatactgtaaatttagcacatagacttaatt
ctaaattcatgacagatttggtttattttttagcaaccattaagacaata
atactttagctatattatgttaaaatgttaaatttaagttttgtcctttc
attttttttctcagtttctccctcctttccttccttgagcccctcctttc
ctttatacatattcatttcttttcgtggaggtgagtgaatggagcccagg
aaactgagtacaaaatgtggcttatgtttttctagtagctctagtcatga
ctataggttcactactgtcacacttaagacaggttctgtttattcaattt
cacccaaaccacaaggagaaatagcagaaagaggtagaagtgtgattatt
tcttcttgcctccatctttcccaagatggtttatttcttgcctcctgtgg
ggtgcagaggtgaagctgtggaaagccacaggcgttctgttttggcttct
cccgtggacccttttcttgaaggacttgttttctctctcccttcagttgc
atatacctcactgtccattttcattctagctaagttccctttcaaatgct
tctctgcctttagaaaaatcccagacttattacctcttagactggtaaat
acgatatgggttaaaatttgtgtctcgaaatgcttgaccctggctggtgt
gattgagaagaaaatctgtgctgctaagctacacatagggaagactggtg
aagaaaaggacacccaaatttattatttagaaatactgttgctatatatt
aatgttatagagtgctgactatgtcagttaacatgattaataccaggcag
tgacaatagttcgatacattaccctcatttatcctagccacgaactattt
ttgtgcccattatttatccccatttacaaatgaagcacactgggcttgaa
cccttctctccagtcaccccattcacgcttaaaatttcaaa
gaattcagaactcttcagctggggaacagggtacccgtaagtatagcttt
acaaggtaagtctggccttgaactttctaacgaaattcaagacagtctat
cagaagtaaagtgggaaatagctttacaaggtatgtttgaacttgaactt
tttctagtgttaggagcccttttgttccttttcacatgttatcaagcggt
taaggcggggctgaaaattctggatgaaattcagggcaatctatcagaag
taaagcggggagagagagtaggagcaaagaggaaatatggttcacaaaat
aagtatacaggcctttccacaggtcttgaacctgaggaaaagtttaggtc
aggtaagaatacctggggagagattagaaggaaggagaaggaaaaagaaa
agaaaaaagatcaatcagtggaggtttctaggagaaggagcctatactca
tcactaggtgagctcaaggagccagttcttaatagttctgaatcagatga
aaaggctattagggcctggaaggcgctctcccgagcaggtgaagccactg
gacaactaacaaagatcgtccagggacctcaggagtcattctcagatttt
gtggccagaatgacagaggcagcagagcgtatttttggagattcagagca
agccgcacctctggtagaatagcttatttatgagcaagccacgcttgaat
gcagagcggccatagccccaagaaagaacaaaggtttacaaaactggctt
agggtttatcgggagcttgggggacctctcattatgcgttacttccattc
agtatgagaattttactagggtagctaatttgtcaaaaagtctttctcag
tatatgttacagaattggacggctgaatttgaacagacccttcgggaatt
gagaattgccatcattcaggtcaactccacgcgcttgggacctgtccctg
accaaaaggattacccaattggatctcctcagcattttcctttctttaaa
gatgggtatggggtggggattatttggagaatacactttgctgtggatag
gtatttccttctctggttggtctggtaagcttaagccaacctaagagaga
accaggtgtggtattgcgaaggccgttgcagcactagacatgggtgactc
cccgtgaattatatattgagttatcttcaatgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_139078428_139079612
seq2: B6Ng01-243I08.b_42_1232 (reverse)

seq1  TTTGAA--TTTAAGC-TGAATGGGGTG-CTGGAGA-----GGTCAAGCCC  41
      ||||||  ||||||| ||||||||||| |||||||     | ||||| ||
seq2  TTTGAAATTTTAAGCGTGAATGGGGTGACTGGAGAGAAGGGTTCAAG-CC  49

seq1  CAGTG---CTCATTTGTAAAATGGGGAT-AATAATGGCCAC-AAAATAGT  86
      |||||    |||||||| |||||||||| |||||||| ||| ||||||||
seq2  CAGTGTGCTTCATTTGT-AAATGGGGATAAATAATGGGCACAAAAATAGT  98

seq1  TCGTTGCTAGGATAAATGA-GGTAATGTATCGAACCTATTGTCAACTGCC  135
      |||| |||||||||||||| |||||||||||||| |||||||| ||||||
seq2  TCGTGGCTAGGATAAATGAGGGTAATGTATCGAA-CTATTGTC-ACTGCC  146

seq1  TGGTTATTAATCCATGTTAACTGACATAGTCAAGCACTCTATAAACATTA  185
      ||| ||||||| ||||||||||||||||||| |||||||||| |||||||
seq2  TGG-TATTAAT-CATGTTAACTGACATAGTC-AGCACTCTAT-AACATTA  192

seq1  ATATATAGCAACAGTATTTCTAAATAATAAATTTGGGTGTCCTTTTTCTT  235
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATATATAGCAACAGTATTTCTAAATAATAAATTTGGGTGTCC-TTTTCTT  241

seq1  CACCAGTCTTCCCTATGTGTAGCTTAGCAGCACAGATTTTCTTCTCAATC  285
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGTCTTCCCTATGTGTAGCTTAGCAGCACAGATTTTCTTCTCAATC  291

seq1  ACACCAGCCAGGGTCAAGCATTTCGAGACACAAATTTTAACCCATATCGT  335
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAGCCAGGGTCAAGCATTTCGAGACACAAATTTTAACCCATATCGT  341

seq1  ATTTACCAGTCTAAGAGGTAATAAGTCTGGGATTTTTCTAAAGGCAGAGA  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACCAGTCTAAGAGGTAATAAGTCTGGGATTTTTCTAAAGGCAGAGA  391

seq1  AGCATTTGAAAGGGAACTTAGCTAGAATGAAAATGGACAGTGAGGTATAT  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTGAAAGGGAACTTAGCTAGAATGAAAATGGACAGTGAGGTATAT  441

seq1  GCAACTGAAGGGAGAGAGAAAACAAGTCCTTCAAGAAAAGGGTCCACGGG  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTGAAGGGAGAGAGAAAACAAGTCCTTCAAGAAAAGGGTCCACGGG  491

seq1  AGAAGCCAAAACAGAACGCCTGTGGCTTTCCACAGCTTCACCTCTGCACC  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCAAAACAGAACGCCTGTGGCTTTCCACAGCTTCACCTCTGCACC  541

seq1  CCACAGGAGGCAAGAAATAAACCATCTTGGGAAAGATGGAGGCAAGAAGA  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGGAGGCAAGAAATAAACCATCTTGGGAAAGATGGAGGCAAGAAGA  591

seq1  AATAATCACACTTCTACCTCTTTCTGCTATTTCTCCTTGTGGTTTGGGTG  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATCACACTTCTACCTCTTTCTGCTATTTCTCCTTGTGGTTTGGGTG  641

seq1  AAATTGAATAAACAGAACCTGTCTTAAGTGTGACAGTAGTGAACCTATAG  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGAATAAACAGAACCTGTCTTAAGTGTGACAGTAGTGAACCTATAG  691

seq1  TCATGACTAGAGCTACTAGAAAAACATAAGCCACATTTTGTACTCAGTTT  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGACTAGAGCTACTAGAAAAACATAAGCCACATTTTGTACTCAGTTT  741

seq1  CCTGGGCTCCATTCACTCACCTCCACGAAAAGAAATGAATATGTATAAAG  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGCTCCATTCACTCACCTCCACGAAAAGAAATGAATATGTATAAAG  791

seq1  GAAAGGAGGGGCTCAAGGAAGGAAAGGAGGGAGAAACTGAGAAAAAAAAT  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGAGGGGCTCAAGGAAGGAAAGGAGGGAGAAACTGAGAAAAAAAAT  841

seq1  GAAAGGACAAAACTTAAATTTAACATTTTAACATAATATAGCTAAAGTAT  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGACAAAACTTAAATTTAACATTTTAACATAATATAGCTAAAGTAT  891

seq1  TATTGTCTTAATGGTTGCTAAAAAATAAACCAAATCTGTCATGAATTTAG  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTCTTAATGGTTGCTAAAAAATAAACCAAATCTGTCATGAATTTAG  941

seq1  AATTAAGTCTATGTGCTAAATTTACAGTATATTTCAATTTGGATGAACAA  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGTCTATGTGCTAAATTTACAGTATATTTCAATTTGGATGAACAA  991

seq1  TATTCCAAATGTTCAATTCCATGTATCCAATGGCTATTCATTGGTTAAGA  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCAAATGTTCAATTCCATGTATCCAATGGCTATTCATTGGTTAAGA  1041

seq1  TTCTTCAAAAACACCTAGAAATGTTGATGCATAAACTCTATTTAGCAGAT  1085
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAAAAACACCTAGAAATGTTGATGCATAAACTCTATTTAGCAGAT  1091

seq1  ATTTTAAAACGTACACAGAGAAATCACTTGGTCAAAAGTTCATGTGTAAA  1135
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAACGTACACAGAGAAATCACTTGGTCAAAAGTTCATGTGTAAA  1141

seq1  AGCAGTGTCCCAGTACAGCCCCTGTGATTCTGTGATCTCCATTGGAATTC  1185
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTGTCCCAGTACAGCCCCTGTGATTCTGTGATCTCCATTGGAATTC  1191